Basic Information

Insect: Oxytorus armatus
Gene Symbol: -
Assembly: GCA_958009045.1
Location: OY253744.1:24134284-24135829[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 7.5e-06 0.00068 20.2 2.7 1 23 46 69 46 69 0.95

2 9 5.9e-05 0.0054 17.3 4.9 1 23 75 97 75 97 0.98

3 9 0.0047 0.43 11.4 1.2 1 23 103 125 103 125 0.96

4 9 9.7e-05 0.0088 16.7 0.5 1 23 131 153 131 153 0.97

5 9 7.9e-06 0.00071 20.1 2.8 3 23 166 186 164 186 0.96

6 9 3.9e-07 3.6e-05 24.2 1.0 1 23 195 217 195 217 0.99

7 9 8.1e-06 0.00073 20.1 1.7 1 23 223 245 223 245 0.98

8 9 3.5e-06 0.00032 21.2 4.9 1 23 251 273 251 273 0.98

9 9 2e-06 0.00018 22.0 3.8 1 23 279 301 279 301 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	7.5e-06	0.00068	20.2	2.7	1	23	46	69	46	69	0.95
2	9	5.9e-05	0.0054	17.3	4.9	1	23	75	97	75	97	0.98
3	9	0.0047	0.43	11.4	1.2	1	23	103	125	103	125	0.96
4	9	9.7e-05	0.0088	16.7	0.5	1	23	131	153	131	153	0.97
5	9	7.9e-06	0.00071	20.1	2.8	3	23	166	186	164	186	0.96
6	9	3.9e-07	3.6e-05	24.2	1.0	1	23	195	217	195	217	0.99
7	9	8.1e-06	0.00073	20.1	1.7	1	23	223	245	223	245	0.98
8	9	3.5e-06	0.00032	21.2	4.9	1	23	251	273	251	273	0.98
9	9	2e-06	0.00018	22.0	3.8	1	23	279	301	279	301	0.98

Sequence Information

Coding Sequence: ATGTCATTGACTAAAATGAAGGATTATCAATTTCAtcgATATTTTGTAACGAAGTTGTCAATGCTGTCGGATGGACAGTGCGACGTCAATGATATGAAGGTAATGTGCGATGGGCCGATCGATCCGAAGGTAGTTTACGCGTGCGATCATTGCGGTCGTAGTTTCGAATCGTCGTCGGTACTGCGTAAGCATCATCAGCAGGCGCATCCGATCGAGAAGAGTCACGTGTGCGAGACGTGCGGCTACACGAGCACGCATCGGCAAAATTTACTGAACCATCAGCGACGTCACAATCTCGAGTACAAGCATCACTGTGAGATATGCGGCGCGGGTTTCTACGCGCGTAACAGTTATCAGGAGCATCAGTTGATACACACGAGGGAAAAGCCATTTCAATGTGGCATATGCAACGCGACGTTTCGTTATCGTCAGGGTTTGCGTTTGCACGCGAAGCTTCATCAGCCGGATTACGTGCCGCCGCAGAAGAAGCATCTTTGCGAATTGTGCAACAAGCGCTTTTCGCGAAAGCAAGTGTTGCTCGTGCACATGAGAACGCACGGTACGGGCGAACCGCAGAACGAATATGTTTGTCATATATGCGGAAAAGCCGTCTCGAGCAAGACCTATTTGACCGTGCACGTGCGCAAGCATACGGGCGAAAAACCGCACGTCTGCGATCTGTGCAACAAGGGCTTTATATCGCAAAATTATTTGAGCGTTCATCGGCGCACGCACACGGGCGAGAGACCGCATCAGTGCACGCACTGCGACAAACGTTTTACCCAACGTACCACCCTCGTCGTTCATTTGCGCGGACACACCGGCGACAGACCTTATCCGTGCACTTTTTGTCACAAATCCTTCGCGTCTAAGACGATGCTCAACAGTCATTTGAAGACGCACGCGAAACAAAATGCCCGAGCCCAACAGGCCCAGCAGCATCAGCAGCAGGATCAGTCGCATCAGCAGCATGACGTGCAACAGAACGACGAGAGATCGCAGTCGCTCGAAAACGTTTCGGTCTTGTTGTCGgtcgaaaaattttaa
Protein Sequence: MSLTKMKDYQFHRYFVTKLSMLSDGQCDVNDMKVMCDGPIDPKVVYACDHCGRSFESSSVLRKHHQQAHPIEKSHVCETCGYTSTHRQNLLNHQRRHNLEYKHHCEICGAGFYARNSYQEHQLIHTREKPFQCGICNATFRYRQGLRLHAKLHQPDYVPPQKKHLCELCNKRFSRKQVLLVHMRTHGTGEPQNEYVCHICGKAVSSKTYLTVHVRKHTGEKPHVCDLCNKGFISQNYLSVHRRTHTGERPHQCTHCDKRFTQRTTLVVHLRGHTGDRPYPCTFCHKSFASKTMLNSHLKTHAKQNARAQQAQQHQQQDQSHQQHDVQQNDERSQSLENVSVLLSVEKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00263745;
90% Identity: iTF_00798769;
80% Identity: -