Oarm015080.1
Basic Information
- Insect
- Oxytorus armatus
- Gene Symbol
- lola
- Assembly
- GCA_958009045.1
- Location
- OY253753.1:1712181-1721649[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-16 2.7e-13 49.6 0.0 2 42 429 470 428 473 0.94 2 2 3.7 4e+03 -2.2 0.0 30 42 473 486 472 487 0.81
Sequence Information
- Coding Sequence
- ATGTCTATGCAACAGTTCTGTTTACGATGGAACAATCATCAGCCAAATTTCATATCCGTCTTCTCGTCGCTGCTGAACAATGAGACTCTGGTGGACGTTACTTTGGCCGCCGAGGGTCGTCATCTTCAAGCTCACAAAGTCGTACTATCGGCGTGCAGCACATACTTTCAGTCCCTCTTCACCGTCAATCCCTGTCAGCATCCTATCGTCATTCTCAAAGATGTCAAATTCTCCGATCTCAAGATCATGGTCGATTTCATGTATTACGGCGAAGTGAATGTTTCCCAGGATCAATTGCCCTCGATAATCAAGACTGCCGAGAGTTTGAAGATCAAGGGTCTTGCGGAGATGCACACAGCCTCTCTGACAAAGTGGCCAAGCGGAAATAGCGAGATTGGTGGTGTTGATCGTGGAGAATCCTGTTCACCGAGTCCCTCGCCCTTGTCGCCTTCGTTTCGTCGAAAGCGTTTGCGCAAAACATCGACTGGTTCGACATCAGGCGGCTCGGCCGATAAACCCGAGGAAATAAACGAGATCACTCTCGTTGCTACGAATATCGTTAAACCCGAACCGCACATTGTAGCCCAGGAGGGCGGTGAAAATCTTAGACGTCCCATGAACACAACTACCGATACACAAGGCAGCATTGACGAAGATCAAATATCCATTaTGAGCAACATGGAGAGCAGTACAACGACAACGCCAGCTCAGAGCGAAGGTTCCTTGCAAGAAGTGAGCCATCAGACTGGCGGGAATATCGGTCAGAGTTCGGTGTCTTCTCAGCCGCCGGCCCACCAAGGATTGCAATGGACAATAATGGAGCATACGTATCCGCGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGGTCCAAGCCTCGTCGGCATTCACGACGCCCGAAATAACAGCAACATCGAGCATCAGCGAGCATCAGTATCAGTCGGGAGGTGGTACGAGCACGACAACAGCGCCGAGTTGCGCGCTGACGAACTACGCGAATTCTTCGTCGCACGGAACAATGCAGCACGGTTCAAACACgagcggcggtggcggtggtggcggcggaggtggtggcggcggtggcggaAATGGCAACGGAAATGGAAGTGGAAATGGTAGTGGAAATGGGGGTGGTAACGGCGTTGGTAACGGAGCTGGTAATGGAAATGGACAGGGTGGTGGACCATCGCCGGGCCCAACGCAGTGTCCCAGTAATTGTCAAAGTCCTTGCGCGAGTCCACAAGCGACCATAAAGAGAAAAAGATCGACGAATCCGCAGGccgatgaaaatttcataagaGCCCTCGAGGCGGTACGTTACGGCGGTATTGGATTTTGCAAAGCCGCGCGTATGTTCGGCGTCAACAATCGAACGCTTTGGCTCGAGTACAAGAAACGCGGCTATCCGAACAATCGTCCGAGCTTGAAGTCACGTGTTAAACAAGAAACAAATTCGTCACCGCCGCCGGCGGCAACCTCGCAAACCGTTAATTCACAAAGTCCAACGCCAATGGGACCACCAACGACACCTCACAGTACACACAATACACATCCGACTCACACGATGCTCACAGCTCACAGTCCTCACACAATGCTCTCGGGTTATATCGACAGTAGACACACGGATTATACACTGCCGAGCTCGACAATGCCGATCAATTTGCACGGCGTTAATTACAACTCTATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSSLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGNSEIGGVDRGESCSPSPSPLSPSFRRKRLRKTSTGSTSGGSADKPEEINEITLVATNIVKPEPHIVAQEGGENLRRPMNTTTDTQGSIDEDQISIMSNMESSTTTTPAQSEGSLQEVSHQTGGNIGQSSVSSQPPAHQGLQWTIMEHTYPRFALSSCQTNLSVQASSAFTTPEITATSSISEHQYQSGGGTSTTTAPSCALTNYANSSSHGTMQHGSNTSGGGGGGGGGGGGGGGNGNGNGSGNGSGNGGGNGVGNGAGNGNGQGGGPSPGPTQCPSNCQSPCASPQATIKRKRSTNPQADENFIRALEAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQETNSSPPPAATSQTVNSQSPTPMGPPTTPHSTHNTHPTHTMLTAHSPHTMLSGYIDSRHTDYTLPSSTMPINLHGVNYNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629212;
- 90% Identity
- iTF_01057005;
- 80% Identity
- iTF_01129444;