Basic Information

Insect: Oxystoma pomonae
Gene Symbol: ZFX
Assembly: GCA_963921995.1
Location: OY998170.1:37942025-37943515[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00021 0.03 16.0 2.4 1 23 11 33 11 33 0.97

2 12 0.00067 0.094 14.5 0.3 1 23 72 94 72 94 0.98

3 12 3.8e-05 0.0053 18.4 0.1 1 20 100 119 100 120 0.97

4 12 7.8e-05 0.011 17.4 1.9 1 23 133 155 133 155 0.98

5 12 6.4e-07 9e-05 24.0 0.3 1 23 161 183 161 183 0.99

6 12 0.011 1.5 10.7 2.4 1 23 189 211 189 211 0.98

7 12 5.4e-05 0.0076 17.9 2.0 1 21 217 237 217 240 0.95

8 12 0.076 11 8.0 6.1 1 23 246 266 246 266 0.97

9 12 1.7e-06 0.00023 22.7 1.1 3 23 274 294 273 294 0.99

10 12 1.7e-06 0.00024 22.6 1.3 1 23 300 322 300 322 0.99

11 12 0.0096 1.3 10.8 2.2 2 21 329 348 328 351 0.92

12 12 0.00036 0.05 15.3 1.9 1 19 357 375 357 377 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00021	0.03	16.0	2.4	1	23	11	33	11	33	0.97
2	12	0.00067	0.094	14.5	0.3	1	23	72	94	72	94	0.98
3	12	3.8e-05	0.0053	18.4	0.1	1	20	100	119	100	120	0.97
4	12	7.8e-05	0.011	17.4	1.9	1	23	133	155	133	155	0.98
5	12	6.4e-07	9e-05	24.0	0.3	1	23	161	183	161	183	0.99
6	12	0.011	1.5	10.7	2.4	1	23	189	211	189	211	0.98
7	12	5.4e-05	0.0076	17.9	2.0	1	21	217	237	217	240	0.95
8	12	0.076	11	8.0	6.1	1	23	246	266	246	266	0.97
9	12	1.7e-06	0.00023	22.7	1.1	3	23	274	294	273	294	0.99
10	12	1.7e-06	0.00024	22.6	1.3	1	23	300	322	300	322	0.99
11	12	0.0096	1.3	10.8	2.2	2	21	329	348	328	351	0.92
12	12	0.00036	0.05	15.3	1.9	1	19	357	375	357	377	0.96

Sequence Information

Coding Sequence: ATGGCATACAAAGCAcgaaaaactgtaaaatacAATTGCGAACTTTGTAGCAAAAATTTCGCAAGTATTCACAATTTAACCAAACATAACAAGGTGCATACTATTAAGGATTTAAGTGTCCAGagcaaaattaaacaaaatacgaagattaatgaagaaaaaatagaTTTAGAAGTCAAAGACAAATTAATTCAGGCGGAAAAAGTTAGAAACTACCCTTGTAATCTTTGCGCCAAAAGCTTCTTGGGAAAAAACGACTTAAGAAAACACGTACGCATTCACACAAACGAACGTCCCTACGTTTGCAACGTCTGCGGCTTCGGTTTTAAACAGGCAGGGTCGTTAAAAAACCACATCTACTGCAAACATTCTCCGGGCCTTCAAAGCACCGAAATCTTTGTCTGCCAATATTGTGACAAACATTTTCCCATTAAAGAACggttaaaattacatttgagAGTCCATACCAATGAGCGTCCCTACAAATGCACAGAATGTCCGAAAAATTTCGCTCGAGGGGGCCAGCTGTCTCAACATATGCGAGTGCACACCAAAGCCAAGCCGTACGTGTGTCACGTGTGTGAAAGTTCATTTACTTGCGGGGCCAACTTGAAAGCGCATTTAAATAGGCACCTGGATATTCGACAATTCGTATGTGATATCTGTGGGAAGTCGTTTTTGAGAAAGGATGCCTTGCGGAAACATTTGAACTGTACTCATGCCAACCTTCGGGCCTTTCATTGCAAGATAtgcaacaaaaatttcaaaggGCATTTGCCTCAACATATGAGGACACATTCTAAAAACAAGCCCCACGGCTGTGGACACTGCGGCACTCGTTTTGCCCAAAGATCTCAACTGACGGTTCACCAAAGGATTCACAGCGGTGAAAGACCCTACAGATGTCAGGTTTGTTGGAAGGCCTTTGCTCACAGTACGGCTTTGAAGCTGCACATTCGACGACACACCGGTGAAAAGCCCTTTTTATGTGTTTTGTGTAATACTGGGTTTTCTCAGGTACCCCATTTGAAAAAACACATGCTGTGCATCCACAAGAGCAACAAATCCTATTACTGTGAGTTTtgtaaaacgttttttaaaagtaaaagcgAGCTACAAAATCACGAAGATAATAAGTGCAAAAAGAAACCGAAAACTGAGAACgaaagtaaaattaaaggtgAATCTATCGAGCCTCCAATGTCCCTAAGTAAAATGAGGTTGCTTTTGGCCGtactattgaaaaaaatctcgACTGCGGAAAGACTAAAGGAGCTCCGATTTAACAAAAGGTTGATTGATGATATTTTGGTGGACTCAATTATCCATTCTGGCAGAAAGCCTTGTAAAATTGAAGGGACCTCCGTCGCggagaaattaaaaagaaatatccaGATTTTGTTAGAATGGACTATACCAGAAAAGTTTATGGAAAAGTTCAAAAACGAGCAAAGGAGTACAGAGGAATTGCTGGAGGAATTAACGTcttaa
Protein Sequence: MAYKARKTVKYNCELCSKNFASIHNLTKHNKVHTIKDLSVQSKIKQNTKINEEKIDLEVKDKLIQAEKVRNYPCNLCAKSFLGKNDLRKHVRIHTNERPYVCNVCGFGFKQAGSLKNHIYCKHSPGLQSTEIFVCQYCDKHFPIKERLKLHLRVHTNERPYKCTECPKNFARGGQLSQHMRVHTKAKPYVCHVCESSFTCGANLKAHLNRHLDIRQFVCDICGKSFLRKDALRKHLNCTHANLRAFHCKICNKNFKGHLPQHMRTHSKNKPHGCGHCGTRFAQRSQLTVHQRIHSGERPYRCQVCWKAFAHSTALKLHIRRHTGEKPFLCVLCNTGFSQVPHLKKHMLCIHKSNKSYYCEFCKTFFKSKSELQNHEDNKCKKKPKTENESKIKGESIEPPMSLSKMRLLLAVLLKKISTAERLKELRFNKRLIDDILVDSIIHSGRKPCKIEGTSVAEKLKRNIQILLEWTIPEKFMEKFKNEQRSTEELLEELTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -