Opom018455.1
Basic Information
- Insect
- Oxystoma pomonae
- Gene Symbol
- GATA5
- Assembly
- GCA_963921995.1
- Location
- OY998166.1:108896409-108907473[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-18 4.4e-14 53.0 3.3 1 34 40 72 40 74 0.97 2 2 4.2e-18 2.7e-14 53.7 3.4 1 35 94 127 94 128 0.97
Sequence Information
- Coding Sequence
- atgaaaaaacctatttacattttattaaatctcaaatatatgaacaaaagcacgttcgatttaaataatacccTCGACACTCTCCGTACGGCCGAATTCTTTACCGAAGGCAGGGAATGCGTCAATTGCGGCGCCATTGATACGCCACTGTGGCGTCGAGACAACACCGGTCATTATTTGTGCAACGCTTGTGGACTCTATCATAAGATGAACGGGATGAACCGGCCCTTGGTCAAGCAGCCTCGCCGATTgtcAAGCTCACGTCGGGCAGGCTTGACATGCATCAACTGTCAGACTGTCAACACTCCTCTGTGGAGACGGAACACTCAAGGGGAGCCCGTTTGCAACGCTTGCGGCCTATATTACAAATTGCACAACGTCCAAAGGCCCGTGTCGATGAAAAAAGATACCATACAGaCAAGAAAAAGGAAACAAAAGGGCAGCAAAACTAGGCCGGTGAGTGCAAAAGCTTGCAATGCAGCAGCCGCCAAAAAAGACGTTTATGCCGAGAACAGGATAAAGGCAGAAGCAATAAAGATTGAGACAACTCCTTTGGACAATTTCGACATGTCCCACGTGCAACAACACCTCACCGCCTCGAGCTTCCTCTACAACCAGCCTCATCACCGACAAAGTCCAACCTCATACACGTCGAATTCACCTCACAACCTCGCTTACCAGTCTCATTATGACGTTTTGCAGCAAAATCACCCGATCAGTCCGCAGAGTTCCAATTCCGATATCAACTCCGAACGCGGGCACTCCCCCAgctattttaacaataataacaaCAACAATAACAACACCAAAGTTATCATGAGCCTGGAACATTCCGGTATGGAAAGCGTGGACCATAACATGGAAAGGATTTCCGTGGTTTCCACCATGGAATCGCAATAA
- Protein Sequence
- MKKPIYILLNLKYMNKSTFDLNNTLDTLRTAEFFTEGRECVNCGAIDTPLWRRDNTGHYLCNACGLYHKMNGMNRPLVKQPRRLSSSRRAGLTCINCQTVNTPLWRRNTQGEPVCNACGLYYKLHNVQRPVSMKKDTIQTRKRKQKGSKTRPVSAKACNAAAAKKDVYAENRIKAEAIKIETTPLDNFDMSHVQQHLTASSFLYNQPHHRQSPTSYTSNSPHNLAYQSHYDVLQQNHPISPQSSNSDINSERGHSPSYFNNNNNNNNNTKVIMSLEHSGMESVDHNMERISVVSTMESQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -