Pkot001097.1
Basic Information
- Insect
- Pachliopta kotzebuea
- Gene Symbol
- CSRNP3
- Assembly
- GCA_018246255.1
- Location
- DWLS01000330.1:20503-22626[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.9 2.7e+04 -4.5 2.5 96 102 45 51 14 83 0.38 2 2 6.5e-101 2e-96 322.9 7.4 3 218 186 393 184 393 0.92
Sequence Information
- Coding Sequence
- ATGGAGAAAAACAGTGAAAGAGAATGTTTACCTGTTCcaaacaatgaaaaaagtaGTGACATTGATGGTAACAGTGAGGACCTTAGTTCTAATGAtgaacaaaacaatataaatagtcACTCTCAGTTTTATGAGAGTAGTGAtagcaaattaaattatgctGTAAAAATAGATGACAATGATACTTTAAGTGACATAGATGATATTAAAACGGATACTGCCTCAGCTGATAGTGAAGATTCTGCGCTTGGTAGCTTGCCACCGGATGGTGGACTAAATGATGGAGAAGAAGAGGTCCAGGATAGATCTGATGGCAGTGATTGTGGTCTAGGACCAGAAACTAGTTACAATGCAGAgtcaacaaaatttaacatatctCTACCATGTACCAGTGGTTTGCAAAATGAAAACCCAAATGTAATAGCAGATAGTTCTCATTTTAATACCAATACTAGTGgtgttatttgtaataaacaatttaaaacaccCAACAAAAGTAATCTTAAAAGGAAATTAGACTATAGTGATATTGATGCACCTCAAGAAAAAAGGGCAAAGTTGAGTATACATTTTGATAATGtaactgtattttattttcctaGAGCCCAGGGTTTCACATGTGTTCCATCACAAGGTGGATCTACTCTGGGAATGGAATGGCAACACACACATGTACAGAAATTTACTTTAGCTGAGCATGCACTAGAACAAAGAAGATTGCATAGGCAAATTTTACAACAGATAAAGAATGAACGCCATAATTTGCAAGGAATTGCTTTATCCTCAAGTGATGAAAGTGATACAGAAGAAGAGACCAGTGACATTTCTGAATCTGAATTGGACCTTGATAGCTACTATTTTTTGCAACCGGTACCCACACGTCAAAGGAGAACTCTCTTACGTACTGCCGGTGTTAGGAAAATTGAAGCTTATGAAAAAGATGAGTGTAGAGACATAAGAACCTCACGTGAGTTTTGTGGCTGTGCTTGCAAAGGAACATGTAATCCAGAAAATTGTTCTTGTAGTTTAGCTGGGATAAAATGCCAAGTTGATAGATTGAACTTTCCATGTGGATGCTCAAGAGATGGCTGCTGTAACCCCACAGGTAGAATAGAATTCAACCCCATTAGAGTAAGAACACATTTCATAAACACTCTGATGAGACTAGGCCTTGAAAAAAAGAGTGACGAAAACCAAGAAGTTGTTAAAAGACAATGGGCAGAAGCATACAATGCTAGAAGCACCAGTTGCCTTAACACAACCTATGAGAGGGAAAGGTGTTTAAATCATGAAGATGGTCTACTACGTGATGTGAACTTAACACCAAGAGTGGAAGTGGAGTCATGTGTCAATTCAGGTAGtttcaataatatacattgtgATGCTAATGGCACTGTTAGAGAGGATGTAACTACATACAGTTACAGAAATAATACAGCTGGCCAGATGTGTATACCAGATAACACTTTGCAGCATTTTGATGACAAAAATAACCATCTGGATCATACTCCACACACATCAAATATGCTCCAAGGCAAAGGTCCACCTTATACAACAACAAATGCTATGGCATTTAGTACAATGTCTAACATGCACAATATTCCCTGTGATCTCAATTATGTATATGAACAGCACTCTGAAAACCATCAGTTCAAAGGTCTGCCTAGTTTTTCTGCATCTAGTTTTGAAGAATTTGCCAACAGCTCTCAAATGTCCATGTACAATCACTATAGCCATTTATACATGCCTGAGTACATGCACAAACCAAACACAAGTTTATCTGGGCATAGGTCTATTCCTTATCATCTCATGACTCAAAACCATTATgagatttataaaagtaattctGAATGTATCAATATTGATAGTAAAAATGAGTCTCATTACACCACATTAATGACTTCATAtcaaaatggaaataaattgCAAACAGTAGAAAATGATGAAAATTGGTTTAGTCACAACACTTTAATGAATCTTGACCATGGTGATCAGACCATCGAAGAAGGTTCTAACGCACAGCAGAAGCCTGCAGAAACTGCAGCAGAAAGTGATACAACAGAAGCTACAGAGAACTTTGGggaacttataaaaaaaacaatggtaGAATCTGTTACGGTGTAG
- Protein Sequence
- MEKNSERECLPVPNNEKSSDIDGNSEDLSSNDEQNNINSHSQFYESSDSKLNYAVKIDDNDTLSDIDDIKTDTASADSEDSALGSLPPDGGLNDGEEEVQDRSDGSDCGLGPETSYNAESTKFNISLPCTSGLQNENPNVIADSSHFNTNTSGVICNKQFKTPNKSNLKRKLDYSDIDAPQEKRAKLSIHFDNVTVFYFPRAQGFTCVPSQGGSTLGMEWQHTHVQKFTLAEHALEQRRLHRQILQQIKNERHNLQGIALSSSDESDTEEETSDISESELDLDSYYFLQPVPTRQRRTLLRTAGVRKIEAYEKDECRDIRTSREFCGCACKGTCNPENCSCSLAGIKCQVDRLNFPCGCSRDGCCNPTGRIEFNPIRVRTHFINTLMRLGLEKKSDENQEVVKRQWAEAYNARSTSCLNTTYERERCLNHEDGLLRDVNLTPRVEVESCVNSGSFNNIHCDANGTVREDVTTYSYRNNTAGQMCIPDNTLQHFDDKNNHLDHTPHTSNMLQGKGPPYTTTNAMAFSTMSNMHNIPCDLNYVYEQHSENHQFKGLPSFSASSFEEFANSSQMSMYNHYSHLYMPEYMHKPNTSLSGHRSIPYHLMTQNHYEIYKSNSECINIDSKNESHYTTLMTSYQNGNKLQTVENDENWFSHNTLMNLDHGDQTIEEGSNAQQKPAETAAESDTTEATENFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01176189;
- 90% Identity
- iTF_00249712;
- 80% Identity
- -