Basic Information

Insect: Oxystoma pomonae
Gene Symbol: HINFP
Assembly: GCA_963921995.1
Location: OY998163.1:139558553-139574935[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.011 1.6 10.6 0.5 1 22 294 315 294 318 0.90

2 12 0.34 48 5.9 2.2 1 23 324 348 324 348 0.96

3 12 0.0015 0.21 13.4 7.6 1 23 354 377 354 377 0.96

4 12 0.00048 0.067 14.9 7.7 1 23 383 405 383 405 0.97

5 12 0.017 2.5 10.0 0.7 2 23 411 431 410 431 0.84

6 12 0.0046 0.65 11.8 7.8 1 23 451 473 451 473 0.99

7 12 2e-05 0.0028 19.2 0.5 1 23 478 501 478 501 0.97

8 12 0.003 0.42 12.4 2.5 1 23 506 529 506 529 0.96

9 12 5.1e-05 0.0071 18.0 1.1 1 23 537 559 537 559 0.99

10 12 6.8e-07 9.5e-05 23.9 3.3 1 23 565 587 565 587 0.98

11 12 1.3e-05 0.0018 19.8 0.7 1 23 593 615 593 615 0.98

12 12 0.00014 0.02 16.6 0.4 1 23 648 671 648 671 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.011	1.6	10.6	0.5	1	22	294	315	294	318	0.90
2	12	0.34	48	5.9	2.2	1	23	324	348	324	348	0.96
3	12	0.0015	0.21	13.4	7.6	1	23	354	377	354	377	0.96
4	12	0.00048	0.067	14.9	7.7	1	23	383	405	383	405	0.97
5	12	0.017	2.5	10.0	0.7	2	23	411	431	410	431	0.84
6	12	0.0046	0.65	11.8	7.8	1	23	451	473	451	473	0.99
7	12	2e-05	0.0028	19.2	0.5	1	23	478	501	478	501	0.97
8	12	0.003	0.42	12.4	2.5	1	23	506	529	506	529	0.96
9	12	5.1e-05	0.0071	18.0	1.1	1	23	537	559	537	559	0.99
10	12	6.8e-07	9.5e-05	23.9	3.3	1	23	565	587	565	587	0.98
11	12	1.3e-05	0.0018	19.8	0.7	1	23	593	615	593	615	0.98
12	12	0.00014	0.02	16.6	0.4	1	23	648	671	648	671	0.93

Sequence Information

Coding Sequence: ATGGAAACTGAGGAAATCATTGAAATCGTGGAAGAAGTGATCACGGCCTCATTTGACGTGATCTGCAGGGCTTGCCTGGAAAAAAAGGACTTGTTGTTTCCCATCCTAGATGTGCACTGGGGCGAGATTTGGCTCAGGGACGTGTTGTATCGTCTGTTTAGGCCCAAgGAAAGAATTGAGAAGAGCCTCCCCCAAAGCATGTGCAGAACATGCATTGAAGAATTGTATGTTATTCATcagtttcttgaaaaatatcatGGTTCAACTAAGATCTTGTTAGAAGCTTTAGATAAAGatgAAAAAAGTGACCTTGAACTGATAAAAATCGCCTCTATTGAATATCAGAAAAAGTATGACTCCTCAAACAAAACAGcagaaaattatttgaaaacgATAAGCAAAGAACATAAAGATTTTGAACTTACAACTGAAGTACAGGTTGACAAGGAGCAGTGTGAAGAGTACATTATTGGGATTACTGATGCCGAGACCAAACAGGCGGGAGATGAGGAAAGTAATAATGATGATAATGGAAAAAATGAAACCAGTTTTGACAATGACTCTCCAGAATATATTGATAAAGGTCAAATTATTGGGGAGGAcgaaaatgatgaaaaaattcaaattgaaattgaaGACAATGCAATACCAGATGAAGAAAATTCagaagaaaatatgaaaataatacCCTATGATGATTCTCGAGGTGATGATAACGATGCTGATGAAGGTGAAGCTGTCGATGATCCCAGTTTTAATGATGATGATCAAGATGAAAAATTAGAATCTCCCAGCAAGAAAATAAGGATAGGATCCACTGAGGTTTTAGCGGCAGAGGGCCCGCCAGTTGCGAGCTTGCGCAAACTTCAAGAGGTCTGGTACATGTGCTCGACATGTGACGCGCCGTTCGACAGCTACGTTAAGCTCGAACAGCACAAAAACAAGGCGAAACACAAAGAAATACAGATTTTCGTTTGTCCGTTTCCCAATTGCAATAAAAGGTACAAATGGCACTCTAGATTTGTCGACCACTACCGCATTCACGTGGAAGAGCGACCGTTCCAGTGCGCCCACtgcgataaatgttttaaaacacACGATCACGCTTCTGCGCACGTTAGGGAGCAACATGTTAACGTTGCCAGTCACGTTTGTTCCATctgtaaaaaaaCTTTCAAACGCAAATTTCACCTAGACTTGCACTTTAAAACCCACACGGGAGAAAAAAGCGTCTGTTCCTTCTGCGGAAAGTCGTTTTCGGGCTATTCCTTGTACATGCACGAACAAAGGCACAAAATCGCTTTGGGATTGATGGAGCCTAAGCCCAAAGATACAGGTCCAAAACCGGAATTTCAATGTCACATTTGTTCACAACAGTTAAGTTCCAAACACTGTTTGGAAAAGCATATCCAAAGGCACGGTCCGAAGAACTACAAGTGTACCGAGTGTCCGGCCTCTTACAGTTCTCAAGATCATCTGCTTGGGCATATCAACATAAAACATACAGatggCGAACACATCTGCTCTTTCTGCAACAAAGACCTCCGACAGAAATACTTTTTGGAGCAGCACCAGAAAGTAGCGCACCCCGGGAAAAAAATTAGCCTATACAAATGCAATCTTTGCCAGAAAGATTTCAGCAATTCTATATCGTATAATGAGCACGTGAAAGTACATAACGGCGCGACGAATCATTATTGCCAAATCTGCGACAAATACTTCGCGAGCGAAAGCAAGCTGAACCGGCACATGCGCACTCACACGGGCGACAAGCCTTTTTCGTGCCTGATCTGTGAAAAGAGATTCGCCAGCAAGGATTATCTCAAGATCCACACGCAAATTCATAACAAATCAAAaaaattcGTCTTCAGACGCGACTCCTACCAAGACAGTGACCCATTGTCGACAGTAACGGAGACAAAACTAGAAAGAATTGAACATTTTGAATGCGATTACTGTGAAAAAACCTTCACGGAAGAAGACCTTTTAAACGATCATTTCCAGGAGGAACATGCCGAAGTTACTGTGGTTGAGATGGTCGAATAG
Protein Sequence: METEEIIEIVEEVITASFDVICRACLEKKDLLFPILDVHWGEIWLRDVLYRLFRPKERIEKSLPQSMCRTCIEELYVIHQFLEKYHGSTKILLEALDKDEKSDLELIKIASIEYQKKYDSSNKTAENYLKTISKEHKDFELTTEVQVDKEQCEEYIIGITDAETKQAGDEESNNDDNGKNETSFDNDSPEYIDKGQIIGEDENDEKIQIEIEDNAIPDEENSEENMKIIPYDDSRGDDNDADEGEAVDDPSFNDDDQDEKLESPSKKIRIGSTEVLAAEGPPVASLRKLQEVWYMCSTCDAPFDSYVKLEQHKNKAKHKEIQIFVCPFPNCNKRYKWHSRFVDHYRIHVEERPFQCAHCDKCFKTHDHASAHVREQHVNVASHVCSICKKTFKRKFHLDLHFKTHTGEKSVCSFCGKSFSGYSLYMHEQRHKIALGLMEPKPKDTGPKPEFQCHICSQQLSSKHCLEKHIQRHGPKNYKCTECPASYSSQDHLLGHINIKHTDGEHICSFCNKDLRQKYFLEQHQKVAHPGKKISLYKCNLCQKDFSNSISYNEHVKVHNGATNHYCQICDKYFASESKLNRHMRTHTGDKPFSCLICEKRFASKDYLKIHTQIHNKSKKFVFRRDSYQDSDPLSTVTETKLERIEHFECDYCEKTFTEEDLLNDHFQEEHAEVTVVEMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -