Pkot006438.1
Basic Information
- Insect
- Pachliopta kotzebuea
- Gene Symbol
- Xbp1
- Assembly
- GCA_018246255.1
- Location
- DWLS01003289.1:3807-5409[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9 1.3e+04 -3.0 0.0 18 24 32 38 29 40 0.70 2 3 1.3e-17 1.9e-14 54.1 10.4 2 65 44 107 44 107 0.96 3 3 0.00029 0.42 11.4 1.1 32 55 88 111 88 114 0.91
Sequence Information
- Coding Sequence
- ATGAGTGCGCCGATTATCATCACCGTTCCCAACAACTACCTGGCGATGGAGGAGGTGGAGTCGCAGGTGATGGTCGACGTCGCGTCGCCATCACCTTCTAGGAAGAGGAGGCTCGACCATCTAACATGGGAAGAGAAAATGCAGCGCAAgaaattaaaaaatcgtgTCGCTGCACAAACCTCACGCGATAGGAAAAAAGCCAAAATGGATGAGATGGAGAGTCGCATCAAACATTTTATGGATGTGAATAAGAAGCTAATTAACGAAGTGGAGAGTTTGAAgGCGTTGAACGAGCGTCTGTTAAGTGAGAACACAAAGCTACGCAGTGAGGCGGCGGCTGGCAACGTCGCGGGAGCCCAGGGACCAGCGGAGTCTCATCCTCGGCAGAAGGACGGGCTCCCGGCGGCGATGCGAGCGGCGCGCCTGCTGCTAGCGATGTGCCTCTTGCAGACATCCTCGCACACCTCGACTCTGAAGAGTACCTCGATACCCTCCATCAACTTGCAAACTCCCTCCTCCAAGAGATTGATGCAAGTGCTGCAGGAGCGGCTGAAGATGTCGCGATCAGGGAAGACGGAGAATGTGTTAAAGGAGCTCAAGTGGTGGGGACCCCAACAAAGCAACTGGAATCCAGTAAAAGTGGAAGCGTAG
- Protein Sequence
- MSAPIIITVPNNYLAMEEVESQVMVDVASPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKHFMDVNKKLINEVESLKALNERLLSENTKLRSEAAAGNVAGAQGPAESHPRQKDGLPAAMRAARLLLAMCLLQTSSHTSTLKSTSIPSINLQTPSSKRLMQVLQERLKMSRSGKTENVLKELKWWGPQQSNWNPVKVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491609;
- 90% Identity
- iTF_01154760;
- 80% Identity
- -