Oarm000748.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oxytorus armatus
Gene Symbol
ZBTB38
Assembly
GCA_958009045.1
Location
OY253744.1:15168202-15174683[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0096 0.86 10.4 0.4 3 19 363 379 361 382 0.93
2 16 0.2 18 6.3 0.0 3 20 401 418 399 420 0.89
3 16 0.21 19 6.2 2.8 2 23 464 486 464 486 0.92
4 16 9.6e-05 0.0086 16.7 0.1 1 23 492 514 492 514 0.98
5 16 5e-06 0.00046 20.7 2.6 1 23 520 542 520 542 0.96
6 16 0.0002 0.018 15.7 1.7 1 23 551 573 551 573 0.97
7 16 5.3e-06 0.00048 20.7 2.2 1 23 579 601 579 601 0.97
8 16 7.2e-07 6.5e-05 23.4 0.7 1 23 606 628 606 628 0.96
9 16 0.0077 0.69 10.7 2.6 1 23 641 663 641 663 0.98
10 16 0.0062 0.56 11.0 0.5 2 23 681 702 680 702 0.96
11 16 0.0021 0.19 12.4 0.7 2 23 710 732 709 732 0.95
12 16 0.0011 0.1 13.3 3.0 1 23 738 760 738 760 0.96
13 16 0.04 3.6 8.4 7.4 1 23 766 788 766 788 0.99
14 16 9.4e-07 8.5e-05 23.0 0.8 1 23 794 816 794 816 0.96
15 16 6.5e-06 0.00059 20.4 1.0 1 23 822 844 822 844 0.97
16 16 0.00028 0.025 15.2 1.3 3 23 851 871 849 871 0.96

Sequence Information

Coding Sequence
ATGAAAATTGTGGCCGGCAACGTCATGCAAATACTCATCGAAGAGCGAAGATTCGTCAAACATCTGATCTCCAAACCTATACCGTATCTTCACACAAATCAGTATATATGCTCGTACCACATAGACGATCGTTTCTTCATTAGCAAGATGAATCCAATTATCATATCTTCCAAAGCTGTTCCAACCATCTTCGAAACATCCAAAGATTCTGTGATCGCAatggattttataaaaaatacttaTCAGCCTGAGAAGGTCATAGATCCAGTTAAATCTACCGAGTGTAAAAATGTGGTTGACCAAACGTCTCAGTTTCAAACGACGAGCGATCAGGTTGAATCTGTGTATCTGGGAACGATATTTCATAGAAATGAAGAGTTGAATAAAGCAAATGATCTTGCATTTTACGACATGAACATGGATCAGCTTCTAAGAATACCTGTTAGATTGAATGATTTATGCCGCATATGCGGACAACTTAACATCGATGGAATAGATATTTTTGCCAGCAGGGGGATAGAATTAAGactggaagaaaaaattggTTTACACATGCCAATATCGTTCGATCCTGATGACCTAATGCCCCAAAAAATATGCTCCGAATGTTGCAATAAATTGGAAGCGACACACTCATTGGTCGTTACTTGCTTGCAGACTGATCTGAGATTGAGAAAGTTTTTGAATATCAGTAGCAAGGCTGGTTATCACCCGAAATACATGGACTTAGTAGCCACATGCACGATGACTGTAGCTAATGAAATGAGTGTTGAAAAAGTTGACGATAATGACGATCCATTGAACAATTCTGTCGAAATCGAAAAAGTCCTAAATGCTAATAATTTCAATTGTAAATGGAAGAATAACCCGTTGAATATAGAATCGGAACAACAAGTTGCGATGTGTCCGACCATCGTATCGAGTGACGATAACGCGTCCAACATGAAATACGCGGTACATGCAGATTTTAACAGGTTACTTCAAATTCCCAGAGATACAAGTCCCAAAAGCGATGACCAAAACGATGAATCATCAGCAGTAATCACGACGACCGCAGAGATTCCCGAAACTTATCGCTACTTAGCCTGTTCGAACTGTAACAACGTATTCGCGACATCGGAGTTATTGGAAAGACATGGCTGTAATTCCGAAACTATGGGAAAATTCGTACACAAAAGTGAATTCGAGTTGAACATCATTTGTCCCGTATGCAAATTGTCATTCGTCGATGAAAATGTCTACACAGCACACAAGAGCTCGTGCATGACAAGGTCTAAAAAATTGAATCTCCGGAATTCCGATAAATTCGCCAACGACAAAGCCCATCACGATAATAACGAAGGAATGAAATCGAACATTGAAAAATCTCATTTGATAGTGACGAATCGACGCTGCGGTTATTGTTCGTCCTTGTTCAAAAATCGTAAGAAATTGCAAGATCATATTATCGATTGTCACGACGGTCAAATGTTATTCAAGTGTGGTATTTGCGAAAAAACTTATGAAAAATGGTCGAGTCTCGATGTTCACGAGGCTACACACCGAATTGACAGACCCTATCTGTGCGATCTTTGTGGCAAAAGTTTTAAGCATTCAAACAATCTTCGAGGTCACAAGCGAGTTCACATGGAAGAATCTAAGAAGAAACGTCACCCTTGTGACATCTGCGGGAACGCTTTCAGATCGGGATTTCACCTGCGCGAACACATGAATCAGCACAATGATAATAAGCCTTACGCTTGCGAGCATTGCGACAAAGCTTTTTCCAAGAGGGTACAATTGCGACAACATCGATTATCGCACGGATTGAAGAAGCACGCTTGTCCCATTTGCGGTGTTACGTTCAATCGACAAAGCAATATGCAGTCTCATCTCAAGATACACAACAAAAACGAGGGAACACAACAACCACGAGGGATCTATACATGCAGCGTCTGCGAATACAAATGCCCGACTATGAGGGATTTGAAGATTCATCGAAATCAACACACCGAGAGTGACATAACGGCGCGTATAAAGGCCGGGAACAAGACAATTTGGCAATGCAAGACGTGCAGCAAGATATTTTCAAAACGAGGAATTTTGGTGAATCACGAGCGTATACACGCGCCCGATCGTAAGACCGTCGAGTGCGACACGTGTGGCAAAAAATTggcgaacaaaaattcattgagaTATCACAACAAATCGTTGCACTCGACCGACCGACCGCACATTTGTCAATATTGCGGTCAATGTTTCGTCTCGAAGGATTCCCGCCTGATACACGAGAGAATTCACACGGGCGAACGTCCTTATGTctgtaaattttgtaaaatggaGTACAGATGCTCGAGTCACTTGACGCAACATTTGAAAACTCATTCGTCATTCAAACCTCACGCTTGCCAATACTGCAACAAAGCGTTCACGCGGAAGGGCGCTCTAAACGTTCACGTGAGAATTCACACGGGCTCGAAGCCGTTCGCTTGTGGAACATGCGGTCGTTCGTTTGCACAAAAAAATGACATGAAGAAGCACACAAATACACATCGACCGAGAACCGTGAACTGCGTAAAGTGCAACGACACTTTCAAGACTAAGAGCGAGTTATTGAAACATTTGAGTACCCACGGACCGCAAAGCCGCGTTGAAGATTCATCCGTCCCGCAATACGCCATGATTTCTCACCCAGTGACATCTTACGATGTTGCGACGGGTTCGACCATAGTACAGGACACTGTTCAATTGCAAATTGTACGACTTCAATAG
Protein Sequence
MKIVAGNVMQILIEERRFVKHLISKPIPYLHTNQYICSYHIDDRFFISKMNPIIISSKAVPTIFETSKDSVIAMDFIKNTYQPEKVIDPVKSTECKNVVDQTSQFQTTSDQVESVYLGTIFHRNEELNKANDLAFYDMNMDQLLRIPVRLNDLCRICGQLNIDGIDIFASRGIELRLEEKIGLHMPISFDPDDLMPQKICSECCNKLEATHSLVVTCLQTDLRLRKFLNISSKAGYHPKYMDLVATCTMTVANEMSVEKVDDNDDPLNNSVEIEKVLNANNFNCKWKNNPLNIESEQQVAMCPTIVSSDDNASNMKYAVHADFNRLLQIPRDTSPKSDDQNDESSAVITTTAEIPETYRYLACSNCNNVFATSELLERHGCNSETMGKFVHKSEFELNIICPVCKLSFVDENVYTAHKSSCMTRSKKLNLRNSDKFANDKAHHDNNEGMKSNIEKSHLIVTNRRCGYCSSLFKNRKKLQDHIIDCHDGQMLFKCGICEKTYEKWSSLDVHEATHRIDRPYLCDLCGKSFKHSNNLRGHKRVHMEESKKKRHPCDICGNAFRSGFHLREHMNQHNDNKPYACEHCDKAFSKRVQLRQHRLSHGLKKHACPICGVTFNRQSNMQSHLKIHNKNEGTQQPRGIYTCSVCEYKCPTMRDLKIHRNQHTESDITARIKAGNKTIWQCKTCSKIFSKRGILVNHERIHAPDRKTVECDTCGKKLANKNSLRYHNKSLHSTDRPHICQYCGQCFVSKDSRLIHERIHTGERPYVCKFCKMEYRCSSHLTQHLKTHSSFKPHACQYCNKAFTRKGALNVHVRIHTGSKPFACGTCGRSFAQKNDMKKHTNTHRPRTVNCVKCNDTFKTKSELLKHLSTHGPQSRVEDSSVPQYAMISHPVTSYDVATGSTIVQDTVQLQIVRLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-