Basic Information

Insect: Pachliopta kotzebuea
Gene Symbol: JARID2
Assembly: GCA_018246255.1
Location: DWLS01011317.1:643-5179[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.5e-20 5.9e-17 62.6 0.0 7 89 134 213 130 213 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.5e-20	5.9e-17	62.6	0.0	7	89	134	213	130	213	0.92

Sequence Information

Coding Sequence: ATGGTTACAGTTCAACTTAATCCTAAACTGGAGTCAATAGAAATCTCAGGAGATGAAAGTGATACAGATTACAATGAACATGTAATCAAGCAAAATTTTCTAACTTCTAATCCATCTACACGAATCCATGAAGTGAATGAAGTGCGTTTTCCATTTCCACATGAGCCTGCACAAAAATTAGAAGCTCCTCAATTCTACCCTACAGATGAAGAATTTAGGgatccgattaaatattttattgatattatgcCAGTTGCTGCAAAGTTTGGTATATGTAAAGTTGTTGCTCCTCAAGGATTTAAGCCACAGTGTGTTTTTGATGACTCTGTTCGTTTTGCTGTCACCAATCAATACATATCCAGGTTATTTAAACGTTGGGGACCTGGTTTAAAGGAACTTTGCGCCATAAAGGCTTATCTGGCATCCCAAAGTGTCATCTTCAACAGGCCACCAttgCTTGATGGTATTGAGCTTAATTTACCTAAACTCTACTGCCTAGTCCAAAGCTATGGAGGACTCAGGAAAGTTATACAAAAGAAACGCTGGCCAAAAATAGCCGAAGAAATGAGACTCACAAAAACGCAAAAAATAGGGCATAAATTGgataaaatatatgtgaagTATATATTACCTTATGACACTCTTTCAGAAGATGAACGCAGAGAATTGATGAGTACTGTAGAAATCCATTGGGAGAAAAAATATCAACGGATGTTAAGACGAGCCCTGAAGCCTCTACATAGACAAAGACGGATATTAAGTGAGTCTGAAACATCAGAAGAGGAAGTTGAAGATGACATATATGTGACTGGTGCACTGAATGAGGCAGAAGATTGCATTACCAAAGGAAGACTCATGAAATTATCTACCTACAAAAAGgtAGCTGATAAGGCTGCAGAAACATTCCTTCAGAATTCAGATACTAAAAGTCCTGATGAAATAGAGGAAGGGTATTGGAAAATAGTTACTGAGGCAAAAGAGCATGTTTGTGTAAATAGTGCATCAATTGACACTGGCGAAGAAGGATATGGATTTACCAAAAATCAAAATGACTATTATGGCACTCATTCTTGGAACCTTAAGGTACTGAGCCAAAATGAGAACAATGTTTTAAAGTCATTAGGTTCAGTCCTTGGAGTAACTATTCCAACTCTACATCTGGGAATGGTTTTTTCAACAAGTTGTTGGCATCGGGATCCTCATGGACTACCATGGATAGAATATATGCACTCTGGTCCTGGAAAGATTTGGTATGGCATCCCCAATGAACAAAGTGATAATTTTCGCTTTGCTGTAGAGACTTTATGCCCCACGTCATgccaaaaaaaatcaatttggCTACCATCGGATATAGTAATGATCCCACCCAATCTGCTACTTGAACACAACGTATCTATATCTCGTGCAGTTCAAAAACCAGGCGAATTCATTATAGTCTTTCCAAAAGCATATTCGTGTTCAGTTTCAACTGGATATACAGTATCAGAAAGTGTCTATTTTGCACCGTACAATTGGTTGGATACagttgaaaaaatttttactGAATTAAGAGAAAGCTGTGAGCCAACTATGTTCTCAATAGATCAACTGCTCTTATCTGTGGCGCGCGACCCTCATGCTCCCGTTGAAGTGTTAAGCAAAATATTTCTGTCTTTGGAAAGAATAATACGCAGAGAGTTAGCCAATCGCCTTACTCTAGCGCGATATAAAGTCCAGgACAAGACACATCCAAAACGTGCGACGAATTCTCGAAAACGCCCCTCTGGCGCTTGGAATGTACGGGAACAAGAAGAATGCGGCATTTGTCAAACGACATTATATCTTTCCAGAGTGTGGGGTTTGACTGAAAAGAAACAATCTGTTTGTCTCCAACACGCTTTGGAACTGCTGAACAAGGATTTGAGGCGCACTCGCGACACCACAAACGTTGGACTGgaagtatttttaacagaaacaGAGCTGGAGAGACTTATTACTAACATACATAATAGGATACAAAGtgaatga
Protein Sequence: MVTVQLNPKLESIEISGDESDTDYNEHVIKQNFLTSNPSTRIHEVNEVRFPFPHEPAQKLEAPQFYPTDEEFRDPIKYFIDIMPVAAKFGICKVVAPQGFKPQCVFDDSVRFAVTNQYISRLFKRWGPGLKELCAIKAYLASQSVIFNRPPLLDGIELNLPKLYCLVQSYGGLRKVIQKKRWPKIAEEMRLTKTQKIGHKLDKIYVKYILPYDTLSEDERRELMSTVEIHWEKKYQRMLRRALKPLHRQRRILSESETSEEEVEDDIYVTGALNEAEDCITKGRLMKLSTYKKVADKAAETFLQNSDTKSPDEIEEGYWKIVTEAKEHVCVNSASIDTGEEGYGFTKNQNDYYGTHSWNLKVLSQNENNVLKSLGSVLGVTIPTLHLGMVFSTSCWHRDPHGLPWIEYMHSGPGKIWYGIPNEQSDNFRFAVETLCPTSCQKKSIWLPSDIVMIPPNLLLEHNVSISRAVQKPGEFIIVFPKAYSCSVSTGYTVSESVYFAPYNWLDTVEKIFTELRESCEPTMFSIDQLLLSVARDPHAPVEVLSKIFLSLERIIRRELANRLTLARYKVQDKTHPKRATNSRKRPSGAWNVREQEECGICQTTLYLSRVWGLTEKKQSVCLQHALELLNKDLRRTRDTTNVGLEVFLTETELERLITNIHNRIQSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00180231;
90% Identity: -
80% Identity: -