Pkot025062.1
Basic Information
- Insect
- Pachliopta kotzebuea
- Gene Symbol
- -
- Assembly
- GCA_018246255.1
- Location
- DWLS01027263.1:1-3184[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-12 1.3e-08 35.9 0.0 2 89 94 165 93 165 0.91
Sequence Information
- Coding Sequence
- GACACATTCGAGTACCCCGAGCTGGAGGGCCACGAGTTCGTGTGCAACCACCTGGCGCCGCGGCTGAAGGGGCGGCCGCGGGGCAGGCGGCGCCGGCAGCGCTCGCGCTCCGCCTCGCGCTCCGACAGCGAGGAGCCTCCGCTGTACGACCCCCCGGGTCGCGGTCTCCTGCCACCACCTGGAGAACAGACTCCGCGCCGCCTGTCGCTGAGGAACGGGGGCCCGGAGAAGCAGAGCGAGGACGATACGGACGAGAAGTCGGAGGGTGAGAGCAAGGAGGAGCGCGAGTTCCTGCTAGAGCTGAGGAAGTTCTACCGCACCAGGAACGAGAGCTTCAAGACGCTCAAGCACCTGTCCCTGCGCGCCCTGTACTCGGGCGTGGCGTCCCGCGGCGGGTACGAGGCGGTGTGCCGCGCGCGGCTCTGGCGGGCGCTCAGCCCGGAGCGGCCGGCGCGCGCGCGCAGGCACTACGAGAGGTTCCTACTGCCCTTCGAGAACCACGAGAGGAAAAACGGCTCGCGGCTGCTCCACAAGATCGCCAACGGCCGCTTCGAGGAGCCGAAGACCATCGACACTATCGAGGTGCACGACTCGCCGCTGCGCGAGGTGGAAGCCCGCGCGGAGCTCCCCGAGAAGAGGCTCAGGACGCCGTCGCCGCGAGCGGACGCGCGGCTGCGGCTGGACAACGAGACCGGCGAGGTGATCAAGGCGGAGGACCTGGACGTTTCTTCCAAACCGGCAGAGGAACTCAACAGGGAGTTCCTGGACTCCCTGCCTAAGGAGGAGAAGTCTTTGAAGATTACCGTGAAGCCCGTGGAGATGCTGCTCGACGGAAAACTGATGGCGAAGGCGGCGGTGGAGGCCGATAGCGGCGGGACGGGGGGAGGCTTCCACCTTAACGAGCTCACGCAGAAACTGAGTTTAGGGAGTGTGGATGCAACGCTGCTGCACCAGCTGGCGGGGGAGAGGAGGACGCTGAACGGGCACATCGCTCCAGCGCCGGCGCCGCACCCAGCCCCGCAGCCACCACCCATCGACCAGGTGAGCAGCTCCAGTATAATGACATTGGTACCAGTGAAGAGTGAGGTGGATGATTATACACAGCAAGAGAGCATTGATACGTACGTATGTGATGGTGCAATGGAGACAGCTGGTCTTCATGTCCACTTAATCACTACCCTGGATATACACGACCAGGTCTTCCATAGAGAAGGGTTTATGAAAGCTGCTCAACCGCATCGTTCCATCCCCACCTACTTTTTATGGGTTCAGCGACTACCAAAGAAAGCTTGCGAGATCGGAGATCAGCGGAGCGCGCGGCCGGCGGGGCGAAGCTCCCTGCGCGCTGTGCGGGTGAAGCCCACCAGGCCGCTGGCTGCCGCAGCGGCGACACCTCCAATACCGCCGCTGAGGTCGGACTCCGCCTCGTGCTCCCCGCAGCCCGGCTCGCTCAACAACTTCGGCATCCACCACCCAACGCCCACGATACCGGGCGCACCGCCAGTGACACTGTCTTCGGTACCAGCCCCACCACCAGCACCTGCGCCCTCCGCTCACAGCGACGACGAGATCGTAGAGGTGCCTTACAAACCAAAAACGCCAGAGATCATAGACTTGGACGAGTACCCGGAGAGCCCGCAGGGCGTCAAGAAAAAGAAGCTGGACATCCTGAAGGAGCGGGGGCTGGAGGTGACCGCGGTGCCGGCCGCCTGGTCCGCGCCGCCGCCCCTCGCCGCCGCGCTCCCCGCC
- Protein Sequence
- DTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRQRSRSASRSDSEEPPLYDPPGRGLLPPPGEQTPRRLSLRNGGPEKQSEDDTDEKSEGESKEEREFLLELRKFYRTRNESFKTLKHLSLRALYSGVASRGGYEAVCRARLWRALSPERPARARRHYERFLLPFENHERKNGSRLLHKIANGRFEEPKTIDTIEVHDSPLREVEARAELPEKRLRTPSPRADARLRLDNETGEVIKAEDLDVSSKPAEELNREFLDSLPKEEKSLKITVKPVEMLLDGKLMAKAAVEADSGGTGGGFHLNELTQKLSLGSVDATLLHQLAGERRTLNGHIAPAPAPHPAPQPPPIDQVSSSSIMTLVPVKSEVDDYTQQESIDTYVCDGAMETAGLHVHLITTLDIHDQVFHREGFMKAAQPHRSIPTYFLWVQRLPKKACEIGDQRSARPAGRSSLRAVRVKPTRPLAAAAATPPIPPLRSDSASCSPQPGSLNNFGIHHPTPTIPGAPPVTLSSVPAPPPAPAPSAHSDDEIVEVPYKPKTPEIIDLDEYPESPQGVKKKKLDILKERGLEVTAVPAAWSAPPPLAAALPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -