Oarm000902.1
Basic Information
- Insect
- Oxytorus armatus
- Gene Symbol
- ZFX
- Assembly
- GCA_958009045.1
- Location
- OY253744.1:20201488-20205869[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.3 1.2e+02 3.7 0.1 3 23 16 36 15 36 0.94 2 15 3.3 3e+02 2.4 3.8 1 23 931 954 931 954 0.81 3 15 0.013 1.2 9.9 0.9 3 23 1040 1061 1039 1061 0.97 4 15 0.0034 0.3 11.8 0.1 2 23 1074 1095 1073 1095 0.97 5 15 2.6e-05 0.0023 18.5 1.4 2 23 1098 1119 1097 1119 0.97 6 15 0.013 1.2 10.0 0.3 1 23 1125 1147 1125 1147 0.95 7 15 2.6e-05 0.0023 18.5 4.5 2 23 1154 1175 1153 1176 0.95 8 15 0.11 10 7.0 3.7 5 23 1189 1207 1188 1207 0.97 9 15 2.3e-05 0.0021 18.6 1.5 3 23 1214 1235 1213 1235 0.97 10 15 0.013 1.2 10.0 0.5 2 23 1251 1271 1250 1271 0.97 11 15 7e-05 0.0064 17.1 0.7 1 20 1277 1296 1277 1299 0.92 12 15 8.7e-05 0.0079 16.8 2.7 1 23 1307 1329 1307 1329 0.99 13 15 0.0024 0.22 12.3 3.2 1 23 1335 1357 1335 1357 0.97 14 15 4.4e-06 0.0004 20.9 3.9 1 23 1363 1385 1363 1385 0.99 15 15 0.00032 0.029 15.1 7.2 1 23 1391 1413 1391 1414 0.96
Sequence Information
- Coding Sequence
- ATGGAAATCGGCGGTATCGGGTCAACTGGCGGTGGGGCAGTCGCCTGTCCCGTTTGTACGTTATATTTGCGCGAGGGTATAAGCCTCCAGAGGCATTTGGACACTCATCCCAAGGAGCAGGTTATAGAGGCTCTGATCAAGGCAAGCTCGTCCCCGACGCCATCTCCGACGTCTGTGCTACCTCCTAACGTAGCTTCCGTGACAAACTCTACgtcgcagcagcagcagcagcaattGAATTCAAGCGCTCAGTTACCCTCCCAATCGTCCTATCCGGTTAATCCCGTTTTTGAATGTCCGCCAATAAATACAATGATGCCGCCGCAATTTGCCTCGTTCAGTTATCAACAATTTGTCAACAACGGGACAATGATGATACCGCAGTACGCTATGGCGCCGCAGGCCAATCAAATGATGCAGATGCTTTACAATCCTTACGGTATGTACCAGCAACAACAGATACCCACCGTTCAAATGATATCGCCAATAACGACAATACCAACAACAAGAATAAGACCCGTAGAGACGGTGGCAAGCGACGTCGGTACGAGAGGTGTTATAATACCGTTGAGCGGGAACAACGCAAAACAACAGTTAACAACGGCACTGCTGTCGGAACCTGAGAGCGAGTCAATTTTACCGGATATCGATATACCAACGACGTCAACGTTGTCGGACACCGACGTAACGACGAGTCGTCAGCACGAGAGCGAAgaaacaacaacgacgacaacgacgacgacgacaacgacaacgagacACGGCGTCGAGGACAGAGGACAACAGACGCAAAATCCAATGACTCCGAGAATGGCCGGTGAACGTCAGGAGTATCAGAGCTCGCAGGATTCGATGGGTGAAACTTGCGACACCAGCCCCACGGACGAGGAGAAAAACGAGAGTATATTGCCCGACATTCAAGAGAGACAAACAACACAAATCAACGACACGGATGTACAATGTAAAGTAATTGAGTTCGATGAACCGGAGAGTCGCGAGTTTACTCAGGTTTACGAGAACGAATTGGAGAAAACGAGCAATAACGAGGTTGAGTCGGAGATCGAGGAGCATAAGCTCGACAGTGATATGCTAATGGAAACGAAGGAATGCGCGACTGTGTCGTCCGTTAATAGGGAGGATCGTAACGCGAACGAGACGAAGGATACGAGCCAGCCAGAGGTTGAACAGCTCGAGAGATTGTTGATAACGATAATGGAATCGGGATTCGAAACGGCGAGGATCAAGAACAACGTGACAACGACGGAAAAGACGGATCGGGACGAGGATAGAACGAGAAACGACGTGGACGCAACGACGGAAACGACGAATTTAGATTGTCAGGAGGAGAAGACCGAGGAGGAAACGATTAAAATGTACAACTCCGTGGAGAATGAGACAACTCGCAAGATTATGAACGATAGCATTGACGACTTAGAGAGTAATTTTAATAACGCATATCGATACAGATGTAGCTTATCGGCGCCATCGTCACCCGCTGTTACGAAGAAACTTCACCGAACTTACTCCCTCAGATCCGATTATGGATCTAACGAGAACGAAAATTTCGATCCCGTTGGTTTTGACGCGGGTACTCTGCAGGATCAGGATGACGACGAGACCAAGAACGGGATGGAGGATAATTTCGACGAGGAAGACATGGAGATCGAGGAGATAGCTAGTCCCCACACGCCTTTTATCAAACAAAATGATTCGCTCGATCGTGTCAGAACGCACACGCCTTTATCGGCGATAAGCGGTATATCGGGACTTCGGGTGCAAAATAATATCGTTAAATCTGGCTCGAGAGGCTCGATACAATCGTTCTGTCCGATGGACACGGAGAGCACGAGCGGcgaggaggaggacgacgacgatgatgaggACGAGGAGGAAGAGGATGAGGAAgatgacgaggaggaggagggtgaGGACGAGAGCAACGATTCGGCCGATTTGTCGTCGGTCAAACATCCGTTAGATTGTTTGCAAAatgcgcaagaaaaaaaatcaaacgttcGTGAAACAACGATGACGACAACCTCGACGACTACtaccgcgacgacgacgacgacgccgaACGACGGCATTGAACGAAAAAACGATGCAAATCAGATGTATCATCAGTCGGTGATAACCGAACACGTCAGTTCATTCACGACAATTAATTCTCAACAACCGTTAATGATGCACGATAATTACTCGATGTCGAGCAACAAATCGTTGCAAAACAATATAATTAATCTATCGGAATTGGCCGATCCAACGACGAGCACCGAGTCAAAGAGTTTTCAGGCAACGAAGTCTATGCATCACATGCAATCGACCGAGTTACTGAATATCAATGAGGACGCTCATGCCGGACCCATGAACGTTTTCGAGTTCGACGGGCTTCAAATATTAGTTCCTAGTACATTCATAAGTGAATCATCGCAAAAAGCTATAAGCGCGACGAGCCAACAATCAATGGCGAGCAGCGAAGGTGGCGCCGGTATCGACGAGGAGGTAAAGAGCGTTAATATGCGCGCCGACGAGACTATGCCACCACGTGGCGAATTGTCGGAGCAAGAGAGCAACGGTTGTACCGAACATTCGGCGTGGCAgATTTACATGGGCCAAGAATCATCGCGGATGTCGACGTCTTACGATCTAATGGCACGTGAGAGTTGGGAAGAATCTGAGGGTTCCGACAACGAGGTCGGTGTACCCCTACTCGACAGTAGATCATTAGCGACTCACTTTACCTCTAGCCTCTTTCTCGATCGGGATCGTAAGACACCGACAAAACGAACGTTCAAGTGTTCGCACTGTTCCGAGGTGTTCGACTGTCCGAAAGAGCGCCGTGTACACAGTACAACGGTACACAAAGAGGCGGGTCCGAGCGGCAGCAATGATCCGACGAGTCACGCCGATGATAAGGATATAAAACTTTTGGACGGCCGTATGAACGTGTTCGACGATATATTCGTATCGGGTATACACGTTCAACAGCCGTACAATCACAATCAACAACCGTTGTTGCATCAGTTACAACCGCCGCAACAACCCGACAGCGTCAAAACCACCGACGCCgttcaaaaaattgacaataacgCGTTGCCgcaaaatttggaaattttgtgCGCAATGTGCAGTCAACGTTTCAGCAGCGAGCGATCGTTACAATTGCACAACAGACGTGTTCACGGTACCGAGGTCGCGCGACGACTCCAAGAGATATCGAAATGTCAGATATGCAACGAGGAATTTCCCTCGGTAATGCTGTTCAATGCTCATCTAAAGATACATCCGCTCGAGTGCGCTCAGTGCGGCAAATACTTTTATCGTAAGCCAAATTTCAAGCTTCACATGAAACGACATCTCGGTATAAAGCCATTTCCCTGCACGGTTTGCGACAAGGCATTTTTGACCAAGCAAAAACTCGACGAGCACACGAACGGTCATACCGGCAACGCGCCGGTCAAGTGTAATTTGTGCAACGAGACATTTCGTAGATATTCAAATTTGACGCAGCACAAAAATCGTCATCATCTCAACATAAAGAGAAAATTGAAGGATTATATATGCCACTGCGGTGAGGTTTTTCATACGAAGAAAAAGCTCGCGTGGCACAAAGAGACACACGACGAAAAGCCAAAGGCGTGCACCTATTGTAACGAGAGGTTCATACACATGGCGAGTCTAACGAGACACATGAGACGGGCGCACAATCGTCGTTTCGTACCGGATGCACAGCGCGAAAGCGAGAACGTCGAGTGTCCGATATGCAAGTGCATATATTTACGTTCGTCGTTGTCGGTACACATGAGGGTACACAACGGCGAGAGACCGTACGAGTGTCAGGTGTGCTCGAAGGCTTTTAGTACCAAATGGAATTTGCAATTGCACAAATGGACCCACGCCGCGCGTAGCACGAAACCGTTCAAGTGCAATCAGTGCAGCGCGGCGTTTTATCGACACAGCGATTACACCGCTCACATGAATTCACATCGCAACGTAAGGCCCTATACGTGCAATTATTGCGGTGCTCAATTCATAAGAAAGTACAATTGTCTTAGACACGTGAAGGAACACGAGGAGAACAAGGCTTATACGTGCGACGTGTGTAACAAAACGTTTCATCGTTCGTACTATCTGAAGGAACATTTGCGTGTACATTCGGGCGCGAGACCCTATACTTGTCACATTTGTGGCAAATCAAGCAGTACCAAGTCCAATCACAACAAACACGTTAGAATTCATCACGCCCGTGAGCCTGTAAATACGGAAAATTAA
- Protein Sequence
- MEIGGIGSTGGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSSPTPSPTSVLPPNVASVTNSTSQQQQQQLNSSAQLPSQSSYPVNPVFECPPINTMMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPTVQMISPITTIPTTRIRPVETVASDVGTRGVIIPLSGNNAKQQLTTALLSEPESESILPDIDIPTTSTLSDTDVTTSRQHESEETTTTTTTTTTTTTRHGVEDRGQQTQNPMTPRMAGERQEYQSSQDSMGETCDTSPTDEEKNESILPDIQERQTTQINDTDVQCKVIEFDEPESREFTQVYENELEKTSNNEVESEIEEHKLDSDMLMETKECATVSSVNREDRNANETKDTSQPEVEQLERLLITIMESGFETARIKNNVTTTEKTDRDEDRTRNDVDATTETTNLDCQEEKTEEETIKMYNSVENETTRKIMNDSIDDLESNFNNAYRYRCSLSAPSSPAVTKKLHRTYSLRSDYGSNENENFDPVGFDAGTLQDQDDDETKNGMEDNFDEEDMEIEEIASPHTPFIKQNDSLDRVRTHTPLSAISGISGLRVQNNIVKSGSRGSIQSFCPMDTESTSGEEEDDDDDEDEEEEDEEDDEEEEGEDESNDSADLSSVKHPLDCLQNAQEKKSNVRETTMTTTSTTTTATTTTTPNDGIERKNDANQMYHQSVITEHVSSFTTINSQQPLMMHDNYSMSSNKSLQNNIINLSELADPTTSTESKSFQATKSMHHMQSTELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAISATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQIYMGQESSRMSTSYDLMARESWEESEGSDNEVGVPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCSEVFDCPKERRVHSTTVHKEAGPSGSNDPTSHADDKDIKLLDGRMNVFDDIFVSGIHVQQPYNHNQQPLLHQLQPPQQPDSVKTTDAVQKIDNNALPQNLEILCAMCSQRFSSERSLQLHNRRVHGTEVARRLQEISKCQICNEEFPSVMLFNAHLKIHPLECAQCGKYFYRKPNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLSVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -