Oarm015541.1
Basic Information
- Insect
- Oxytorus armatus
- Gene Symbol
- klhl36
- Assembly
- GCA_958009045.1
- Location
- OY253753.1:13447771-13450024[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.0003 0.33 10.9 0.0 7 37 208 238 202 245 0.72 2 5 5e-11 5.5e-08 32.6 0.0 4 39 255 289 252 296 0.85 3 5 0.0063 6.9 6.7 0.0 7 34 310 336 306 341 0.84 4 5 2.7 2.9e+03 -1.7 0.0 32 45 351 365 350 365 0.85 5 5 1.5e-12 1.6e-09 37.5 0.2 4 39 367 402 364 408 0.91
Sequence Information
- Coding Sequence
- ATGTCAGCGACAATAACAACGAGCAACGATCAACCTCAAATCGAGAACTGCTTTTACAAATGGATCGATCATCGGAATCATCTTTCGGACGTTGTGAGACAGCTTCTCGAAGAGGAATGCCTGGTCGACGTGACTCTCGTCGCGGACGGAGAACGTATACCGGCTCATCGAATAGTACTGTGCTCTTGCAGTACTTTGTTTCAAGAAATACTTAGTCAAGCGAATGAGGAACACTCGACGATAATACTGAGTGATATATCAGCGCGGGACGTCAGATCTATAGTAGAATTTAGTTATCATGGAGAAGTTAGAATTCCCGTTGAGAATATCAGTAATTTACTGGAGGCTGCTCACTCGCTCAAAATTTGTGGTCTTATGGAGATCGATGGACTAGACGAGAACGATGCAATTATAAGTACCAAAGACGTGAGCGAAGGTCACCTGGAATCTTTGGAGGATTTTGAGGAATCTGGCGACAATGCGACGGATCCTTTGGAGAATCCACTGTCGTACAGAGACGTGTTAGAAAGTtgcaaaagaacgaaaaaaacattgtccGGTAAAAGTCGAAAACGTCGAAGAGAAATCCCGAAACGCGAGTACGACGACGATATGCTGGTATCTGCGATAAACGGTCTAAAATCTGGTCAAACTCTGGTAGAAGCTTCGACGAAGAACAATATACCGCGATCGACTCTCTACATGAGAGCCAAAGCCATGGGAATACAATTGAACGCTTCGAGAAATGAATATTCCGCGGAATGTATGAGAGCCGCGATAAACGCTGTTATCGAGGGTTCGAGCTTGCAGCACGCTTCTGACAAATATTTCATTCCCAAAACCGTGCTCTGGCGACGAATACAGAAAGAGGGATATCAGATATTACGCTCGGAGGTGAAACGATCGTACGGAACGGAAACTAGAGAGGCGGCGGTTAAAGCTCTTCAAAGCGGCGAAAAATTGACTAAAGTTTCACAGCGATTTCAGATACCAAAGACGACGTTGTTTCGCGACAAAGTAAAATTGGTGGATGAGGGTAAATTGCCCGGGACCTTTTGGAAGAAACGGAAAACCGAAAATGAGGACATAAAACGAATGCGCCTTGAGGAGGCTGTTGCCGCTTGCAGAGGTGGCAAAATGTCGCAAGCAGCGGCGTCGATGGCTTACAGAATACCGAAAACAACGATATGGCGAAGATTACAACAGGACGGAAGAACGAAAAAACATGCGGAATTAACGAGAGGATCGGAAAGTTCATTGGACAATGAAGAGGCACTTTGCGACGAGAAGAAGGAACGAGATACATCTGGGTTCGATCTTTGCGAGgTATCTTCGGATATGCCAATAACTTACATAGATCCGAATCTACCGGCGGATTCTGTTATAATATTGACCACAGGAGACGTAGACGACCTAAATCTCGACGAGGCCCAACAAATAATCGTTAATCAAGATTCGGGACAGGAGTATGTACGATGTCTGAATATATCTGAAAACACAGAGACGGCAGCCTATCAGCTGGCAGAGAGCTAG
- Protein Sequence
- MSATITTSNDQPQIENCFYKWIDHRNHLSDVVRQLLEEECLVDVTLVADGERIPAHRIVLCSCSTLFQEILSQANEEHSTIILSDISARDVRSIVEFSYHGEVRIPVENISNLLEAAHSLKICGLMEIDGLDENDAIISTKDVSEGHLESLEDFEESGDNATDPLENPLSYRDVLESCKRTKKTLSGKSRKRRREIPKREYDDDMLVSAINGLKSGQTLVEASTKNNIPRSTLYMRAKAMGIQLNASRNEYSAECMRAAINAVIEGSSLQHASDKYFIPKTVLWRRIQKEGYQILRSEVKRSYGTETREAAVKALQSGEKLTKVSQRFQIPKTTLFRDKVKLVDEGKLPGTFWKKRKTENEDIKRMRLEEAVAACRGGKMSQAAASMAYRIPKTTIWRRLQQDGRTKKHAELTRGSESSLDNEEALCDEKKERDTSGFDLCEVSSDMPITYIDPNLPADSVIILTTGDVDDLNLDEAQQIIVNQDSGQEYVRCLNISENTETAAYQLAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01129469;
- 90% Identity
- iTF_01129469;
- 80% Identity
- iTF_01129469;