Oarm012892.1
Basic Information
- Insect
- Oxytorus armatus
- Gene Symbol
- -
- Assembly
- GCA_958009045.1
- Location
- OY253751.1:6366102-6369228[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-08 1.8e-05 24.5 0.1 3 39 17 53 15 56 0.91 2 2 3.2 3.6e+03 -2.0 0.0 28 38 415 426 415 429 0.87
Sequence Information
- Coding Sequence
- ATGGTTCGAATGTACGTGAGAAAAACAACGAGAGGTTGTTGGGACGAGAGACAAATGGTGGCGGCGATGAACGCGATTCTCGCTCGTAAAATGGGTTATATGAAATCGTCAAAGGTTTTCGGCATACCGAGATCAACGTTGCGACGAATAATGAAGAGATTGGAGGCTGACGGTGAGGTGAACATAAGAGTACCATTGGGAACTAACGCATCGGTATTTACAAAAGACGAGGAACAATATTTGGTGTCGCATTTGAATTCAATGGACAGCCGTTTGTTCACGGTGACGATACCGATAAAGCGTAAATTGGCATATCAATTGGcaacgaaaaatcgtaaatcaCACAAATGGAAGGACAACGTAGCGGGTCGCGAGTGGTTACGCGAATTCGTAAAGAGGCACAAACTAAATTGTCTAGCGATAGGACGACCGGTGACAAAGACAAAGCTCGCTTGTTTCAACAAAGAGGCCGTTATGAAATTTTACAATACCCTCGGCGAACTTTACGCAAGACACAATTTTACCGCCGACAGAATTTACAATTGTGACGAAACGTCGATAAGCTGCGACACTAAATGTAATGTAATTAACGGAACGAACGACACAAACAGAGGAACATCGGTAACGAATGATTCTGGTCATACGATAACCGTGGAAGTTTGTATGAGCGCGACAGGCTTGTTTATGCCTTTGCTATTTGTTTTTCCGCGAAAAACACCGGAGCCACAATTCACGAGCAATCTCATACTACCGTGTTACACACAGTGTAACGAGAGCGGCTGGATGAACAGCGAGATATTTGCATGGTGGTTAAGacactttataaaattttcacggtcAACCAAGGACAATCCGGTATTGTTACTGATGGACGGTGATGCGAGTCACACGACGAGTCTCGAGCTACTCGAAATGGCCGAGAATAATGGGGTTGTGATGTTGTGCTTGCCCGAATATTGTACCCACAAAGTTGGTCCGTTGGAGGTTGAATTTTTTGGTACATTGAGCAAGCATTATGTTTCGGCCGTTAAAGAATGGTCGTTGACGAATGTCGAAAAATCGCCCGGAATATCCGAAATTCCTATGATCTTCGAGCAAGCTTTCATTCAATCGGCCACCCTCGCTACAGCGGTTATTGCCTTTCGAAAAACTGGAATATGGCCTTTCAAGCCGAATACATTTAACGACAATGATTTCACGGGAATTGGTACGTCTCTACTTCCGCATCAAATTGTCGCGGCGGTACCGCACGAGTCTCTGCAACTTTCCCATGTGAATTCGTCAAACATCATTCGCACGACGAACAGCCCGAAAGAATCCAGCGTTAATCCCGTTTGTGAATCCTCATGGAAGCCCACGAATAATTGTGCTGCTAACGAAATTAGAGGTACGGCACCTACGAACTGCGTGGAAACTGTATTAGGACCACAAAATCAATTACCGAGGAAACGAATGTACACGGAGAACGAACCAGTGCCGGTGGCACTTTATcaatcgaatcattttcaaGAATCTCCAGTTCCGGGTCCCTCTTGGAAACCTCCGTCTAATCATGTAAACGAGATGAGATTATCCGCATCGTCGGCGTACGTCGAGGCTGTGCTTGGAGGGCCGCAAAATCATCCAACGAGAAACGTCGAACAATCCGAAGGTCCTGGATGCTCTAGCGATCCTGCTATGTACAGCATTATACCACACATGTTTTTGTGA
- Protein Sequence
- MVRMYVRKTTRGCWDERQMVAAMNAILARKMGYMKSSKVFGIPRSTLRRIMKRLEADGEVNIRVPLGTNASVFTKDEEQYLVSHLNSMDSRLFTVTIPIKRKLAYQLATKNRKSHKWKDNVAGREWLREFVKRHKLNCLAIGRPVTKTKLACFNKEAVMKFYNTLGELYARHNFTADRIYNCDETSISCDTKCNVINGTNDTNRGTSVTNDSGHTITVEVCMSATGLFMPLLFVFPRKTPEPQFTSNLILPCYTQCNESGWMNSEIFAWWLRHFIKFSRSTKDNPVLLLMDGDASHTTSLELLEMAENNGVVMLCLPEYCTHKVGPLEVEFFGTLSKHYVSAVKEWSLTNVEKSPGISEIPMIFEQAFIQSATLATAVIAFRKTGIWPFKPNTFNDNDFTGIGTSLLPHQIVAAVPHESLQLSHVNSSNIIRTTNSPKESSVNPVCESSWKPTNNCAANEIRGTAPTNCVETVLGPQNQLPRKRMYTENEPVPVALYQSNHFQESPVPGPSWKPPSNHVNEMRLSASSAYVEAVLGGPQNHPTRNVEQSEGPGCSSDPAMYSIIPHMFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -