Basic Information

Insect: Oxytorus armatus
Gene Symbol: gtf3a
Assembly: GCA_958009045.1
Location: OY253746.1:597438-602999[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00032 0.029 15.0 0.2 2 23 853 874 852 874 0.97

2 16 0.67 60 4.6 1.0 2 23 907 928 906 928 0.96

3 16 0.0011 0.096 13.4 1.8 3 23 937 958 936 958 0.98

4 16 0.0019 0.17 12.6 1.8 1 23 965 988 965 988 0.95

5 16 0.0003 0.027 15.1 2.1 1 23 994 1017 994 1018 0.93

6 16 0.49 44 5.0 0.2 2 23 1025 1045 1025 1045 0.94

7 16 1.5e-07 1.4e-05 25.5 2.1 2 23 1051 1072 1050 1072 0.97

8 16 2.4e-06 0.00022 21.7 0.2 1 23 1078 1100 1078 1100 0.99

9 16 0.0032 0.29 11.9 3.9 2 23 1112 1134 1111 1134 0.95

10 16 0.49 44 5.0 2.6 1 23 1140 1163 1140 1163 0.92

11 16 0.0046 0.42 11.4 1.9 2 23 1185 1207 1184 1207 0.95

12 16 0.0033 0.3 11.9 1.9 2 23 1214 1236 1213 1236 0.96

13 16 4.4e-05 0.004 17.8 1.7 2 23 1244 1265 1243 1265 0.97

14 16 0.0013 0.12 13.1 2.3 1 23 1271 1294 1271 1294 0.96

15 16 0.35 32 5.5 3.2 2 23 1301 1322 1300 1322 0.96

16 16 0.55 49 4.9 1.9 1 23 1328 1350 1328 1350 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00032	0.029	15.0	0.2	2	23	853	874	852	874	0.97
2	16	0.67	60	4.6	1.0	2	23	907	928	906	928	0.96
3	16	0.0011	0.096	13.4	1.8	3	23	937	958	936	958	0.98
4	16	0.0019	0.17	12.6	1.8	1	23	965	988	965	988	0.95
5	16	0.0003	0.027	15.1	2.1	1	23	994	1017	994	1018	0.93
6	16	0.49	44	5.0	0.2	2	23	1025	1045	1025	1045	0.94
7	16	1.5e-07	1.4e-05	25.5	2.1	2	23	1051	1072	1050	1072	0.97
8	16	2.4e-06	0.00022	21.7	0.2	1	23	1078	1100	1078	1100	0.99
9	16	0.0032	0.29	11.9	3.9	2	23	1112	1134	1111	1134	0.95
10	16	0.49	44	5.0	2.6	1	23	1140	1163	1140	1163	0.92
11	16	0.0046	0.42	11.4	1.9	2	23	1185	1207	1184	1207	0.95
12	16	0.0033	0.3	11.9	1.9	2	23	1214	1236	1213	1236	0.96
13	16	4.4e-05	0.004	17.8	1.7	2	23	1244	1265	1243	1265	0.97
14	16	0.0013	0.12	13.1	2.3	1	23	1271	1294	1271	1294	0.96
15	16	0.35	32	5.5	3.2	2	23	1301	1322	1300	1322	0.96
16	16	0.55	49	4.9	1.9	1	23	1328	1350	1328	1350	0.95

Sequence Information

Coding Sequence: atgagtgaaacGAATAAAGGTGTATTGTACTTTAGCGTAGAGGAAAATGACAATAATGCTGGGTGCGATGATGGTAATTTAAACGACGATACGTCAGCACACGAGACACTTATACGTGATCTCACATCGGACAATATTTCTACGCTCGACGATGTACTTTCCCAAAATGACCGGACACGCAATGTCACTGCGTCGGATGGTCGTTCAGGAGGCAATGTCGTTAACGTCTGTGGGACAAAGACACAGGGGTACAGGATCGTGGAGATTCCTTCAGATTCTACGCAAAAAGAGGGCAAAATCTGTGGAAAATCCGCAACAAACTCGAAAAGACAAGAGTACATTGATGTTAATCTCGAAAGGAGAtcaaaaaccattgaaaaaaatgtccccAAGAAGATAAAAAGTAATTCGATATCTCTGTTGAGAGGATCGAATCGCACGGCGTTGTTATCAACGAAAGAGCGTTCAATCGCGCGAGTGAAAAACATaaacgaattgaaaaaagtaaCGCCACGAGTAAAGCTTGTGTCACCCGAGGTAACGAATGTGACGCAATTAACAAAAGTCAATATTACGAGTAATGCGGAACTGAAGAATTCATCGAGCACAAACGTGAATcgtgaacaattgaaaaattattgccgTACTTGCGCGGGATTGAAATTACCGCTTGTCGATATATTCAGCGAAAAGGGTATACAAATGCGGCTGAATCAACAAATGAAACATTTGGAGGACATAAACAAGCATGATAGTCTATCGACGCAAATGTGCATGGACTGTATATGCGATCTTAAAATGAGTTACAAATTTTTCATGCAAATAAAAAAGGCACAGATTAAATTGCAATCGTTGAGCGCAGCGTTGCACGGTAATGCGACGAATATTCGTAACGACGACGAGAGATCGCGTCCAATAGCAACGATCACACTGACGAATAGTCCAACGCGTACGACTTATACGGCGAAAAAATCGGAAAGCGAGACATccgaattttcgacaaaattctcCAGTCCCTCTAAAATTCTCGAAGATATCGGAAAAACGGAGATTATTATCAATGACGAGCCACAAATTAAAATCGAGCCTTTAACTGACGAACAGTGGAATTTCAATCTCAGCGATGACAATGACTCGATAGAGGAATTTGATCCGGATGATCCGTCGTTTCAATCGGACAATGTCGAATCGGAGATCGATTGTTCATTGAAGAATTTGGTAAATCCACGTATCCAAGGAAATGAGGAAATAaataatatcgaagaaaaacaggaaataaagaATATCGATGAATATGAAGAATCTCAAAAGATGAAATGCGACAAGTCATTTTCATTATCCGAAGTACATGGTCAGTCCCTAGTAAATCTTGAATTAAAATCAGAGCCAATAAAAAGTGACAGCAAAGATCCCAATAAAACGGTATATCAGTACGACACAAATTTAAAAGCTTACGTAAAACTCGAGCCACCCGACGACAATGAGGAAAAGAACGACGACGATGTCATCGACACAACGTCTTTcttggataaaaaaaacgatcaatcaATCACGAGCAAAGACATTGTGAAACAGCCAAATATATTAAAACGTAAAATCTCGTCTCGCAAGGATTTTTTAGGATATCCCGTGACGTGCGTCAAAACGTCGGATTCGACGCTCGTCAGATCGGGAAAGAGAGACACGAAGAAGCCACGATTGAACGTAAAAAATGCGTTAAACATAACCGAGGAGAACGAGGATGGTATAATGTATGTGACGGTTAAAGGAACTAATCCGAACGAATTGCTGCTcgtgaaagtgaaaaaaatggataaatcattggaaaaaaaggaagataAGAAGAGACCAATTGATTTTAACATAAAGCTCGAATCTGGAATCAAGAAGGAAATGGAATTTAGTCTTGTACGCAATAAATTTGCGGACACGAGAGAGCAAATAATCGAGGAACAGATCGAGGAGTATAAGAAAAAGCGGGAAAAATTATTGGGCGGTAGCGCCGGTGTTCCGAATGCCCTAAAGTTTGAGGATGGCATGATACGTTTTGTGAATCCAATCGAGAGTACAGAGAGCAATGTGAACGAGGGTGTGAGAATTAAAATTGAGCCTAGCGAGGAAATTGAAGATGTACGTTGCGCGATGACCAAGTCGAAGATTCGAGTGTCCGAAGAGACCGAGGAAGTTGAATCAGTCGTGAGAAGCAAGGAAATCGAGACTTACGACAGTACGAGCGAGTATCTCTCGAGGCTAGCTAGACTGAAGAGAAAGTGGGACGAcgcaaagagaaagaaagaatcgTTACAGCGTGAACTCGACGAATCATATTCCGAGGGAAATATGGAAAAATTAGCTCGTATACtcggcgagagagagaagaatctCGCTGATTTCCAGGCGTATCTCAAACAACGAAGAATCGTTATAACACGTTTGAAGGACGAAGATGTGATATCGTTGTACGAGGATCGTAATAACgcatcggcgagaaaaaatttCCCCGATCTCATTGACGCCAGTACACCAATGGATTACATACCGCAGGAAAATTATCTCCAGTGTGATTATTGTTCCGAGACATTTGCCCTTCGTGATTTACTCGAGGAACATCTCAAATCACACGACTACAAGCTAATGTATTGGTGCGAGGATTGCCGTTTGGAATTTCCAACGATAAAATCGAAACGTACGCACAATGCcgattgtatgaaaaaattgacgTGTCGTTATTGCGATCTTGTGCTCGAGTCAAAGGGAAAAAAGAGGCAGCACGAGCAAAAACACGTTGACAGTATGTACGGTCAATTGTGCGATGTTTGCGGTGAAAAATTTAAGCACCAAGCGACCCTCGATCAACATTTTAAGACCCAACATATGACGTGGGAGAAGATTTATCAATGTCCAAAGTGTCCGAAGAAATTTGCTTTCAAgcaaaaattaacgtttcacGTCAAGTCCGTGCACACGACACTGCGAGCTTTTTTGTGCGAGGATTGCGGCGCCGATTTCAAGAATCCAGCGAGTTTACGACATCATCGCATCCGAAAACATCATCCAACGGGAAACAAGCGTGAATGTCCAGTTTGCAACAAATTGGTGCCTTTTTATAGCCTCTCGAAGCACATGTATACCCACAAAGCGTACAGCATTCAGTGTCCGCACTGtgacaaaatgttcaaaaatagTTCAACGCTCAAGCAACACGTCAGAATTCACGAGGACCAGAGACAGTACAGATGCGATACTTGTGGCGTTGGTTTCAACCGTCGCGATGGTTTACGTCTACACATGAGAGTTCATCAGAAGAGCGATAGTCGGGCACTGAAGGAATGCTCGTGTCAGATATGCTCGGAAAAATTTCGTAATCATTCGTTACTCGTTATACACAGAAATCGCGTTCACAAGGACGGTCGTCAGTACACCTGTCACATATGCAACAGATCAATGCTATCCACAAGATCGCTCGAGTGGCACATGTCTCATATACACAACGAGACGATACCGGGCGGATTGAAAGAAGAGGCGGAGGAACCGCCGGAAAAAAAGAGAGTATCTTGCGCTCATTGTGATAAAACTTTTAAAACCGAAATGATACTACGTACGCATATTAAAAATACGCACATCGAAAAAGATCCTACCAAGTGTCTCGATTGCGAGCAAACTTTTACATCGGACGTGCGTCTCAGACATCACATGATGGTTACTCACAACAGATTGGAGGGTACACTGACTTGTCCGCATTGTCCAAAACGTTTTGTCAATCAATTACGCCTCAAGACACACATGATATCGCACTCCGAGGACAGACCTTATACCTGTGAAATTTGTGGTTTTAATCTCAAAACGAAGATACAATTGATAAAACATCATCAGAATAGACACAGCGACGAGAGACCATTGCAGTGTCGTTATTGTCCATGGCGATGCAAACAAGTCAGTGCACTCGTTTGTCACGAGAGAACACACACCAATGAACGTCCTTATTCGTGCATTGTTTGCCGACAACGATTCAAGTACTTGGGCGATAAGAATAAACACGAGAGACGACACGAGAGTCTCGGTGGTTCTGGTTTTAAGAGAATCGTTGCCGgtagaaatcttaaaaatccgaaaatacCGAACGAAGAAACATCGACATCGGAACAGGAACAAATTGATTATGAGAATGCCGATGACGAGGAACAGCTAGTCGATGAACAACAGTTTGACGAACAACAGTTTGACGAACAACAGGACGAGGAATACACCGATGATAAGTTTATCGAGGAggaaattgtgaaatttgaGACGGTGGATATTGGCGAAGAGTACGAACAAAATTACGAACAGGAGTACGAGGAAACTTCGAGAGAAGCGTCCGAAGCTGCCGAAGTTATAATGAACATGGAGGATACTACCGTGTACACGGAGGAAGTGACAGCTGAAAATATTGAAACGGCGGAAATGATAACCGATGAAATGATTACGAACGATATATTACAACCGGACATTACCGTTGTTCATTTACAACAGCAGGACGATTCTGGTAAAATCCAAGTAATACCAGTGATGCTATCCCTTCCCGATCTTAGTGACTCGAGCGCTGAAGTTAATCTCGCAACGGCATCGATAATGTACAATAATTGA
Protein Sequence: MSETNKGVLYFSVEENDNNAGCDDGNLNDDTSAHETLIRDLTSDNISTLDDVLSQNDRTRNVTASDGRSGGNVVNVCGTKTQGYRIVEIPSDSTQKEGKICGKSATNSKRQEYIDVNLERRSKTIEKNVPKKIKSNSISLLRGSNRTALLSTKERSIARVKNINELKKVTPRVKLVSPEVTNVTQLTKVNITSNAELKNSSSTNVNREQLKNYCRTCAGLKLPLVDIFSEKGIQMRLNQQMKHLEDINKHDSLSTQMCMDCICDLKMSYKFFMQIKKAQIKLQSLSAALHGNATNIRNDDERSRPIATITLTNSPTRTTYTAKKSESETSEFSTKFSSPSKILEDIGKTEIIINDEPQIKIEPLTDEQWNFNLSDDNDSIEEFDPDDPSFQSDNVESEIDCSLKNLVNPRIQGNEEINNIEEKQEIKNIDEYEESQKMKCDKSFSLSEVHGQSLVNLELKSEPIKSDSKDPNKTVYQYDTNLKAYVKLEPPDDNEEKNDDDVIDTTSFLDKKNDQSITSKDIVKQPNILKRKISSRKDFLGYPVTCVKTSDSTLVRSGKRDTKKPRLNVKNALNITEENEDGIMYVTVKGTNPNELLLVKVKKMDKSLEKKEDKKRPIDFNIKLESGIKKEMEFSLVRNKFADTREQIIEEQIEEYKKKREKLLGGSAGVPNALKFEDGMIRFVNPIESTESNVNEGVRIKIEPSEEIEDVRCAMTKSKIRVSEETEEVESVVRSKEIETYDSTSEYLSRLARLKRKWDDAKRKKESLQRELDESYSEGNMEKLARILGEREKNLADFQAYLKQRRIVITRLKDEDVISLYEDRNNASARKNFPDLIDASTPMDYIPQENYLQCDYCSETFALRDLLEEHLKSHDYKLMYWCEDCRLEFPTIKSKRTHNADCMKKLTCRYCDLVLESKGKKRQHEQKHVDSMYGQLCDVCGEKFKHQATLDQHFKTQHMTWEKIYQCPKCPKKFAFKQKLTFHVKSVHTTLRAFLCEDCGADFKNPASLRHHRIRKHHPTGNKRECPVCNKLVPFYSLSKHMYTHKAYSIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKSDSRALKECSCQICSEKFRNHSLLVIHRNRVHKDGRQYTCHICNRSMLSTRSLEWHMSHIHNETIPGGLKEEAEEPPEKKRVSCAHCDKTFKTEMILRTHIKNTHIEKDPTKCLDCEQTFTSDVRLRHHMMVTHNRLEGTLTCPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCIVCRQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNLKNPKIPNEETSTSEQEQIDYENADDEEQLVDEQQFDEQQFDEQQDEEYTDDKFIEEEIVKFETVDIGEEYEQNYEQEYEETSREASEAAEVIMNMEDTTVYTEEVTAENIETAEMITDEMITNDILQPDITVVHLQQQDDSGKIQVIPVMLSLPDLSDSSAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -