Oarm013350.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oxytorus armatus
Gene Symbol
ZNF236
Assembly
GCA_958009045.1
Location
OY253751.1:14866979-14873041[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.00017 0.016 15.9 2.5 2 23 99 120 99 120 0.98
2 22 1e-07 9.2e-06 26.0 1.4 1 23 139 161 139 161 0.99
3 22 5.9e-05 0.0053 17.4 0.9 1 20 167 186 167 189 0.94
4 22 4.9e-06 0.00044 20.8 0.5 1 23 195 218 195 218 0.97
5 22 0.0014 0.13 13.0 2.8 1 23 227 250 227 250 0.98
6 22 1.1e-06 0.0001 22.8 2.8 1 23 364 386 364 386 0.98
7 22 0.00026 0.023 15.3 2.2 1 23 392 414 392 414 0.99
8 22 0.00029 0.026 15.2 4.0 1 23 420 442 420 442 0.99
9 22 1.8e-07 1.6e-05 25.3 0.6 1 23 446 468 446 468 0.99
10 22 0.001 0.09 13.5 2.9 1 23 523 545 523 545 0.98
11 22 6e-06 0.00055 20.5 3.8 1 23 551 573 551 573 0.99
12 22 1.2e-05 0.0011 19.5 1.4 1 23 579 601 579 601 0.98
13 22 9.7e-05 0.0088 16.7 7.2 1 23 607 629 607 629 0.98
14 22 1.7e-05 0.0015 19.1 1.4 1 23 998 1020 998 1020 0.99
15 22 0.049 4.4 8.2 0.0 3 23 1028 1048 1026 1048 0.96
16 22 9.5e-08 8.6e-06 26.1 1.4 2 23 1121 1142 1120 1142 0.98
17 22 0.0014 0.12 13.1 2.8 1 23 1148 1170 1148 1170 0.98
18 22 0.001 0.094 13.4 3.9 1 23 1176 1198 1176 1198 0.97
19 22 1.9e-05 0.0017 18.9 2.4 1 23 1204 1226 1204 1226 0.99
20 22 0.00058 0.053 14.2 1.3 2 23 1454 1475 1453 1475 0.97
21 22 1e-05 0.00095 19.7 1.0 1 23 1481 1503 1481 1503 0.98
22 22 5.7e-07 5.2e-05 23.7 3.0 1 23 1509 1532 1509 1532 0.96

Sequence Information

Coding Sequence
ATGACTCTAGCCGCCGATTGCGTAAATTTCGGTGTCCTGCTCATTTGCTCGCGGGTATTTCACTTCGCTCTCGGTCTCAGCTCTCAATATTACAAGGTAGGCAACATTAGTTCTCAACGTGGccaattgttttccatcaatTATCCACTCTGCACGGGTCAGTTTAAAAATGACAGATTATATTTATCGGACAATAAtgtttacaacgaaaaaaatgttgcttcTATGTTAAAGGCCCAGCTGGACGCTCATCTGAAGCTTCACAATGAGAAATGGTCGAGCGAAGATGTTCGAAAGTGCAAACTCTGTCACAAGCAATTCACCCAGCCTGCTCTCTATCGTCTTCACATCAGAGAACATTACAGAacgaaaatcgttaaaaagacAAAAACAGGAATGAGCCACAAGACAATGTACAAATGCAAGATATGCTCAAAGTCATTCAAAAAACCGAGTCAATTGGGGAGACACATCAGAGTGCATACCGGTGAAAAACCGTTCAAGTGCAATATTTGTACTCGTGCATTCACGCAAAAGGGATCACTTCAGATTCATACGTGGAAGCACATAGGAGTCCGTCCTTATCGTTGTGAATTTTGCAACGCCAAATTCACCCAGAAAGGTAATTTGAACGCTCATATCTTGAGGGTCCACAACGCGAGAGAGGGTGATCCTATTTATAGTTGCACTCTGTGTACCTGCGTGTTCAAAAAGTTGGGAAGCCTGAACGGTCATATGAAGAGAATGCATTCGAATCCTACGGAGGAACAAACACCAAAATGTGACAGTTCAACGGAGGCTGATATGCAAGCGACCGTTGACAATGTAATGTCACAGCTTGCTTCGCTCGATGCAAATGTAAAGAATCAAGCGGATTCGACAAATTCAAGCGCCACGAATCGTCGGGATGATATTATTCAGCAGGCTCTGAAGAAAAGTGGTTTGagtaataaacgaaaaaatttcgatgATGCGAGCAAAAAAGTCGAGCCTCAAACGTCATTCGTGACGTTGTTGGATAGAGCTCAGGATGGTTCATTGAGGAGATATCTGACGATAAAACAACGATGCATCGGAAGTATAAGATGGTACTCTTGTAACTTTTGTcataaagaatttaaaaagcCATCGGATCTCATAAGACATTTGCGAGTTCATACGCAAGAAAAACCGTTCAagtGTTCATCCTGCTATCGGTCGTTCGCCCTAAAATCGACTTTAAGAGCGCACGAGAGAAGACACGCCGGTACGAAGGAATATACATGCGGAATCTGCGACAAGACTTTTGACTGTCACAATAGTCTAACGGCTCACATGCGTTCTCACGTTAAACCGTACAAGTGCGATATTTGCGGCAAATCGTTCGGTACAAGTTCCGTACTGAAAAGTCACATGAACAGTCATACGATGTTTAAATCGAAGATATCACCGGAAGCCGAGAGTCTCGTGACTCAAATTGTTCTCGAGGAGCCACTTTTGATAAGCGACGCTGGCAATAAAATAAGCGTCGCTCGTGTTAAGCCAAAACAGAGACAGGTATACGACACTACTGACGAGGCAAGGCCTCACAAATGTTGGGTTTGCCCTGCTGCTTTTAGAAAAATAAGCCATCTTAAGCAACACTATCTTAGACATACGGGAGAAAGACCCTACAAATGCCCAAAGTGCGATAGGAGATTCACGTCGAACAGCGTGCTAAAATCGCATTTACACACCCACGACCAAACGAGACCGTACAGTTGTTCCGTTTGTAGCGCAAAATTTTCGACTCAGAGTAGCATGAAGAGGCATATGGTCACCCATAGCAACGTCAGACCCTTCATGTGCCCTTATTGTCACAAGACATTCAAGACATCAGTCAATTGTCGTAAACACATGAAAATTCACAAAACCGAGCTTGCCGAACAGCAAGTGGAGGAACAGAAAGCTCGTCGAGAGCCTCAACTCTCGTCGATCAAAGAAAAAGAGTCTATATCAGGATTGCCGGAAAATTTGACTCTTCATGAGGACCTCGCGGTGACCTATCAGTCTCCCGACTTTGCGCAAGCTTTCAACGATCAATTTCAGCCGATATCTATGATTAAGGATAAATCGTATTTGGTTCATAATGGAATGACTGAAACGATCAATAATCataatTTACCCGTGGTAGATAGAGATAACTTAGGAACATCTCAGACCCTGCATGCCGATGAAACTGGCACTATTACGCTACCTAATTACTCCGGTGATCAAACTCTCACGCCAGAGAGTATACGAGAGATCGAGGAGACTTTGAATCAGCAATTATTCAATATCGGAATGCACGATACGAGTAATGTGACTCTGGGCTCGAGGGATCAGCAgggaatgaatattatttatgacAATGGTAAAACATTGGACTCCGTTAATAATGTAGCCATGAACTCCAATATATTTCCGTCGCACTTCGATACCTTTGATATGAGTCAAATAGCACTTCAAACCGATACGGAAATCGATATGGGAATAAGTTCAGCAAATTCAACGAGTATGGCGAGTATATTGCCTCGATCGGCGCAAGAAGAGCAACGTCTCGTGCCGGTAACGACTTGCGGCAACGGTGACGATTCAACGAGTAAATTATCACGTCACTTGATGGTCGTGAGTTCGATGCAAACGTGTCCCGAACTGTCCAGGCCCGCTCAAGCTTGTCCGAAATATCTGAAAGTAATAGCCAAAGCTGACACTACCGACGTTACGGATATTGTGAATACGAATGGTGAAACGAACGAACAAAAACCTATTATTATTCTACAATCGCCCGTTATGAAACTCGAGAAGATTaacgaaaatattaattctCCGAACAAGAGAATGGAATCAAGTGAATCTATTAATACGAATGAAACTACTACGATCGTTCTTCAGCCTGAATCGCTTTTGCAATGTCACATTTGTTGCAAAAAAGGCTTCACAATGGACAAATTGAAGAGTCATTTTCTAAACGGACATCGAGGAACAAAAGAGTATCAATGTTCCGAATGTccgttgaaattttgtacaaatgGTGGATTGAGTCGTCATTTGAAAGTGCACGTCAGTAAAGAATTTTGGGATTGCTCAATTTGCTTCGAATCGTTACCGAACGAAGCGCAATTGAAATTGCACGCACAGATGCACGAGGACATCGAGTGGTCTTCGATAGAACCGGATAGTTCACAAAAAGATCCAATACCCACAGATCCTAGTGATTTCTTGTCAGTAACCGGGGGAATAATCGAGAACGGTGCCAAAGTCACGGTGCCTGAGAAAGTGTTAATTCCAATAGTGGGAgagctcggagcgacagatcgTTTGGAGGAAAATCGTGAACCGCAAAGGAAGGAATACTCAAACAAATGTAAATATTGTCCAAAAACATTTCGTAAACCTAGCGATCTTATAAGACACGTTAGAACACACACGGGTGAACGTCCTTATCAGTGTAAATTTTGCGAAAAGAGTTTCGCGGTAAAATGTACCCTGGATTCTCACGTAAAAGTTCATACcggcaaaaaaacattttgctgCCACGTATGCAACAGTTTGTTCGCTACAAAAGGAAGTCTCAAGGTTCATATGCGTTTGCACACCGGCTCCAAGCCATTTAAATGCCCAATCTGTGACCTTCGTTTTCGAACATCGGGACATCGTAAAGTTCATCAACTCACGCACACCCGAGACAACAAGGAAAGTATGAAACGCAAGGCAAAACAATTGAAGGTAACGGCGATAGCCGAGGTAGTCGCGGAGGTTGAAAAGAATGTTGAAAAAAGTGTGGAAAATCCTGTATACCCGTCGTCAATTACCGAACAGACTATCGAGCGGTCGTATCCGAATCTCGATACGATAACGATCGGAGCAAGTGGAATGACCAATCATATTACTTTTAATCCCGATGGAAcgataattaataacaattcaatGCTCTCGATAAACGAGAGCAATCAGCTGGTAGCTAATTTACATTTTCTTCTGGCAAATGGTCTCGTTACGATTCAAGCTGATGACACTCTCTTATCTGAAGGAACATTGAGTACGGACGTTAATGTCACTCAGAACGAGATTAACGAAGAAAATATCCTTTTATCCACCAACATTGCTCTCGGACAGCATAAACAACAGCAAATCATCCATAACGGTACTCCCACGGATAATATCGTAATGACGAATCAATTGCCAAGTTGTACAGACAATAACGTTCATCATCAAGGTAGAATGATAAATTTGAGTGATTGTACGTCTCTCGTGCCCGTGGAAGCACAAAATATCGTGCCAGAAAAGAAAGTGCAGTTGCAACCACAGCAACAAAACCTCAAGCAAGTTTCCTACGGAAAAACGAGCAATTCGAAGAAAGAATGCGATATATGCGgcaaaatttttatgaaacctTGTCAGGTCGAGAGACACAAACGCATTCACACGGGCGAACGACCTTACAAGTGTGGATTGTGCGAAAAATCATTTGCACAAAAGACAACGTTGCAGATGCATCAGAAAGCTCACACTGGCGATCGACCTCATCCATGCCCGCACTGCGATTATTCATTTACGCAAAAGGGAAATCTTCAGACTCATCTCAAGAGAGCACATCAGCTTGACACTCTGGAGGTTAAAAAACTTCGACGGGGCCAGCAACAACTCTTCAACGCTAAATTCATCCAGAATAATTCGGACGAGAGTAGAATACTGAATTTTGATGATATTTCGATCGTTGAGTATCTCAAGTAA
Protein Sequence
MTLAADCVNFGVLLICSRVFHFALGLSSQYYKVGNISSQRGQLFSINYPLCTGQFKNDRLYLSDNNVYNEKNVASMLKAQLDAHLKLHNEKWSSEDVRKCKLCHKQFTQPALYRLHIREHYRTKIVKKTKTGMSHKTMYKCKICSKSFKKPSQLGRHIRVHTGEKPFKCNICTRAFTQKGSLQIHTWKHIGVRPYRCEFCNAKFTQKGNLNAHILRVHNAREGDPIYSCTLCTCVFKKLGSLNGHMKRMHSNPTEEQTPKCDSSTEADMQATVDNVMSQLASLDANVKNQADSTNSSATNRRDDIIQQALKKSGLSNKRKNFDDASKKVEPQTSFVTLLDRAQDGSLRRYLTIKQRCIGSIRWYSCNFCHKEFKKPSDLIRHLRVHTQEKPFKCSSCYRSFALKSTLRAHERRHAGTKEYTCGICDKTFDCHNSLTAHMRSHVKPYKCDICGKSFGTSSVLKSHMNSHTMFKSKISPEAESLVTQIVLEEPLLISDAGNKISVARVKPKQRQVYDTTDEARPHKCWVCPAAFRKISHLKQHYLRHTGERPYKCPKCDRRFTSNSVLKSHLHTHDQTRPYSCSVCSAKFSTQSSMKRHMVTHSNVRPFMCPYCHKTFKTSVNCRKHMKIHKTELAEQQVEEQKARREPQLSSIKEKESISGLPENLTLHEDLAVTYQSPDFAQAFNDQFQPISMIKDKSYLVHNGMTETINNHNLPVVDRDNLGTSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMHDTSNVTLGSRDQQGMNIIYDNGKTLDSVNNVAMNSNIFPSHFDTFDMSQIALQTDTEIDMGISSANSTSMASILPRSAQEEQRLVPVTTCGNGDDSTSKLSRHLMVVSSMQTCPELSRPAQACPKYLKVIAKADTTDVTDIVNTNGETNEQKPIIILQSPVMKLEKINENINSPNKRMESSESINTNETTTIVLQPESLLQCHICCKKGFTMDKLKSHFLNGHRGTKEYQCSECPLKFCTNGGLSRHLKVHVSKEFWDCSICFESLPNEAQLKLHAQMHEDIEWSSIEPDSSQKDPIPTDPSDFLSVTGGIIENGAKVTVPEKVLIPIVGELGATDRLEENREPQRKEYSNKCKYCPKTFRKPSDLIRHVRTHTGERPYQCKFCEKSFAVKCTLDSHVKVHTGKKTFCCHVCNSLFATKGSLKVHMRLHTGSKPFKCPICDLRFRTSGHRKVHQLTHTRDNKESMKRKAKQLKVTAIAEVVAEVEKNVEKSVENPVYPSSITEQTIERSYPNLDTITIGASGMTNHITFNPDGTIINNNSMLSINESNQLVANLHFLLANGLVTIQADDTLLSEGTLSTDVNVTQNEINEENILLSTNIALGQHKQQQIIHNGTPTDNIVMTNQLPSCTDNNVHHQGRMINLSDCTSLVPVEAQNIVPEKKVQLQPQQQNLKQVSYGKTSNSKKECDICGKIFMKPCQVERHKRIHTGERPYKCGLCEKSFAQKTTLQMHQKAHTGDRPHPCPHCDYSFTQKGNLQTHLKRAHQLDTLEVKKLRRGQQQLFNAKFIQNNSDESRILNFDDISIVEYLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-