Pkot009892.3
Basic Information
- Insect
- Pachliopta kotzebuea
- Gene Symbol
- Arid4b
- Assembly
- GCA_018246255.1
- Location
- DWLS01006063.1:1-11254[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-30 1.2e-26 93.6 0.1 1 89 63 149 63 149 0.96 2 2 3.6 8.4e+03 -2.0 0.0 7 35 871 897 866 898 0.64
Sequence Information
- Coding Sequence
- TATACAGTGCCCAAAAAAGAAGCCCGCGAATTCCGTAAAGGCAGTGCACCTCTAGAATGGGCGGGTGTAGAAGCCGCCTTGCAGTATCTTAACAACGCCGTACTGCCACCGCACTGGGACCGCGATACACTCTTCAATGAACCAAGGAACACTTCTGATGATagCTCCGATGATGAACCGCGTGAGGAGAAAGATCATTTTGTGGCACAGTTGTACAAGTTTATGGATGACAGAGGGACCCCCCTTAATAGGAATCCTACAATTGCTAATCGAGATATAGATTTATATAGACTATTTCGTgtTGTTCAGAAGTTGGGTGGCTACAACCGTGTAACAAACCAAAACCAATGGAAGACAATCGCTGACAAAATGGGCTTCCATCCAGTGACCACAAGCATAACAAACCTTTGTAAACAAGCCTATAAAAAGTTTTTGCATAGCTTCGAGGACTTTTACCGCAAGTTGGGTGTGACGCTGGTAGCGCATCCGCGAGGCGCGCGCACGCCGCCTGCTGGCCGTTCTCTGATACGCGACCGCGACAAACACCCACCCACCTCCTCTTCCGCTTCCTCAACACCCACCGGAACACCTGCACAGCGCGGCAAAGAAAAAGAATCGGACAAAAGTGAAACAGAGAAAAGCGATAAGAGTGAAAAAGATGATAAAGTGGAGAAGATAGAAAAATTGAAAGAGAAGGTGGGCGCCAGCGACGAGGAAGATAGTGCCGATAATCAACCACTAATAGCTACTGCGCCCAAggttgaaaaagaaaaggaaaaagagaaagagaaagaaaaagataaggaaaaggaaaaagaaaaggaaaaggaCAAAGAAAAGGATAAAGAAAAAGACAAGGGCTCTTCAACCAGCACCAGTGATGAGAAGAGCGTGGTTAAGCGTCGCTCGCAGTCGAAGACGCGGAGTCACTCGGTCGCCAAAGCGGACACTCACGAAAAGCGGACGCCTAAAAGAAGACCATTCTTGTCGAAAaTGTGCGAAGGCGCGAGTACGGGCACACCTCGTGCATCGCGCAGACCGCACGCATCTACTGACAGCGATAGTTCAGGCCGGGCATCCAGATGCGGTCCAACGAAAAAAATGCAAAGTCGGCGCAGCCAGAGTGCAAATTCAGCAAGCAGTGGCAACACTATCGCCTCAAACAGTAGCAAGAGACCTCGTAAGAGAAAGAGTACCGAACCATCAATGAGTGAGTCTACTCGATCCGGAGGCGCCAATGTAAAGGCGCAGGTTGGCGATAAACTAAAAGTTTATTACGGGCCTACACAATCAGAGTCAAAGGTTACATACGAGGCGAAGGTTATTGAGATATCTTCCGGGGGCATGCTCCGCGTGCACTACACGGGCTGGAACACGCGCTATGACGAGTGGATCAAGCCGCAGCGCATTGCGCTCAACGTCACCCAGCACGATGCGCGCAACAAAAAAaaCACAAGTCTAAGCCGACGAGCAAGAACTAAAAGAACAGAAGatACCTCTGTTACAGAATCATCAGCGCGATCTGACACTGATAGCGATTCAGACAGCGATGACGATATTAAACCTCCATCCATAAAAACTGACGATAAAACTAGCACTAAAAGTACACCCAGGCCCAAAGAAACAAAATCTAGTGATAGCAGTGGTTCAAGTAAACCTCGTAAGAGACCTGCAAGAGCGATCTCAACACCGTCAACAGTTTCTCCTGCTAAAAAATCTCGAATTAATGTAACTGGTCATCAGCATCAAGGAAGAGACTTTGATCTTAATGAAATTCGATCTGAGCTGAAAGGACTACACACCGTAAAACAGGATACAGAAGAAGTCATCAAAAAAGAAACCCAGAAAGATAAAATTACAAGTCCCATTCAAATAACCATTCAAGCCCCTGAACCACCGCAACCTGAAAAACAACCTGAAGATGTATATGAATTCAAAGAACCAGAACCATTCGAAATCGAACTTCACGATGAGAAAAAGAAACGTACACATCGTATATTCGACGACATTTCACCAAGCAAGTATACGTCAACATTATCAAAATCTTTAAGTGAAGAAATATCTGAAGATCCTTTACGTCCGAGAACTTCCTCAATAAGGTCCCCATCTCTATCCCCTTTCAGAGACTTCGGTGCGACTAGAGACATAGCGGGACGACGGAGTCTTGAAGAAGATTCTAAAGATGGTCTCTTCTCACTTGACGATGATTCATGCCCAGGTGAAGGTAGTTCAGGTCCAATTTTTGAAGGATTTACTCCCGCTAAGAATCAAGAAACTTATTCTAAAAAGAGTAAAGTCAATAAGTTAAGAGAGTTGATAGATGATTCCCCTGATAGCCCAGCTGATGATGAGCAGTCCTCGGAGGACGAAAACGaggaaataaaagaagaaagtgAACCAAGTTCTGAAGTACCGATTCTTGAAATAACGGAAGTACCTGAACCAATCAAAGAAGAAATACAAGATGTTGAACCAGATAAAGAAGTTGTTATCGTTCTTACTGAACaacaaattttagatattccTATACCACCTAAAACTCCTCCTCTCCAAATTAAATTGGAATCTCCTCTTACCAATCACTTAGAAGTTATTCCTGAAAAATTTGTGGCTACAGTTACTACTGAAGTTAATgaagaaacaaataatacaatcCCTCTTATTAATGAAGAACAAATTCAGTTGCACTCGATTCCTTTGCCTGCCAATGAACCAAAAGAGAAGCaaaacatgaaattaataattgaaaaattagaaACAGAGCCTGTTATTTCCAAGTTAGAGCCACCATCTAGTCCTCTCATAGATACAGAAGAAGATAAATCGGAACCAGACAGTCCAGCACGCATCGACGTTCTTCCGGAACCACCGCCTGgctttttattacaatctgAAGGACCTAAAATTGCTGAAAAGCTTCTCAAAGCTATAAATAGCGCTAAAAGATTATCGATGTCTCCTCCTCCTTTAGAATCGTCTGACAGACCATTAacaccaaacaaaaatattttaatgctcAAAGAAGACAATAAACCGCCACCTAAATCTCCAGAAATTAAACCTCTGTCCAAACTAGAACCTCTAAAACCAATAACCAAGATCGAACCAATGAAGAAAATTAGTCCGCTTCCTATAACAGATTCTGTATTTGGAGAACCTTCTaactttattgatttaaatctgtctgatttaaagaaaattagaaaCAAGGAACCTACACCGCCGCGGTTGCAAAGTCCACTTAACATCTTGGAGAGGCGTAAAAGTGTCGCGGAACTACCACTCAGTGCACCTGGCAAAAACAATAAAGTCCTCAGCGATACTATACAAAAACTTTCCAGTCAAATTAACCAAGCTGCCGCCAACATTCCTCTCCCTCCTTTTCCACCCGGAGAGAGGAGTGAAACTAGTGACTCTGATGATTCAGatagaagGCTAATAATCGACAAAGTGTCGATGGACGAATGGGGCAACAGTGGCAGTAGCGAAGTGTCTGGTGCACGGGCGTTGCACGCGGGCAAATCGCCTGGTGAATGGAGCGCTGGCGAGTCTCTACTTATGCTTGAAGATGCTTGCAAGAACGAGAGGAAACACAGTGCAAGCGTAGTGGTAGCGGGCAGCGGACGGCAGATTGCCAGCACTGCAACAACTGCAGCAGTCACTTGTGCGGTTGCTGCAGAGGAGGACAGCAATATATCTCTGTTATTGTGCGAAGAGACAATCCCCGGATCACCCGCGCCTGACGCCGAGCCCGCACCTCCGCGACACAAGCATACATTACCGTTTGCCTGCGCGCCTCCACACCATTCTCATTCCAAAGTTGAAGAGCGTAGTAACGCGAGCGGGTCTCGAGAAGTGGGTGTGGCTGGTGTGGCTGCGGCAGGCGTTGCAGCAGTGGAGGCGGGGGGCGTGGCGCCCGCGGGCTGGGCGCGACGTCACGCGCTCCTTGACAATACACCGCCCACCACGCCCGACAGCAGCCTCGACTTATCGCCGCAACGAGAGCGACGAATATCAGAACGCGACAGTCCATCAGAACGGAAGGAAGACGATGACGACGCCCACGGTCACGGTTCCCCTGCTCATATGGACATGGAGAAACCACACCCGAGCCGCTCCCGCAAAGCGTCGGAGAGTTCTGCCGCTGGGCGAGGACGCACGCGGCGTTCGCGTCGTGACACGGACGAACACTCACACGTGCACGCGCATGCGCATTTATCTTCTGCGCACAGCGTGCATGCACATCAACCCTCTCTTAAGTGCAATTTTACCGTCGACCTAGGTATGTTACAATTATTATCCACTTAG
- Protein Sequence
- YTVPKKEAREFRKGSAPLEWAGVEAALQYLNNAVLPPHWDRDTLFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVQKLGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKHPPTSSSASSTPTGTPAQRGKEKESDKSETEKSDKSEKDDKVEKIEKLKEKVGASDEEDSADNQPLIATAPKVEKEKEKEKEKEKDKEKEKEKEKDKEKDKEKDKGSSTSTSDEKSVVKRRSQSKTRSHSVAKADTHEKRTPKRRPFLSKMCEGASTGTPRASRRPHASTDSDSSGRASRCGPTKKMQSRRSQSANSASSGNTIASNSSKRPRKRKSTEPSMSESTRSGGANVKAQVGDKLKVYYGPTQSESKVTYEAKVIEISSGGMLRVHYTGWNTRYDEWIKPQRIALNVTQHDARNKKNTSLSRRARTKRTEDTSVTESSARSDTDSDSDSDDDIKPPSIKTDDKTSTKSTPRPKETKSSDSSGSSKPRKRPARAISTPSTVSPAKKSRINVTGHQHQGRDFDLNEIRSELKGLHTVKQDTEEVIKKETQKDKITSPIQITIQAPEPPQPEKQPEDVYEFKEPEPFEIELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEISEDPLRPRTSSIRSPSLSPFRDFGATRDIAGRRSLEEDSKDGLFSLDDDSCPGEGSSGPIFEGFTPAKNQETYSKKSKVNKLRELIDDSPDSPADDEQSSEDENEEIKEESEPSSEVPILEITEVPEPIKEEIQDVEPDKEVVIVLTEQQILDIPIPPKTPPLQIKLESPLTNHLEVIPEKFVATVTTEVNEETNNTIPLINEEQIQLHSIPLPANEPKEKQNMKLIIEKLETEPVISKLEPPSSPLIDTEEDKSEPDSPARIDVLPEPPPGFLLQSEGPKIAEKLLKAINSAKRLSMSPPPLESSDRPLTPNKNILMLKEDNKPPPKSPEIKPLSKLEPLKPITKIEPMKKISPLPITDSVFGEPSNFIDLNLSDLKKIRNKEPTPPRLQSPLNILERRKSVAELPLSAPGKNNKVLSDTIQKLSSQINQAAANIPLPPFPPGERSETSDSDDSDRRLIIDKVSMDEWGNSGSSEVSGARALHAGKSPGEWSAGESLLMLEDACKNERKHSASVVVAGSGRQIASTATTAAVTCAVAAEEDSNISLLLCEETIPGSPAPDAEPAPPRHKHTLPFACAPPHHSHSKVEERSNASGSREVGVAGVAAAGVAAVEAGGVAPAGWARRHALLDNTPPTTPDSSLDLSPQRERRISERDSPSERKEDDDDAHGHGSPAHMDMEKPHPSRSRKASESSAAGRGRTRRSRRDTDEHSHVHAHAHLSSAHSVHAHQPSLKCNFTVDLGMLQLLST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01115494;
- 90% Identity
- iTF_00180225; iTF_00249495;
- 80% Identity
- -