Basic Information

Insect: Oxystoma pomonae
Gene Symbol: SUV39H2
Assembly: GCA_963921995.1
Location: OY998172.1:1912630-1955074[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 8.3e-05 0.012 17.3 2.3 3 23 12 33 10 33 0.95

2 7 0.00046 0.065 15.0 0.7 2 23 168 189 167 189 0.96

3 7 2.2e-05 0.003 19.1 0.3 1 23 194 216 194 216 0.97

4 7 5.1e-05 0.0072 18.0 4.6 3 23 224 245 222 245 0.96

5 7 1.3e-05 0.0018 19.9 1.0 3 23 280 301 278 301 0.96

6 7 6.6e-06 0.00093 20.8 0.7 3 23 382 403 380 403 0.96

7 7 6.3e-05 0.0089 17.7 1.3 2 23 465 487 464 487 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	8.3e-05	0.012	17.3	2.3	3	23	12	33	10	33	0.95
2	7	0.00046	0.065	15.0	0.7	2	23	168	189	167	189	0.96
3	7	2.2e-05	0.003	19.1	0.3	1	23	194	216	194	216	0.97
4	7	5.1e-05	0.0072	18.0	4.6	3	23	224	245	222	245	0.96
5	7	1.3e-05	0.0018	19.9	1.0	3	23	280	301	278	301	0.96
6	7	6.6e-06	0.00093	20.8	0.7	3	23	382	403	380	403	0.96
7	7	6.3e-05	0.0089	17.7	1.3	2	23	465	487	464	487	0.94

Sequence Information

Coding Sequence: ATGCTGAGCCACAATCCCAATTGTTCGTGGTTTTGTGACATTTGTACAAAAGGATTCAAACGAAACGATAATTTTAAACAGCATTTAATTGTCTGCCACAAATTAAACCCGAAAATGCTGAAGAGAGCTCTGGCCAGAGCTCGGATTGGTGCGCAAAACCAAGAtgataagaataaaaatatttctgacaAACAGACAGGAAACATTGCGTTGACAAAGGTTACTGATGTTCTTGTAAAAGACACAGTAACCACTAAAGAAGTGGTATCAGAAGAAGTGCCCAAATCAGGTTCAAAGACAATTGAAATACGTGAATCAAAAAATTCCGActctgtaaaaattaaaactaaatctGAAACTAATAATAGTGATTTAATAGGTATAGGTATCGAAAAAAATCAAGTGGCGGTTGAAAATGGAACACCGAACTGTAGTACTAAACCCAGTTCAGATTCAAagaagataaaaattttaactaaaccTGATGGAAGTAcgagtttaaaatgtttaaaatgtccACAAACCTATTCAGACAAAGAGAAACTTGAAACTCATCTTTTAAACCACAAGATAAGACTTTATGTTTGTAATGTATGTGGAAATACATATCCCTACAAATCAAATTATAATAGACATATATTAGGCCACGATCCAAATCATTCATGGTTCTGTCACTTCTGCACAAAAAGATTCAAACGATCCGATTATTTAAAACGGCACTTAACTACCGCTCATGGCTTAAATTGTAAAAAGTTAAGAAGAGCTGATGTATTTGGAAATACCTTTGCCACCACATCAAGTCGTAAGTTAAGCCACGATCCAAATCGTTCATGGTTCTGtgacgtttgtaaaaaaagattCAAACGAATCGATAATTTAAAACGGCATGTAAGTACCGTCCATAGCTTAAACTCTAAAAAGCTAAGAAGAGCTCTAGCTGGAGCTCGGATTCGTGCGCCAAACAATCAAAAGTATAAGAAGAAAAATATTGCCGACAAACACAAAGGAAATACTGCGCTGGTAGGAGTCAATGATATTCTTGTAAAAGACACCTTAACAATCGAAGAATTGCAAGTAAACTTTGGAGAAGAAGTATCAGAAGATGCGATCAAATCAGGCCACGATCCAAATCATTCATGGTTTTGTGACATTTGTAAAAAAGGATTCAAACGAATCGATAATTTAAAACGGCACTTAAGTACCGTTCATGACTTAAACTCTAAAAAGCTAAGAAGAGCTCTAGCTGGAGCTCGGATTCGTGCGCAAAACAACCAAAAGGATAAGAACACAAATATTTCCGACAAACACAAAGGAAATACTGTGCTGGCAAACTTTGGAGAAGAAGTATCAGAAGATGTGCTTAAATCAGGCCACGATCCAAATCATTCATGCGTTTGTGACGTTTGTAAAAAAGGATTCAAGCGAATCGATAGTTTAAAACGGCACTTAAGTATCGTCCATGCCTTAAACTCTAAAAAGCTAAGAAGAGCTCTAGCTGGAGCTCGGATTCGTGCGCAAAACAACCAAAAGGATAAGAACACAAATATTTCTGACAAACACAAAGGAAATACTGCGCTGGCAGAAGTTAATGATATTCTTGTAAAAGAAACCTTAAACATGGAAGAATTGCAAGTAAATGttgcagaaaaaatatcagatGACGTGCTCAAATCAGCCGAAAAAAACTGTACCAACAATAATATTGACACCAATATTATGTCTACTAATAGTGAAGATGTAGCCTCTGATCAGCATTCCCAATTAGTAGTGAAAGTAGCTAAGAGTAATAATGAAACTTTAATCCAAAATACTCAATTACAAGTAGAAATGGAAGAATGCATAGTAGAGAGTGAGGAAGACAGTCAGGTTAGCACTATAAACAAAATCCGCTATAACGACAAGGGCGTCATCACGTGGCCCCCGGACGTCGGCGGTCGAAAGGTCGACATGCAGTCCGCCCTGATGGACCTCAAGGACTGGGAGCAACGGggtcaaaaaagaaaaagatccATTGGCAGAGCCAAGGCCCAGGGGACGACCTACAGCAGAAAGTACGTTGtggagaaaattgaaaaaatggaaTTCGACCAGGCTGAGAGGGTGCACCTGTTCTACGTAAAATGGGAGGATTACCATCACGAATGTAACACGTGGGAGCCATTGGAACATTTAGACGGTGCCGAGCATATTGTATCCCAGTTTTTGGAAGAAAAGTACACCGAAGAGACTATCAAACAATTGGCTGACAAGGTCGGGTTGGAATTGAACGCGATCACTGACGAAACGTTGTTTAGTGCGCTGCCGGGTCCCCCAGGAAAGAAAGACCTTAGTCAGGTTCCTAGTAAATTCACTGCacaaagaaaacttttaaagttCCTCGACCGGAATATCCATCCAAGTTATGTTAGAATGACGGAGGATTGTAAAAAGACCCTCCTTACCTACCTATTAGTATTGAAACGAGAAACACAATCGGCCAGGCTTAAAAAATGGGAAAATATAATCAACAAAATGGACAAATCAGAGGCGTACATAACTGTGGAAAATACCGTGGATTTGGAACCTCCGCCCGAAAACTTTTGTTACATAAACGGCTACGTACCAACCGGCAACATCGTAATACCCAGCACGCCAGATACATATTGTCTATGTACCGATTGCGGACCGGGGATCAAATCCTGCTGCGGGAAGCATGACCACAACGCTTTTACGTACACGAAGACTAGCAAAATGAACGTGAATCCGGGAAATGCAATATACGAATGCAACATGCTGTGCAAGTGCGGTCCTTCTTGTCGGAACCGGGTGGTTCAGCACGGTCGCAAGGTACCGCTGTGTATATTTCGGACTGACAACGGACGAGGGTGGGGAGTTAAGgtATTAAGAAAAATAGCCTGCGGCGAGTTCGTGTGCGAGTATGTGGGCGAAGTCATCGATCACGAGGAAGCGGAAAGGAGAGGGAAAGCATACGATGCCGAAGgtcGCACCTATTTGTTCGATTTGGACTACAACAGCCGAGACAACCTGTATACGGTCGACGCGGCGAAATATGGCAACGTCTCTCACTTTATCAACCACTCCTGCGAGCCTAACTTGGGGGTTTACGCGACCTGGATTAACTGTCAAGATCCCAATTTGCCCAGGCTGGCGCTCTTCGCCCTCAGAGAGGTCCAAAAAGGCGAAGAACTGACGTTCGACTACATGATGAACATCGACGAGCCGATCATCAAGCCGAAAACGCCCGAGAAGACGGGCGGCCGACAAAAGCTCGACACGCCCGAAAAGGGCGCGCTCACCCAAAGCGACAGGCCGACGTGGTGTGCCTTCAAGGGACAGTTCACCAAAATGACGAGTAGGGCTTAA
Protein Sequence: MLSHNPNCSWFCDICTKGFKRNDNFKQHLIVCHKLNPKMLKRALARARIGAQNQDDKNKNISDKQTGNIALTKVTDVLVKDTVTTKEVVSEEVPKSGSKTIEIRESKNSDSVKIKTKSETNNSDLIGIGIEKNQVAVENGTPNCSTKPSSDSKKIKILTKPDGSTSLKCLKCPQTYSDKEKLETHLLNHKIRLYVCNVCGNTYPYKSNYNRHILGHDPNHSWFCHFCTKRFKRSDYLKRHLTTAHGLNCKKLRRADVFGNTFATTSSRKLSHDPNRSWFCDVCKKRFKRIDNLKRHVSTVHSLNSKKLRRALAGARIRAPNNQKYKKKNIADKHKGNTALVGVNDILVKDTLTIEELQVNFGEEVSEDAIKSGHDPNHSWFCDICKKGFKRIDNLKRHLSTVHDLNSKKLRRALAGARIRAQNNQKDKNTNISDKHKGNTVLANFGEEVSEDVLKSGHDPNHSCVCDVCKKGFKRIDSLKRHLSIVHALNSKKLRRALAGARIRAQNNQKDKNTNISDKHKGNTALAEVNDILVKETLNMEELQVNVAEKISDDVLKSAEKNCTNNNIDTNIMSTNSEDVASDQHSQLVVKVAKSNNETLIQNTQLQVEMEECIVESEEDSQVSTINKIRYNDKGVITWPPDVGGRKVDMQSALMDLKDWEQRGQKRKRSIGRAKAQGTTYSRKYVVEKIEKMEFDQAERVHLFYVKWEDYHHECNTWEPLEHLDGAEHIVSQFLEEKYTEETIKQLADKVGLELNAITDETLFSALPGPPGKKDLSQVPSKFTAQRKLLKFLDRNIHPSYVRMTEDCKKTLLTYLLVLKRETQSARLKKWENIINKMDKSEAYITVENTVDLEPPPENFCYINGYVPTGNIVIPSTPDTYCLCTDCGPGIKSCCGKHDHNAFTYTKTSKMNVNPGNAIYECNMLCKCGPSCRNRVVQHGRKVPLCIFRTDNGRGWGVKVLRKIACGEFVCEYVGEVIDHEEAERRGKAYDAEGRTYLFDLDYNSRDNLYTVDAAKYGNVSHFINHSCEPNLGVYATWINCQDPNLPRLALFALREVQKGEELTFDYMMNIDEPIIKPKTPEKTGGRQKLDTPEKGALTQSDRPTWCAFKGQFTKMTSRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01128690;
90% Identity: iTF_01128690;
80% Identity: iTF_01128690;