Pkot006616.4
Basic Information
- Insect
- Pachliopta kotzebuea
- Gene Symbol
- RCOR3
- Assembly
- GCA_018246255.1
- Location
- DWLS01003434.1:82-5110[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-10 1.5e-06 28.9 0.0 3 46 132 175 130 175 0.97 2 2 2.4e-11 3.6e-08 34.1 0.0 3 46 401 444 399 444 0.96
Sequence Information
- Coding Sequence
- ATGGTGTTGGCTGAAAGAAGCAGTGATGTTCGAAACGGGAAGCGATCGAGAGGGCCGAGCCCCAATGGCCATGGAAGTCCAGATTCAAGTTCAGAGGACGAAAACGTAGTACCATTTGCAGCCGAGAAAATCAGGGTGGGTCGTGATTACCAAGCGGTTTGTCCTGAACTGGAACCAGTAGAGCAAAGAAAACCTGAACAAATATCTGATAGAGCCTTACTGGTCTGGTCACCAACATCTGATATATCTGACATTAAATtggatgaatatataacaacagctaaagaaaaatatggtTATAATGGTGAACAAGCATTAGGAATGTTATTTTGGCATAAACATGATCTCAATCGTGCTTCTATGGACCTCGCAAACTTTACACCTTTCCCTGATGAATGGACAGTAGAGGATAAAGTGCTCTTTGAACAAGCCTTTCAATTTCACGGGAAAAGCTTTCACAGAATAAGGCAAATGTTACCTGACAAATCAATTGCTTCACTagttaaatactattattctTGGAAAAAAACTCGGTCACGCACATCTCTAATGGATGTTGTCGGTGAAGGTCGTAATGCAACTAGTTCAGGTACGGGCAAAAGAGAATCTGGGGCAGGCTCAGAGCCTGGTGGATCTGATAAAGAGTCAGATAATGATGAAAAGAAGTGGACTATCCACCGAGGTATTGTCCGAGGGGGCAAGTCCTTTGCGGCAGGTGGTTCCTCGCTTCGCACAGGACAGCAGGGCGAGGGCGAGGGTGGCAGCGAGAGTCCGGGAAAGTGGTGCACCGTTTGCGGCATTCTGTGCACACAAACGACGGCGCACAACTCGCAGAAGTTGTGCCAGGCATGCCTCGTGCACGCCAGACGCACCGGAACAATGAGGCCGCTCTGCGGTCCATCGGGGCGACGCGGACCAGGCTCGAAACAACAGCGATACAAGCATCGTTTGCCGCGAGGCATTTACATCAATCATGATGATCTCGTCGCCATGGCTACCGGTCCACAGCCCGGCGACACACCGCAGCCCGGCCTTATCAATCAGGGCGAAGCCATGCTCATAGCGATGGACAGAGAGATTATATCGCTCAAGAGACAAGTTCAGCAAAATAAGCAACAGTTAAGTGCTATGAAACGCAAGGTTGGCGATGCAGGAGTGGAGGAACTGAGACCTGGGGAGCCGCCCGCAAAAATTAATTCGCGTTGGACTAACGATGAGTTACTTATGGCTGTTACGGCGGTTAGGAAGTATGGCAAAGATTTTCAAGCGATTGCGGAGACACTTGGCACGAAAACGGAGGCCCACGTTCGTACTTTCTTCATATCCTACAGACGCCGATACAATTTAGACGCTGTATTGAGGGAACACGAGGCAGATCGCGGGAACGCTAATCACATACAATCAGGTCAGTATAATCGACAAAACAATGTAAATGGAGtttag
- Protein Sequence
- MVLAERSSDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAVCPELEPVEQRKPEQISDRALLVWSPTSDISDIKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDVVGEGRNATSSGTGKRESGAGSEPGGSDKESDNDEKKWTIHRGIVRGGKSFAAGGSSLRTGQQGEGEGGSESPGKWCTVCGILCTQTTAHNSQKLCQACLVHARRTGTMRPLCGPSGRRGPGSKQQRYKHRLPRGIYINHDDLVAMATGPQPGDTPQPGLINQGEAMLIAMDREIISLKRQVQQNKQQLSAMKRKVGDAGVEELRPGEPPAKINSRWTNDELLMAVTAVRKYGKDFQAIAETLGTKTEAHVRTFFISYRRRYNLDAVLREHEADRGNANHIQSGQYNRQNNVNGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018116;
- 90% Identity
- iTF_00197313;
- 80% Identity
- -