Opom018458.1
Basic Information
- Insect
- Oxystoma pomonae
- Gene Symbol
- GATA5
- Assembly
- GCA_963921995.1
- Location
- OY998166.1:108943014-108985591[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 7.8e-14 52.2 2.3 1 35 384 417 384 418 0.97 2 2 1e-18 6.5e-15 55.7 5.4 1 35 440 473 440 474 0.98
Sequence Information
- Coding Sequence
- ATGAGTGCTGAAAAAGGAAACAAAGTTAACAGCTCCTCCAATAAAGAAATAGAAGAAACAAAACATGAATTAGAAGAACCAGAGAAAAACCAAAGCTTATTAGGAATAAAAGATGAAACCGTAAAAGAGGAAACCGAACAATCCGAGATTAAGGAAGAAGACGATCAACAGATTactgaagaaaaattaaaaacggacgaaaattcaaaccacaACATAGAAAATGCCCTAAATCATACGCCACCTAATGCTTCAGTTATAAGAAGAAACGTGTTAACTTCGGCCGGCACAATCGAAGCAGCTGAAAATTTAGAAGTTACAAACGAAGAAATAGTAAATTCGTCAGAAACCCCCGAAGAAATGTCCCCACAAGAAGAAAAACCGACGATAACAAATTCGGACGCAATGCCTTACGAGACAATATATGTGCGTGAAAATTTTCCGGgcataaaaaatattgccacGGGCGTGAAAACATTTAGTTCGCAAAACGGCGAGGAAGTGTTTCAAGGACAGGCTACGTATACGCAAGCGGGAGAGACTGTTTACACGACAACTGTTCAGATTAGTGAAGGGGGTGACATAGTACCGGTGACAATAGAAGCCGCCATCGAAAATCCCAACGACTATGCCAATTTGGAAACGGCCAACCACTACAGCAACGGAGGTCACCAGTACGCGGTAACAGACGGACCTCAGTATCTTCAGCAGCACCAGTATAGCTCGATGCAACAGTTTATCGATAGAAACAGTGGAGAGAGTCCCCCTACTACTAATAATTTGTTGTTTAGGAACAACGATCCTACCTTGGCGGCATCTGGAAGATATCAGAACTTCGACATATCAAACCACCAGCAAATCAACCAAATCACCCTCACATCGCCTCATTCGGGCGAATCCTACCAATTCGCCCCAAGCGGCGGCGGATCCGGTAACTGGGCCCCAGCAACCGGCCATTCATACCAACAGCAGTACCAAGGAAACGTGGTAGCCCACCACCACCACGCGGACGGTACTTCCCaacagcagcagcagcagcagcagtaCTTTAACGCCGCCACGTGGCATCAGCAGGCCGGTGCGGGCAGTGATGGCCTGGATGAATCCGGCGTCCCTCAGCGACCCCCTTCCGAGGTACTAGTCAAAGAGTGCGTGAATTGTGGCGCGAGTGTCACTCCTCTGTGGCGCAGGGACGGCACCGGGCACTATCTTTGCAACGCGTGTGGGCTCTATAACAAAATTAATGGTGTCAATCGACCGCCCGTGAGGCCCGCTAAAAAACCACAGGCGACTGGGAACAGAAGAAACGGAGTTATATGTGCCAATTGTAAAACTTCAAACACAACCTTATGGAGGCGAAATAATCAAGGAGAACCAGTATGCAATGCTTGTGGATTATACTTCAAACTTCATGGGgttaacAGACCGATAAGTATGAAAAAGGAAGGTATTCAAACCAGGAAAAGAAGGCCCAAAAGTGCAGCATCCGTGCACAATGGTATGGCAGTGGGCGTACATGGACAAAGACTGGgcACTCAGGGTCTCTACTTCCCACAAGAAATGGATTTACCTGTCGACCAGTACCAGCTGCCAACCGTAGCGTACCAAACCGGAGCACCGGCGGGATACAGACACCAGTTGGTACCTCCCGAGCATCTAAACAGACAAATGCCTAACGTCCAGCCATTGCAACCGATAATTTTGGCGACGGGAGAAGACGACCAGACCACCGTCATAACGACTACCAGCCTCACGTCGACCTCCTCGCATCAACCGAATGTGGTAGTGAGATACCAACAAGAGACTGAGGATGAGGAAACCACAATGACCACACATATTATTGTCAATCCtaagaattaa
- Protein Sequence
- MSAEKGNKVNSSSNKEIEETKHELEEPEKNQSLLGIKDETVKEETEQSEIKEEDDQQITEEKLKTDENSNHNIENALNHTPPNASVIRRNVLTSAGTIEAAENLEVTNEEIVNSSETPEEMSPQEEKPTITNSDAMPYETIYVRENFPGIKNIATGVKTFSSQNGEEVFQGQATYTQAGETVYTTTVQISEGGDIVPVTIEAAIENPNDYANLETANHYSNGGHQYAVTDGPQYLQQHQYSSMQQFIDRNSGESPPTTNNLLFRNNDPTLAASGRYQNFDISNHQQINQITLTSPHSGESYQFAPSGGGSGNWAPATGHSYQQQYQGNVVAHHHHADGTSQQQQQQQQYFNAATWHQQAGAGSDGLDESGVPQRPPSEVLVKECVNCGASVTPLWRRDGTGHYLCNACGLYNKINGVNRPPVRPAKKPQATGNRRNGVICANCKTSNTTLWRRNNQGEPVCNACGLYFKLHGVNRPISMKKEGIQTRKRRPKSAASVHNGMAVGVHGQRLGTQGLYFPQEMDLPVDQYQLPTVAYQTGAPAGYRHQLVPPEHLNRQMPNVQPLQPIILATGEDDQTTVITTTSLTSTSSHQPNVVVRYQQETEDEETTMTTHIIVNPKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -