Opom030188.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oxystoma pomonae
Gene Symbol
JARID2
Assembly
GCA_963921995.1
Location
OY998170.1:17465784-17504143[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-22 1.5e-18 68.2 0.0 6 89 1563 1643 1558 1643 0.92

Sequence Information

Coding Sequence
ATGAAACGTAAACGCAGGGAGGTCCCTTCTCCACTTTTGCTGGATGATGTTCCAAAAAGACCCAAAGTGCAAGCACAAAGaaaatttgcacaaaattcCAATGTCAACAGTCCAGCAATCACACCCATACGGGACCTAGAAGCCGCGAATCTTCTACCCAGTACCAGCGTATTACCAGATCCAGTAGAGCTCCTACCCATGAAAAGGCCAAACACTGAAGATTTCCTAACGTTTTTGTGTTTTCGTGGAACTCCGATTTTACCGCCCAGTCTTAACTTTTTCAACACAGCATCCATTGTCACCGATGGACAAGTTCACGAAATCAAGGGCAATACTTCTCCCAAAAATGGACCCATTGACATAGCAAAATGTGCAGGGACCTCTGCCGAAAAGCCTTTTATCGCGTTTGGTGTTAGGAAACGTGCCGATCCGATTGTTATAAGCAAGCAAATGGAAAGAAAAAGGAGGCATGCCTTGGCTTTGCAAACTCTTCGAAGAAGATACCAAGAGCAAAAAATGGCCAAAATTCGAGCTTTAACTATAAGCAAACTAAGTGAGAAAACCACCAACAAAACCACGGTTAAAACCAATACAATTCAAAAAACAGAAACTGTTACTAAAAAAGACAATATTACCTTGCAAAAAACCAAAGTTATTGCAACTAAACATGTTAAGGTTACTACGCAAACTTTGAAAACTGCTTTAAGACCCAAGATCAAACCAAAGATGTGTCTAAGAAGTTTTGGAGGTAGATTTGTGCAAAAAGAGTTACCGTTTCGTAAACGACAAAGAATTGTCGAGGATAGcaaacaacaagaaaataacaaaaaaaagatcCCGAATAGAAAAACAtttgaaagaaaagaaaaacaaaaaagtgaagtaGCGAAGAAGATAATTAAAAGTCTAAAATACACAGATAAAAAGAACAAAACTGGAAATGTGAGAGTTACAAGATCTGGAATTGTGCAGCCCAAGGCCACCCCCAATATCACAAGACAACAAATGAAAAAGAGGATTTTGCTATCGACAACAAACACTCTAAAACCAATTGTCAAATCAAAATTAAGATCATCAACTCTTAAAAGTACTGTCATATCTCAAAAGAAGGGTAGACAAGGATTAAGGATAAGAAGATCACCTCAGGTTGAAAAGGTTAAAGAGAGATTAGAACGCCCTATAGAACCGAAAAGATCCTCAGGAAGAGGCTCTAataatattaccaaaaaatcttTCTCCAAAGATGATAAAGGAGTTGAAGTGCTAGATAAAACTAGCAAAAagcCGAAACCAgagaaaatatgtaaaaaagagaATAATAAAAAACCAGAAAGAAACACTGCCCTCTTGGCAGGAAATGAACAGATCAAAAAGACGGATATTGACATTTTGTGTGACAAAGTACAAAATATAACTGCAACAGATGAAGAGGTATCCATAGGAGATACAATAAACAGTagttcagaaaaaaaatcaggtaattTTAAATCCAAAGAGAAaatagattttgaaaaaaaggcaGAGAAAAATCTGAAGTTAGATGTTAAAGACAATATGAGCAACATAGAAATTTCAAATGAAATTCAGTTATACACATCAGAAAATAAAGACAGGGAAGCTAATATTATTAAGGATAATAAAACTAAAGTAGTGGAAAAAAAGACTACACTTTCAGCGAACACAGAAAAACAATTAAGTGCAACAGACAGGGAAGCTAATATTATTAAGGGTGATAAAACTAAGGTAGTGGAAAAAAAGACTGAACTTTCAGCAAACACAGAAAAATATTTGAGTGCATCAGACGTACAAGAAATTGTGCCTTCCATATCAcaagaaatagaagataaaTCCGAAGGAAATACAACTATAGTCGATAAAACTAAGGGATCAAAAGAGCTTCTGCCTGTCATATCACATGAAATAGATGATAAATCCAAGGGAACAACAATGATAGTCGATTTACCTGAAAAGATCGTTCCAAAAGAAGTTCTGCCTTTCATATCAcaagaaatagaagataaaTCAAAGGGAAAAACAAATATAGTCGATAAACCTAAGAAGATGGTAATGGAAATTCTGTCTCCCATATCAcaagaaatagaagataaatcaaaggagaaaacaattatagtcgataaacctaaaaaaaatttaccaaaagaaagtttgaaagaaatagaagataAATCCACGGAAAAAACTATTATAGTTGATAAACCTAAAAAGATGGTACTCCCAAAAAAGCCAAAATTGCCAATGAATGCTTCAGTTCGAAAGAAAGagttgaaaaaacaaataactgaAGAAtctactcaaaaaatatcacAAAGGCCAAGTAGAAAAACTAAAGAGGCGGCTGCAATTTATATGGAAATTCTAAGTCATAAACTGGTTAATGATGAAATATTTGATGATGATAACAATTCGATTGATAGTTTTCCAGAGTTGCCAAATGCAAGAAAAACTGAACAGAGAGAAAATGAGTTAAAAGCCCAAGCAAAAACTACTTGCATCCAGGAAAAGTTAAATGAGCAACTTAAAACCGAAGACACACTTGTAAGTATTGATAAGAAAGatgacaaatttaaacaaacCAGTGGAGAAGGTTCAAAAGTGCAAGAGAATGTGGCAAAAGAAGCCTTTGTGCAAACGCCAAAACAGGATGCAAACTGTGGTAAAGACGAAactagaaaagaaacaaaaagatCGAAAATTATTTGTGACATAAAAAATGAATCTAAACTGGAACTCATAAGCTATGAAGAACTAAATAAGTGCAATGTTAAGAAGtttccagaaaaaaaagaaaatattaaaaaacaaaatgagaaGGACTCATCTccagaacaaaagaaaaattttgaaaaacataaaGATGAAAAGCTCTTGGAACAAAAGAAAAccattgaaaagcaaaataaagaATGCAAACCCTTAGAAAAGAAGAAAAgtattgaaaaatataataaagaagTCAACGTTGTAATAATGAATACTGATAAATCAAGTCCAGAACATAAAGAAGAGGGCACGAAATTTGGTTTGCGCAAAAGAAAATCGTACCAAGAAACGTTTATAGATTTTGATTCTGAGTCAGATGATGAAATTTTACAAGAGAAGATTAAAAAACttacaatgaaaaaattaaacaaaaaagaaccaaccgaagtttttgagaaaagaCAAACTAGGGGACTGACTCAAATATTTGTGGAATCCACTGATACAGATGAATCATTTTATGCAGAAATTAGAGTACCACGTAATAAGAAACTCACAAGAAGTAAAGGTAAAATACCTGTATCAGAAAATATCGAAAAAGAGAAATTAGGAAGTGAAACTGCAAAGGATAAAACAAttgataaaaaagaaaaaccagTAAAATGTGACTCAGATGAGTCAATAGAATCtaacacaaatttaaaaagtttacaattaaaacaaagtaaaaaaattctatCAAAGTCTCAaggtaaatcaaaaaaatcttcagCTAATTTTAGTGATTCAGATGAAGAACCCCTTTCAAAATTAACTGCTGATAAAAGCGTAAAATCTTGTGAGGAAAGTGAAGAatgtaaaaacaagaaaattaagaaGAAGTCTTCTTTATTATCAACCAGAGACACTAAACCAAAAAGAGAATGTGCTAAGAGACCTCAAAATTACCTTCCTATGCCGTCTTCTTCTGAAGACGAAGAATATTTCCATGGCTTTACTACTATCCCTgtaaaagaagaaatcaagcAACCTATTGCTTATGTGGTGGAAACCTTACCTCCATCTTTAGATCTTCTAGAAAAAGATCTTGGTAGGAAAGGAAAAGTTAACATGTCCAATGAACAAATTGAACAATGGCTCAAAGATTCGGCTCTTGCTGGTAGCGGCGTAGCCAAGGAAAACGATGAGATGTTAAAATTTGGTGAAAAGATACCTGTGGAAAGAGGTATTTCGATTCAGGAAGAAATTAGTGATAAAGTTGATCATGAAACAGTTCCAAAAGAAGTTAAAATCGAAGACATAGTAAAACCTGGTTCAAGTATTACAACTGATATTGGCAAACCTACCAAAAGCGAAACTAAATCATCACCAGGCGACAgaaaattaatctttaaaaaagaaagaaaagaccTCACACCGACTATTAGCGCATTTTCACCTGAAAACGAGCGTAGTGTCTATGCTTTCGGAGACGACGTTGAGGAGACTGTAAGCACTCCGTTTAGGAGACCTTCAAGAAGACCATCGAGTACTGCTACTTCTAGATCAGAAGACGAGTCGTCCAAACATGAAGAATCATTAAAACCAGgcaAGTACAAGGTTCCCAGTTCACCAAGTGCCAGTAGTAGCAGCAGTGCAAAATTGTCCAAAAAGTCAATTCCCAAACCCAGAAATAGAGCAGCCGAAGTCGTTACTCCCATCTACGTGTCGGATTTCCCGAAGGCTTCCGAGCCAGGAAAATTGGTGGAGGCGCCAGTTTTTCATCCCACAGAGCAAGAGTTTCAAGATCCCTTAGAGTACATAGAAAGAATAAGGCACAAAGCTGAGCAGTTTGGTATTTGTAAAATCGTACCTCCCAGCAGTTTCAAGCCTGAGTGCAAGGTTAGCGACGAAATGAGATTCACCGCTTACAACCAATACGTTCACAAGATGTTGCATCGATGGGGACccaattttaaagagtttatgGCGATAAAGAAGTACCTGGCTACTCAGAATATCACTTTAAAACAGCCTCCTTGGATTGGGGGAATGGAGATCGACCTTCCAAGATTGTATCAAACAGTGCAAAGCTTAGGCGGACTAAAAGAAGTGATAGAAAAGAAAAAGTGGCCCAAAGTATCGGACTGTatgaaaattccaaaatctgcaCAGGACAGAGTAACAAAACTTGACGATATTTATTGCAAATATCTTTTGCCATATGACACCTTGTCGCCTGCGGAACGGGAAAAACTATTCGACGAAGTCGAAACCGACTGGGCCAAGAGAGAATCGAAAAGTTTGCTGAAAACAGACgagaaaaatcttgaaaatttCGACGAAGAAGAAGAATCCGACGTCGAAGTGGACGAGTGCATAGTGAAAGGCAGAAACATGGCTCTGAGCGCGTTTTACAGAATCGCGAGGAACACCATGGCCATGCATTTTAAGACTGCCGAGCCCACAGCTCAAGAGGTTGAAGAGGAATTTTGGAAATACGTGACCCAaaagcaaaattatatttgtgtcCATTCGGCATCGATCGACTGTGGAATATGGGGCTACGGATTCGCCGTGACCAAAAACAGTCCGTTTGGAAAACACGCCTGGAATCTCAAAGTTTTATCGAACAATAATCATTCGGTATTGAAATCTTTGGGACCTGCCATGGGTGTTACCGTGCCAACCCTGCACGTCGGAATGGTATTCAGTGCCTGCTGCTGGTACCGCGACCCGCACGGTCTGCCGTGGATCGAGTACCTTCACACGGGAGGCAACAAAATATGGTACGGGGTACCGAACGCCACCTGCGACCAGTTTCACGCCGCCTTAAAAAAGTTGGTTCCGAATTATTGTCGCGATAAGGAACTTTGGTTGCCGTCGGATACCGCTATGGTACCGCCTGGCCTTTTGATGGAGAACAATGTGTCATTGTCAAGgagtGTTCAAGAGCCTGGCCAATTCATAGTAGTTTTTCCAAAAGTATTCACTTCGAGCATCAGTACGGGCTACGTAGTGTCGGAAAGTGTGTACTTTGCGCCACACTATTGGTTAAAATCGGCAAAAAGCATATTTAACGAACTTAAGAGCAGTTGCGAACCTTCGATGTTCTCGTTGGATAAACTGCTTTTGAAGATCGCAGCCGATCCCAAATCTAACATGGAAGTGTTGAGGATTGTTACTCCCTACATTCACGAGTTGTATTCACAAGAAAAAGATTTGCGAAGTAGATTGCACAGTTTGGGGAAGATCGCAGAGGAAAAAATTAGCTCGACCGAGGCGATTGGCAAAAAAAGGAAGAAGCTTCAATTTGGCAATGAGGTCGAATTTGAATGCGAAATTTGCAGGACAAATCTGTATGTTTCTATGGTTATCGAATCTCAAAACGACATGGTTTACTGTTTAGAACATGCGATAGAATTAGCCCAAAAAGAACCGAAAGTAATCGACTTTCTAAAACTACAGTACAACTACAGCGAAAAGGAGCTCGAAGAAATTACCTTCAAGGTCGCTACGGCCATCGAAGTCAAGATGCAGAAAAAAACACCAAACAAATACGGGATGCCAATATTTCTGACCAAATAA
Protein Sequence
MKRKRREVPSPLLLDDVPKRPKVQAQRKFAQNSNVNSPAITPIRDLEAANLLPSTSVLPDPVELLPMKRPNTEDFLTFLCFRGTPILPPSLNFFNTASIVTDGQVHEIKGNTSPKNGPIDIAKCAGTSAEKPFIAFGVRKRADPIVISKQMERKRRHALALQTLRRRYQEQKMAKIRALTISKLSEKTTNKTTVKTNTIQKTETVTKKDNITLQKTKVIATKHVKVTTQTLKTALRPKIKPKMCLRSFGGRFVQKELPFRKRQRIVEDSKQQENNKKKIPNRKTFERKEKQKSEVAKKIIKSLKYTDKKNKTGNVRVTRSGIVQPKATPNITRQQMKKRILLSTTNTLKPIVKSKLRSSTLKSTVISQKKGRQGLRIRRSPQVEKVKERLERPIEPKRSSGRGSNNITKKSFSKDDKGVEVLDKTSKKPKPEKICKKENNKKPERNTALLAGNEQIKKTDIDILCDKVQNITATDEEVSIGDTINSSSEKKSGNFKSKEKIDFEKKAEKNLKLDVKDNMSNIEISNEIQLYTSENKDREANIIKDNKTKVVEKKTTLSANTEKQLSATDREANIIKGDKTKVVEKKTELSANTEKYLSASDVQEIVPSISQEIEDKSEGNTTIVDKTKGSKELLPVISHEIDDKSKGTTMIVDLPEKIVPKEVLPFISQEIEDKSKGKTNIVDKPKKMVMEILSPISQEIEDKSKEKTIIVDKPKKNLPKESLKEIEDKSTEKTIIVDKPKKMVLPKKPKLPMNASVRKKELKKQITEESTQKISQRPSRKTKEAAAIYMEILSHKLVNDEIFDDDNNSIDSFPELPNARKTEQRENELKAQAKTTCIQEKLNEQLKTEDTLVSIDKKDDKFKQTSGEGSKVQENVAKEAFVQTPKQDANCGKDETRKETKRSKIICDIKNESKLELISYEELNKCNVKKFPEKKENIKKQNEKDSSPEQKKNFEKHKDEKLLEQKKTIEKQNKECKPLEKKKSIEKYNKEVNVVIMNTDKSSPEHKEEGTKFGLRKRKSYQETFIDFDSESDDEILQEKIKKLTMKKLNKKEPTEVFEKRQTRGLTQIFVESTDTDESFYAEIRVPRNKKLTRSKGKIPVSENIEKEKLGSETAKDKTIDKKEKPVKCDSDESIESNTNLKSLQLKQSKKILSKSQGKSKKSSANFSDSDEEPLSKLTADKSVKSCEESEECKNKKIKKKSSLLSTRDTKPKRECAKRPQNYLPMPSSSEDEEYFHGFTTIPVKEEIKQPIAYVVETLPPSLDLLEKDLGRKGKVNMSNEQIEQWLKDSALAGSGVAKENDEMLKFGEKIPVERGISIQEEISDKVDHETVPKEVKIEDIVKPGSSITTDIGKPTKSETKSSPGDRKLIFKKERKDLTPTISAFSPENERSVYAFGDDVEETVSTPFRRPSRRPSSTATSRSEDESSKHEESLKPGKYKVPSSPSASSSSSAKLSKKSIPKPRNRAAEVVTPIYVSDFPKASEPGKLVEAPVFHPTEQEFQDPLEYIERIRHKAEQFGICKIVPPSSFKPECKVSDEMRFTAYNQYVHKMLHRWGPNFKEFMAIKKYLATQNITLKQPPWIGGMEIDLPRLYQTVQSLGGLKEVIEKKKWPKVSDCMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPAEREKLFDEVETDWAKRESKSLLKTDEKNLENFDEEEESDVEVDECIVKGRNMALSAFYRIARNTMAMHFKTAEPTAQEVEEEFWKYVTQKQNYICVHSASIDCGIWGYGFAVTKNSPFGKHAWNLKVLSNNNHSVLKSLGPAMGVTVPTLHVGMVFSACCWYRDPHGLPWIEYLHTGGNKIWYGVPNATCDQFHAALKKLVPNYCRDKELWLPSDTAMVPPGLLMENNVSLSRSVQEPGQFIVVFPKVFTSSISTGYVVSESVYFAPHYWLKSAKSIFNELKSSCEPSMFSLDKLLLKIAADPKSNMEVLRIVTPYIHELYSQEKDLRSRLHSLGKIAEEKISSTEAIGKKRKKLQFGNEVEFECEICRTNLYVSMVIESQNDMVYCLEHAIELAQKEPKVIDFLKLQYNYSEKELEEITFKVATAIEVKMQKKTPNKYGMPIFLTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-