Oarm000365.1
Basic Information
- Insect
- Oxytorus armatus
- Gene Symbol
- -
- Assembly
- GCA_958009045.1
- Location
- OY253744.1:5292875-5301403[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.038 3.4 8.5 0.6 3 23 434 455 433 455 0.93 2 13 0.42 38 5.2 0.0 2 19 492 509 491 509 0.95 3 13 2.2e-05 0.002 18.7 3.7 1 23 547 570 547 570 0.97 4 13 2.7 2.5e+02 2.7 0.6 1 23 583 606 583 606 0.90 5 13 0.00051 0.046 14.4 2.4 1 23 634 657 634 657 0.96 6 13 0.0061 0.55 11.0 1.2 1 21 663 683 663 687 0.91 7 13 0.064 5.8 7.8 4.9 1 23 700 722 700 722 0.95 8 13 1.7e-05 0.0015 19.1 0.2 1 23 766 788 766 788 0.98 9 13 2.4e-06 0.00022 21.7 0.6 1 23 794 816 794 816 0.98 10 13 0.0011 0.1 13.3 2.5 1 23 822 844 822 844 0.99 11 13 0.017 1.5 9.6 4.7 1 23 850 872 850 872 0.98 12 13 5.2e-07 4.7e-05 23.8 1.7 1 23 878 900 878 900 0.99 13 13 0.00048 0.043 14.5 1.8 1 23 906 929 906 929 0.96
Sequence Information
- Coding Sequence
- ATGCTGACGTTGATACTACAAACTCAGGAGGGACATCAGATCGAATTAAATGTTCAGCCGGATGATACTTTCGCGGATTTAAAGAGCCAGTATGCCGATCACGAAGTTGTTGGCCTGTCGCATTCACTTGAGCAGTTAATCACTAACGGTGCTAACGTAGCAgagaatatgaaaatatttgactACGTTACGGCCAGTgCTCAAGAATGGTACAGTACCGACACGGTGAATCAGCCTGCTACCGATCAGCCTgttgagacagaaaaaaaaattaaagaatgcTGCGCTCGTGATTGTACCAATAACGTAGCCACAACGCCTGGcaaatcattttttccattgCCTACAGACCACGTCAGgcTCTCCGTTTGTCTGATCGAAATAGGAAGACCTGATTTGTACAATCGAATTTTTCGTCCTGATACAGAAGAATgccaaaagtattttttatgcAATAGCCATTTCAACCAAGAATCCTCTTTAACTCTACAAGGTGCTGATGAACAGCTGCCAGTACTTAAGCCAAAAAACGATCGTCCAAAGTTGAATGTGATTGATGAAACGATTttaaccaaagaaaaaaaagtgaatgatAAACATCAGGAACTTGAGTGCGATGGCAAAGATTCGGAGCTCGGGTTGTTCGGTACGGATGAAAATATCGAACATCCCGGAATTCTTTGTCGCCTGTGCGGTAAAATTGCCGAAAATCCCATACACTTGTACGCCAAAGAAACTGTAAATATCGAGGACGAATTCAATCTGGCGGATAAGATTAATTTGTGCCTTCCCGTTACaATTACCGTTATGGATCCATTGCCAAAACAAATATGCCAAGATTGTCGCGTGAAATTGGACATTTGTCACGATCTCGCTCTTTCGTCTTTGCAGACAGAGGACAAATTGAAAGCGCTGTTGCGGGAGAACAGGCTGTGCGTGAACGTTAACGCAAAACAGCAGTGTCCTCTCTGCATCGAGGGTGACATGGGAATCGTAAAGAAAAGTGGAATATATCGAAGGGAAGAATTGAAAGatgatttatataaaaaaaagactgaTAACGAGGATACGAAGGATTTATCTTTGAGCGTTAAATTACACTTGCCAATATTGGATAATTCTGTTTCCGCACCGATGACGATCGAAAACGATCTCGAAGCTCAATCCTCGACCAATGATATTTCACTTTCACTGCCGAATGGTGAATTTTCATGCTCAATATGTTCCTCGAAAATCGTTGATTTTACGGCTATCAAAAGTCACGAGTGCCATCACGAGGATCAAATTTCATTTCGTAGTTgtgtaatttgtaaaaatacaaatttcacggataataaCGAGCTCGAAGCTCATTACCGTCGTCACGGTCTCGTTGATGACAAATTAAACGACGTATTGGAACGTTACACGAGCTTACAATTCGACAAAACGACTGATAATCCGAAAATGCATAATACCAAGAATTGCCAAATACGCTGTGAAAATTGTGACAAGATATTACCGAACgaggaaaaattgacaattcacGATTGTTCGCAAATCGCACACGACTTAGAAATATTTGAGGAACATTTTCTGGTGAAAACCGACCACGATGATCAGACAATCGAGCGCACTGGCAAAGAATCGAAAGTTCCTTACAATTGTCACTTTTGCGAGAAGCAATTTACACGAAAGGGAAGTCTCGAGAAGCACATAACGACCATGCACAACGGTCCATTGAACAATTTCATCGCGCCTCGATGTTACAAGTGTAAAAATTGTTGCGAGGCGTTCGCTCGTGAAATTGACGCGGAGACACACACGAGCCTGGCACATTTCGTCTCGTTCGCAAGTACGAATACGATATTCGAACATAGCGATGAATTTAACACCGAAGAATTGATCGCAACGTGTCTCTACGTTTGCGAATATTGCGAGCGTTGTTTCACAATACCGAGTTCTCTGCACGAGCATCGCGAATCCGAGCACATAAACAATCTCAAATATTCTTGTTTGATGTGCAACCAAACGTTCGATTCGCGTCGACAATTGGCAAATCACAAGAGTCTACGCTCTCATCGTAAACCACTCGACGGCTTGTCAATAAGACAATATTACGTTTGTAAATATTGCGACAAAACGTTTTTACATCATTCCCGTTACACGGCTCATGCTTtacaacatcgaaaaatcactgtGCCATATCTCTGCAGAATATGTAATTTAAATTTTCTAACTTATCGCGAGATTGCGTTACATCGCAAGATATCTCATCCGTACCAATCGGCCCTTCACGAGAGAACAAGTTTTACGTATAATTGTCAATATTGCCGGAAGGAATTTGCTCAAGAGGTTGCACTGATTAAACACATAAGAGTGCACACGGGTGAACGTCCTTACAAATGTACGATATGCGACAAAGGATTTTCCCAGAGTTCGGGTCTCTACACCCACTTGACAATTCATTCGGATCTGAGACCATATACATGCACAAAGTGTCCGCGTGCATTCAAGATGAAGCGCGATCGCGACAGACATATCAAACGACACGCCGGTAATCGTCCTTACAAGTgtgaattttgcaaaaaagcatTCATGACACAACACGTTTACAGTCAACATCGGAAAATTCACACCGACGAAAGACCGTACAAGTGTGATATTTGCGGTCAAGCGTTTCGACGATCTCACGTACTTACCGTTCACATGAGAAGACACACCGGCGAGAAACCTCATGTTTGCGAGATATGCCTAAAGAGTTATCGACAACGAGGCGATTATCTCAAACATCAGAAGATACAGCATGGAATATGTTATGTCACCGTTGCTCCAAAATTCGATTGTCCGAGcttgaatatcgaaaaatccGATATACCAATAAACAGTACCAGCAACAAAATCAATGAGTCTATCTCAAACAATACGATTCATTGGCAATTATCACAATGGTGTCGTAGCACAAAAAATGATGAGATACGAGCTCAGGATTTGTtgcaaataatgaaatattgcgACGGCGAAAATAACACAACTGATTCCACCGGATTGGCTTTGTTGCGTTGTTGTCATATGCTGGTCAATGTCAAACTATCCAATCGTCGTCATTTGACCGATCAAACATGGAatctgatagaaaaaaatgtatccgtaCCAACGTTGGAACACTACAACACTTTGTTGAGCGTTTACGTGAGAACCTCAGAGACTgtcgatgtaaaaaaatttctcaacagTATGAGAGTAGAACCGGATGTTGAGACTCATCGACTCTTGTTGGACTGTGTGGCCAAGAGCGGAGATGTCGAATCTACCCTTTACGTGCTGtcgctgatgaaaaaaaatggatactcCCTGAACGAGGGAATTTTCAATTCTCTCATTGAGGCTTATGCGACGAGCGGTGATGTCAAATCTGCACTTAAGAATATCAATACAATGATGCAGTCGGGGATACCGCCTAGTACTCAAACTTGGTCAATTATCGCTTGCGGCTATGCCAAAATCGCTGATATTTCCCGTATGATGGAGATTCTAAATTCTCACTCGCCGAGCCTCGAGCAAATACTCGAAATTGCCAAATTCCTCAGTCTATCCGGTCACGTCAGTCATTTACCTAAAGTATTGAAATTTTTGACTTCCGACATggatttaaataattcaacggtCAACGAGACAATAACAGAACTGACGCACGCCGGACAAGCCGAGGATGCTTTTGCCATTGTCGATCGTCTCACTACGACCGAATCCACGGACGAGAGGGACTCGCTTATTAAGAATTATTTGAGAAATTTGGTAATGGCCAAAACACCAGTGACCTGggttttaaaaataatgaatgacaTCGTGGTGAGAAAGAAATATCCATTTGCGTTAACCGACGTGTGCGGCGCTGCACTTGAGTGCGGTGAGCGCGAATTAGCCATGGCGCTATTTGAAATGATCCACGAGAGAACGATGATCGTGAGACCTCATTACTACTGGCCACTTTTGCTTCAAGCCTCGAAGAACGATGGCGAAGCGGAAATATTTCGAACCATAAAGCATATGCTGTGTCTCAATGTTCGTTTGGATCACGATACTCTCTTGCATTACGTACTCCCGTACGTGAATACATTCGATTCACTCTGTACGATACGAAAATTCGGTGATGTCGGTTTGGAAAGTTCGATCTTGGTGACACCGTTAGTCTGCCATTTATTGGCATCAGGCAGACTCAACGAGAGCCTAATTCTATGCTCGAAATTCAAAGGAACGATTGACTATTCACGAATTCTCGTACCGCTTCACATCGCCTATAGAATCAAACAAAATATCGATAATTGCGTTCAAATATTCAAACACGCGCCTAGTGGCAAACATCACGCTGACCAATTTCTCATGATTCTTTATGATGAAAAACATAGAAAGGAAAATGTATCAATCGTTGACTCGTTTATTCGTGCATTCGAGGCTCATGAGATTTCGGTGGAGAAATTTTGCGAAGCACGAAAAAAACGGGAAGCGAACGACGGGAAGGAGGATACAACGGGAATAAATGATCGGGATGATAAAGAATTATACGGTAGTATACCGCATCCTCGTGATATGAATATCGAAGAATTGGAGTGTCATCTTATCGagttgagagagaaaaaaatgaatacacgCGGTGTTATGAGAAGGCTCTTTATGCTACGATGTTCGCAGAACAATGTCGCACGTGTCGAGGAGATCAGGAAGGAATACGATGATAATGGTTATCTTTGGACTTCGGGAATGTACTCGAGTCTATTGCAATATTACATAAGAAACAGACGTATTGATGAGGCTCGAGAATTGTACAAAGAAATGCGGGAACATCATAGCGACTTTGTAATCGACGATGTCAAAATCGTTCGGTTGGCAAACGCTCTGATTGAGAATAACGAGATCGACGAGGCGATTATGATTCTGGGTTCGGCACGCTCACGGGGTGGTCCATTGTTGTCGAGGGAATGCTGGCGTTTGTTAAATACGGTAGCGCACAGCAAGTACACCGAGATGACCGAGAGCATTCTCGATATTCTCGTTAATGCCGGTTACTGCTACAAAACAAACGCGATTCTTGGTACTCTGATACGTCAGCATCTGCTGAAAAATGATCTCGTTAAAGCTGTCGATACTTTTCAAAGATTGGCCAACCAGCACAAATGCACACCGCTTCGACAGGAATTGATAAATGCTCTTttgaaaacaatgaaatgcgaTAATACGAGAAAAAATGAGTCAATCGAGATGctcaaaaatgtacaaaatgttaCTGCCAAGATTTATGGCGCcgcaaatataaatattaatttacttGTCGGTTTGGCGCAAAACGGTATGCGCGAGGAAATGCAAAGATTTTTCGAGACGAACAGCGTATCCAATAAGGTATTCACGAAAAGACTCGCGAACATTTCGGAGCACGATAAACTGTTAATATTAACGGGAATTCTCGATTCTTGTACGAACATATCGCAAAGTCAAAGGATTGTTCTCTACGAACAGATTCTTTCCGTGTACAGTAGATCGGGTAATTGCAAAAAAGCCATCGAACTTTGGGACAAAATATCAAAAGAGGATAGAGGAACGTCACGAACGTTTACGATGAATTTCGCCAATCTACTGGAAAAGCACAATGTACAATTGCCCGCGGATTTCGAAGCCAGTTAG
- Protein Sequence
- MLTLILQTQEGHQIELNVQPDDTFADLKSQYADHEVVGLSHSLEQLITNGANVAENMKIFDYVTASAQEWYSTDTVNQPATDQPVETEKKIKECCARDCTNNVATTPGKSFFPLPTDHVRLSVCLIEIGRPDLYNRIFRPDTEECQKYFLCNSHFNQESSLTLQGADEQLPVLKPKNDRPKLNVIDETILTKEKKVNDKHQELECDGKDSELGLFGTDENIEHPGILCRLCGKIAENPIHLYAKETVNIEDEFNLADKINLCLPVTITVMDPLPKQICQDCRVKLDICHDLALSSLQTEDKLKALLRENRLCVNVNAKQQCPLCIEGDMGIVKKSGIYRREELKDDLYKKKTDNEDTKDLSLSVKLHLPILDNSVSAPMTIENDLEAQSSTNDISLSLPNGEFSCSICSSKIVDFTAIKSHECHHEDQISFRSCVICKNTNFTDNNELEAHYRRHGLVDDKLNDVLERYTSLQFDKTTDNPKMHNTKNCQIRCENCDKILPNEEKLTIHDCSQIAHDLEIFEEHFLVKTDHDDQTIERTGKESKVPYNCHFCEKQFTRKGSLEKHITTMHNGPLNNFIAPRCYKCKNCCEAFAREIDAETHTSLAHFVSFASTNTIFEHSDEFNTEELIATCLYVCEYCERCFTIPSSLHEHRESEHINNLKYSCLMCNQTFDSRRQLANHKSLRSHRKPLDGLSIRQYYVCKYCDKTFLHHSRYTAHALQHRKITVPYLCRICNLNFLTYREIALHRKISHPYQSALHERTSFTYNCQYCRKEFAQEVALIKHIRVHTGERPYKCTICDKGFSQSSGLYTHLTIHSDLRPYTCTKCPRAFKMKRDRDRHIKRHAGNRPYKCEFCKKAFMTQHVYSQHRKIHTDERPYKCDICGQAFRRSHVLTVHMRRHTGEKPHVCEICLKSYRQRGDYLKHQKIQHGICYVTVAPKFDCPSLNIEKSDIPINSTSNKINESISNNTIHWQLSQWCRSTKNDEIRAQDLLQIMKYCDGENNTTDSTGLALLRCCHMLVNVKLSNRRHLTDQTWNLIEKNVSVPTLEHYNTLLSVYVRTSETVDVKKFLNSMRVEPDVETHRLLLDCVAKSGDVESTLYVLSLMKKNGYSLNEGIFNSLIEAYATSGDVKSALKNINTMMQSGIPPSTQTWSIIACGYAKIADISRMMEILNSHSPSLEQILEIAKFLSLSGHVSHLPKVLKFLTSDMDLNNSTVNETITELTHAGQAEDAFAIVDRLTTTESTDERDSLIKNYLRNLVMAKTPVTWVLKIMNDIVVRKKYPFALTDVCGAALECGERELAMALFEMIHERTMIVRPHYYWPLLLQASKNDGEAEIFRTIKHMLCLNVRLDHDTLLHYVLPYVNTFDSLCTIRKFGDVGLESSILVTPLVCHLLASGRLNESLILCSKFKGTIDYSRILVPLHIAYRIKQNIDNCVQIFKHAPSGKHHADQFLMILYDEKHRKENVSIVDSFIRAFEAHEISVEKFCEARKKREANDGKEDTTGINDRDDKELYGSIPHPRDMNIEELECHLIELREKKMNTRGVMRRLFMLRCSQNNVARVEEIRKEYDDNGYLWTSGMYSSLLQYYIRNRRIDEARELYKEMREHHSDFVIDDVKIVRLANALIENNEIDEAIMILGSARSRGGPLLSRECWRLLNTVAHSKYTEMTESILDILVNAGYCYKTNAILGTLIRQHLLKNDLVKAVDTFQRLANQHKCTPLRQELINALLKTMKCDNTRKNESIEMLKNVQNVTAKIYGAANININLLVGLAQNGMREEMQRFFETNSVSNKVFTKRLANISEHDKLLILTGILDSCTNISQSQRIVLYEQILSVYSRSGNCKKAIELWDKISKEDRGTSRTFTMNFANLLEKHNVQLPADFEAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -