Opom038421.2
Basic Information
- Insect
- Oxystoma pomonae
- Gene Symbol
- kn_1
- Assembly
- GCA_963921995.1
- Location
- OY998172.1:70436864-70447924[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-125 8.6e-121 405.3 19.2 209 564 110 449 102 456 0.82
Sequence Information
- Coding Sequence
- ATGGATAACGGCTTCGAGACCTGTGCTGTGTACACCGATTTTTCCAAGGCTTTTGACAAGGTACATCACCAAACTCTGATAATTAAACTTGGAAACTTCGGCGTGCGCGGCAACTTTCTTCGGCTTCTGCAGGGCTACGTCACAGATAGGACTCAGTTTGTGGTTGTTAACGGTAGAGGTTGTGAACAAGATGATGAAACGATGGAACAAATTCTCTTCGACTGTCCAGTGCTGTCATCTAACCGAAAGGCTATTTTCGACGAGTTTTGGCCAACATCAGCCAACATACGGGAGGATCCCCTTGGCGACGTTATTAACTACGTTCGAAGCGTCGTTATATCGACTCAGGTGGGCGTAGACGGACCACTGTTAGCAATTTCGGACAACATGTTCGTGCACAACAACTCGAAGCATGGTCGGCGAGCGAAAAGACTGGACCCTACAGAAGGTCAATTCCCAGGACTGTACCCGCCCCTCCCCGTAGCCACGCCCTGTATCAAGGCCATCAGCCCTTCGGAAGGCTGGACGGCCGGCGGATCAACCGTCATAATTGTGGGAGACAATTTTTTCGACGGATTGCAAGTAGTTTTTGGGACCATGCTGGTGTGGAGCGAGCTGATAACGCCGCATGCGATAAGGGTGCAAACCCCTCCCAGACACATACCGGGCGTGGTCGAGGTGACGTTATCCTACAAATCGAAACAGTTCTGTAAAGGGGCGCCTGGTAGATTTGTTTATGTGTCTTTGAATGAGCCCACGATAGACTACGGTTTTCAGAGGCTACAAAAGCTGATACCTCGGCATCCTGGAGATCCAGAAAAGTTACCAAAAgaaATTATTCTGAAACGGGCAGCAGACTTGGCGGAGGCCCTCTACTCGATGCCCCGGAACAACCAGCTGTCGTTGTCCGGTCCCCGGTCGCCGACGATGGGCAACAACGGCATGGGCGCCACGTTCAATGCGTACACCGGACAGTTGGCTGTGAGCGTGCAGGACACAACGAACGGTCAGTGGACGGAAGAAGACTATAATGGTACCACTAGGGCGCAGAGCAGCAGCGTTAGCCCCAGGGGTGGGGGGTACTGCTCGAACGCCTCGACGCCCCACTCTTCGAACGGCGGCGGCTCGTACAACGGCAGTACCCAGATGAACGGCTACGGCGGGTCCACCCCCACCAGCGGTGCCATGCTGCCGGGAAGCCCGAGTGGCGGGGGAATTTTTAACAGTGCATCAAttGGGTCAGACACATATTTCTCAAAAACCTCAACGCACCAATCCGCTTCCGACAAGGAAAAAAGCGCTTTTGCTCCCGTACTAAAGGGCGAAACGCCTCCGCCGCCTAGCTACCCGGCACCCGCACTATTCCACCATCAACCCGTCACCGGGTGGCACCACTTAGCCGTTCAATGTTAG
- Protein Sequence
- MDNGFETCAVYTDFSKAFDKVHHQTLIIKLGNFGVRGNFLRLLQGYVTDRTQFVVVNGRGCEQDDETMEQILFDCPVLSSNRKAIFDEFWPTSANIREDPLGDVINYVRSVVISTQVGVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGQFPGLYPPLPVATPCIKAISPSEGWTAGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSLSGPRSPTMGNNGMGATFNAYTGQLAVSVQDTTNGQWTEEDYNGTTRAQSSSVSPRGGGYCSNASTPHSSNGGGSYNGSTQMNGYGGSTPTSGAMLPGSPSGGGIFNSASIGSDTYFSKTSTHQSASDKEKSAFAPVLKGETPPPPSYPAPALFHHQPVTGWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -