Basic Information

Insect: Oxytorus armatus
Gene Symbol: Bcl11a
Assembly: GCA_958009045.1
Location: OY253748.1:24439834-24462242[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.078 7.1 7.5 0.2 2 23 171 193 170 193 0.95

2 6 1.6e-07 1.5e-05 25.4 0.9 1 23 505 527 505 527 0.98

3 6 0.0005 0.046 14.4 0.3 2 23 548 570 547 570 0.97

4 6 6.5e-07 5.9e-05 23.5 3.2 2 23 776 797 775 797 0.97

5 6 2.1e-05 0.0019 18.7 2.5 1 23 803 825 803 825 0.99

6 6 1.1e-05 0.001 19.6 0.4 1 22 833 854 833 854 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.078	7.1	7.5	0.2	2	23	171	193	170	193	0.95
2	6	1.6e-07	1.5e-05	25.4	0.9	1	23	505	527	505	527	0.98
3	6	0.0005	0.046	14.4	0.3	2	23	548	570	547	570	0.97
4	6	6.5e-07	5.9e-05	23.5	3.2	2	23	776	797	775	797	0.97
5	6	2.1e-05	0.0019	18.7	2.5	1	23	803	825	803	825	0.99
6	6	1.1e-05	0.001	19.6	0.4	1	22	833	854	833	854	0.97

Sequence Information

Coding Sequence: ATGTGTATTCCAGTGATCATGGCATTACGGATGTATGGACCAATTTCGGAAACGTCGCAAGGTCCAGTCTTACCAGACACCGTCCAGTGCGGGGGTTGCCGAGCCTCCTATCCACTCGGTGAAATCGTACGTTTCATCGAGCACAAGGTAAATCACTGTCGGAGCAGTCTTCAGGGATGTCACAGTCCACCACCGGCCGCCGCTCACGAGGATTCCGATCCCGAGGACGCTCTCGCCCTGAAGACTTCCGACGCGGAAAAGTTGACATCGGTGCCGAGTATCTCAGCGCCGATTAACAAACGCTCGAGCAGAGTCGAGAGTCCACCAACGCCGCAGGGCAATAATACCGATGCCGGAAGTCCGATTGAGCTTAGAGCGAGCGCGAGCTCGACGCCCAAGAGACGAACCGAGATTAACGAGGAAACGGACAAGGAGGATTtgccgaaaaaattgaaaaccgaGTCCGTTGACGCGGACACTAATACCGTCAGTTCCGAACCGAGATGTCTGCAATGTACGCAATGTTCGCGACGTTTGACCTCAGCATGGGAGATGTTACAGCATGCCCAGAGTGTTCACGGTGCGAGACTCTATTCGTCATTTTCATCATCGGCAAACTCGTCCTCAAACACACCGGCGCCAAGTCCACCGACACCGACGCCTCTTCATtcccaacagcagcaacaacaacagcagcaacagcaacagcagcagcagcatcatcTAAGCCCGCCGAATCATCTGAATCTAAGTGGTAAATCGAGCGGTAGTTCATCGGCGGCGAACACATCGGGCGGTGGAACAAACACGAGCGGTGGTAGTAGCGGTAGCCGTCAACAGTTGCAATCGTCGGCGGCGTCGTTGGTCGGTGATCCATTGCACAGTTTCATAAGACTTCCGCAGCATCTCGAGCGAAGCTTTCCCCCGATATTTAGGCCCGATTTTCTCGCGTTAAATCCCCTGGCGAGCTATCGCGGTCTTCAGGATCTTCAAACGGCAACGAGAAATTTACAAAATCTCGGCGATCCGTTGCGCGGTATGGACGGTTTAAATCTCGGCGATTCCCTGGTAAGAAGTAGCCTCGATAGTCTAAATAACGCGAGGAATCTCGCAAATCTAACGGAATTGTCGCACGCCCGCGGTGTATTACCGGGACAGTCGCATCAGCCGCAATTAGAAGCGAACCTGGATTTTTATTCGGCGCGCCTAAGGAGCCTCGCTAACCCCTCCTTAGGCGCGGCTCCGACAAATCCAACCGCGACGCAAGCCGCACATTTGACCAACACCCAAATAACCCAACAGCAAACGAGCCAACGTCCGGTACCGTCGCCGAGTCCCGCGTCAACGTTGACCGCCAATATCGCGCTCGCCGGTaatcaaaaagaaaattcaccgCCCTGTTACACCCAGAGTCCGGTTGGTCATCACAACAATAACAATTCGACGGACAGCGAAAAGGCAAGTCCGCCAAGTGCCTCGACGCCCGTTATAATCGACCCTACCGAGACCGTTTACGCTTGCGAAATATGCGATAAGAAATTTAGGTTTCAGTCGAATCTCATTGTTCATCGGCGCAGTCATCAGGACAAGGATCGTCGTTACAAGCGCGACAATAATCACGAGGAGTCGGGCACGTCGACGAGATGCGAGATGTGCGACGTTGAAATATCGAATTTCGCGGAATTACGTAGACACATGAGAAAGGAACATCAGGACGTGTCGAACGTTAACGCGGCGAGTCCTCAGGGTAGCGTGGAAACGGTGCCGGACGATGGTTCGAGCTGCGACGAAAATATGGATCTGGACGAGACCGAGGAGAGCGAGTGTCAGAAGCGGGTCGGTGACGACGACACGGAGGAAAATACACCGGAGGATTTGAGCACGACACAGGGACAGAGCAGCGAGGAGAGCGTCGGTAGGGCCGAACAAAAACCCAGTCTAGTCGGTGATCTGATGGAAAAATTTGGTCTCAGCAATATAGCACAATATTCCGAGGCTTACAGACAGGCGTTGCAGGAGAATCATCGCGGTAGCTTTCTCAAAAATGATCCGACCGCCTGTCACACGAACAATTTGAATAACAACAAGGAAAAGGATAGCGCACTGTCGCCGACGAATTTCAACACAACGTCGACGGCGAATATATTTTCGGGTCAGGGCTTTCCGCGAACGGGTGGTCCGGATTTTGGTGGTCTCTGGCTGCCGAGTCCTCACTATCTCGAGAACAATGAATTTCGCAAAGTATCAAAAGCGACAACGTCGAATCTCGCGCTGCAGGGACTGCCGAGTCCGTTGCTGAAGAAAGAACGAAGTGGTCGCAACGACACGTGCGAATTTTGCGGCaaggtatttaaaaattgttcgaatcTAACGGTACACAGAAGATCGCACACCGGCGAAAAGCCGTACAAGTGCGAATTGTGCGCGTACGCTTGCGCCCAAAGCTCGAAGCTAACGAGGCACATGAAGACCCACGGCAGACAGGGAAAGGACACGTACAAGTGTCGTTTTTGCGACATGCCATTTTCCGTACCGAGCACCCTCGAGAAACACATGAGAAAGTGCGTTGTCGTTCAGCAAGGTCCGAAATTGGGTCTATCTTATCCGGTCAGTCAGGACGAGGATTCGTCGTTGAGCACCAAGGACACTTGA
Protein Sequence: MCIPVIMALRMYGPISETSQGPVLPDTVQCGGCRASYPLGEIVRFIEHKVNHCRSSLQGCHSPPPAAAHEDSDPEDALALKTSDAEKLTSVPSISAPINKRSSRVESPPTPQGNNTDAGSPIELRASASSTPKRRTEINEETDKEDLPKKLKTESVDADTNTVSSEPRCLQCTQCSRRLTSAWEMLQHAQSVHGARLYSSFSSSANSSSNTPAPSPPTPTPLHSQQQQQQQQQQQQQQQHHLSPPNHLNLSGKSSGSSSAANTSGGGTNTSGGSSGSRQQLQSSAASLVGDPLHSFIRLPQHLERSFPPIFRPDFLALNPLASYRGLQDLQTATRNLQNLGDPLRGMDGLNLGDSLVRSSLDSLNNARNLANLTELSHARGVLPGQSHQPQLEANLDFYSARLRSLANPSLGAAPTNPTATQAAHLTNTQITQQQTSQRPVPSPSPASTLTANIALAGNQKENSPPCYTQSPVGHHNNNNSTDSEKASPPSASTPVIIDPTETVYACEICDKKFRFQSNLIVHRRSHQDKDRRYKRDNNHEESGTSTRCEMCDVEISNFAELRRHMRKEHQDVSNVNAASPQGSVETVPDDGSSCDENMDLDETEESECQKRVGDDDTEENTPEDLSTTQGQSSEESVGRAEQKPSLVGDLMEKFGLSNIAQYSEAYRQALQENHRGSFLKNDPTACHTNNLNNNKEKDSALSPTNFNTTSTANIFSGQGFPRTGGPDFGGLWLPSPHYLENNEFRKVSKATTSNLALQGLPSPLLKKERSGRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCAYACAQSSKLTRHMKTHGRQGKDTYKCRFCDMPFSVPSTLEKHMRKCVVVQQGPKLGLSYPVSQDEDSSLSTKDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01454407;
90% Identity: -
80% Identity: -