Opom014332.1
Basic Information
- Insect
- Oxystoma pomonae
- Gene Symbol
- RTase
- Assembly
- GCA_963921995.1
- Location
- OY998165.1:122683691-122723851[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-23 1.6e-19 71.4 0.1 2 89 434 519 433 519 0.93
Sequence Information
- Coding Sequence
- ATGATCCCCAAACCTGGCAAAGACCACGTTTTTCCACAAAACTACCGACCTATATCATTACTTAGCAACATAGCCAAGATTGCTGAACTCGTAATCCTATCCCGCATCACATCCTTTTCAGATCAACTAAACATCATCCCCGACGACCAGTTCGGATTTAGACCTGACCAGAGTACGGAGCTCCAGCTACTGCGGCTGACAGAATCTATAACCAAAGGATTCTGTCAGAGGCAGGCCACTGGAGTTTTGCTATTCGATGTCGAAAAAGCTTTCGACAAAGTCTGGCAAAAGGGACTGGTCTACAAGATGACTGTCGCCGGGTACCCATTGACAATCACTCGCCTCACAGACTCATATCTACGCGGCCGTAAAATAAACAGCCGCGTGGGGAACAGTCTATCCGCATCTCGGAATATCATGGCTGGCGTACCCCAGGGGGCCGTGCTATCCCCCCATCTGTTCAACATTTTTACCCATGACCTCACTCCCACACCTCACACAGACCTAGCACGATACGCCGACGACCTAATCATTAAAACAGCTTCACTGCTTCCTCGCCAAGTGACGCGTCACCTTCAAACAGCAGCAGACGACTTTGTAGACTACTGCAATaaatggaaaatcaaaataaactccGATAAAACAAAAGCCATCTTATTTAGCCGTAGACGACAGGGACCTGTCGGACACGCCGAAATAAATGGCAATATAATCAATTGGCAGGACGACGTTAAGTATCTTGGGGTTACTTTCGACAAGCGCCTTACTTGGGGGTTACACGTCAAAAACACACGCATTAAAGCCATGTACACCTACAAAAATCTATACTCCCTACTTCGCGaaaatatctCCTCCAATTCTTGCGAACCGAACTTAATCATTCTAAGTTTTCCCAAATACTGCCGCTTTCGAGCTGTCATGAAACGTCTTGAAGGAGTTGAAGACcaatacctaaagttaaagaTTGTTAACGCGTTGGGTGGATTTTACGTCAAATATCCCAACACCAGGatactCTTTTGCAAAGAGACTTTCGAGTACCCAGATATAGAAGGACATGAACTTTTATGCAACCATCTGGCTCCAAAATTGAAGGGAAGACCTAGGGGAAGACGAAAAAAGAATAGGAGTATGTCTCCTGGATCTGAGAGCAACGAGTCCGAGTCTTCGGTTACTATCAACAACTTGGGCGGTTCTGCCAATATTAGACCAATCAGAgttttggaTAAGCTAATTGACAAACGTTCCGATTCACCGAAGGGCACTCGAAGAAGCACGAGAACcattgaaaataatgaaaacaagAAGTTTATGAAAACGTTGACTGCCTACATGAAAACCAAACAACTTCCGATGGGCAGGGTGCCCTCATTAGGATATAAGGAATtaAATTTACACGAGTTCTTCTCAAAGGTGCAAAAATTAGGTGGCTACGACAGTGTGACAAAAAACCGATTGTGGAAGAGTGTTTTCGAGGACATCTCTGGATTGGCTAACAGTACGAGTGCCGCTACCATTGTTAGAAGACACTATGAAAGATTTTTACTTTCGTATGAGCGCCATCTGAAGGGCGAGGACCACAAACCTCTTCCGGTGTCGGAAAGGAAAAGACTGAAGAAAgaattgaaaagaaaaagaggaaaatcGGCTACGGCTAACAAGAAGACTAATAATGGAAATAACAATGGCGATAATGACACATTTGGCGATATCAAGACTCTGTTTTCGCCAAGGAAGCATCATACGGTTCCAATCGGTAACGAAAACaagcaCCAACACCACCCTGCAAAACCCACCTCTCTAAGGCACATCAGAGTGAAACCAGAGcgacaaaaagacaaacaaCTGATTAGACAACTGAGCAACACCgatttggaaaaagaaaaatccaataTGATTAACAACGGTGATGTAAAAAGTGAATCACCTATTTTAAAACTGGAAGAAATCGTTAAAAGTGAAATGAAAGATGAACCGAAAACACCCATCATCGAGACTCCCAGTCCCAAAGTTGGAGAAAACGAAGCTCAAAGTCCGAATGCACAAGAAACAATTGCGAAAAATGAAGAAGAAAAACAGGAAGTAACTCTTTATGTCGCTCCACCTAAAAACGAACCCGAAATTCCACCCAAAATTGAGTCTATAGAGAAAGATTCAGAACCTGTCACGACAGCGGTTGCACCAGTCGTGCAGATACCAGAAAAAAGCACCTCTCCAGTCGAAggcaaagaaaatatctctgTGGAAAAAACAGATGAAGCTTCCTTACCAGAAGACTCTATACCGGAAGCTGATGGTAATAATCGACAAGAAGTTAATATACCTAAAGCTAACTCGCCAGATTTACAAATAGCAAAAGTAGATTCAAGCCTGAACAAAAACGAATTTAGAACAGTTAAGCTGGATATACTTCGAGATCAAGGCCTAGAAGTCACACCGATCAAAGCAGCTTTGGCCGGCGTTGCGATACCAAAAGAAATAAGACCATCCGTCATCCAAAATTCCACGGCAAAAAATCTGATGCCTCCGCCTGGCTTGCCCAAGAAAATCACCGTTTCCATAACTCCCGCCACTCCAATCAAATCTGTAAACAGTACCGCGAAATCTCCAACCACTCCTGCCAAAGACTTCAAATTTATGAACGGCGGAACGCCGCCGAAAGTGGTGCAATCCAAGTCGATCTACACGACCGACAAACAAACGTGGTACGGGAATCCCAAAGAGATATTTCATCACGTGACGACGCCGAGGTTCCCAGCTCCCGTGGCAACCAGACTGAGCGGGGGTAACCCTACTGCCATCGACTTGAGCGTCACAAGTCCCGTCAAGCCCGTGTTAGAGATAAGTCCGGTCCCTCAAAGTTCAAACTCGAGCCAATCGCTGCCTAGTCGAATTAGTGTCGCCAAGAATCTTTACAAGAACGACACGAACGCGATTTTGGAAGGCAGACGGTTGGGTTCGAATTTGGAAATAACCCTGGTCGGTCCTAAAAGTTCGCAGACGGAAAAACCTGCTTCACACTCCCAGAAAAGATCTTCGAGTGAATCTTATGCGCACAAAATCGCTAGGTTAAAAATGAGTGAAGCTACTTCAGTGCATCCTGAAAGATACAGTGTTCCGTCTTTGCCAAGAAGGACTGATTTGAGTATAACCGGCGGCTCGGGAAGTGGTAGACATTCGAATTCGGGTAGTTCGCGAAGTGACGTTAGATTCAAGCCTCCGGCACataatagtaatagtaaatCTAGTAGGTCTCGGGAGTCCGGCCAACCTTCTGCTGGTATACCTCCTTTTCCCGAAGGTGCTAGCAATGGTGCTATGGCGGGTGTTCCAGGTGGTATGTCCCTAATGCAACCGGGCCTCGGGTTAGATAGTATCTACGCTTATCAAGCTGCCATGCACAGTTTGTACTCAAGCCTGCCGAACATGTCGAACATGCCAAATTTGCCCCCTTCGGTGTTGCCCATCCCCACTCCCGAACAACTGAAATTTTACGCCGAGTTGATGGCCCATAATAGGATGGGTTTTAATCCGTTTCTATCCCAGAATGGGGTTAATAACGGCGCTGGGCAGAATTCCTAG
- Protein Sequence
- MIPKPGKDHVFPQNYRPISLLSNIAKIAELVILSRITSFSDQLNIIPDDQFGFRPDQSTELQLLRLTESITKGFCQRQATGVLLFDVEKAFDKVWQKGLVYKMTVAGYPLTITRLTDSYLRGRKINSRVGNSLSASRNIMAGVPQGAVLSPHLFNIFTHDLTPTPHTDLARYADDLIIKTASLLPRQVTRHLQTAADDFVDYCNKWKIKINSDKTKAILFSRRRQGPVGHAEINGNIINWQDDVKYLGVTFDKRLTWGLHVKNTRIKAMYTYKNLYSLLRENISSNSCEPNLIILSFPKYCRFRAVMKRLEGVEDQYLKLKIVNALGGFYVKYPNTRILFCKETFEYPDIEGHELLCNHLAPKLKGRPRGRRKKNRSMSPGSESNESESSVTINNLGGSANIRPIRVLDKLIDKRSDSPKGTRRSTRTIENNENKKFMKTLTAYMKTKQLPMGRVPSLGYKELNLHEFFSKVQKLGGYDSVTKNRLWKSVFEDISGLANSTSAATIVRRHYERFLLSYERHLKGEDHKPLPVSERKRLKKELKRKRGKSATANKKTNNGNNNGDNDTFGDIKTLFSPRKHHTVPIGNENKHQHHPAKPTSLRHIRVKPERQKDKQLIRQLSNTDLEKEKSNMINNGDVKSESPILKLEEIVKSEMKDEPKTPIIETPSPKVGENEAQSPNAQETIAKNEEEKQEVTLYVAPPKNEPEIPPKIESIEKDSEPVTTAVAPVVQIPEKSTSPVEGKENISVEKTDEASLPEDSIPEADGNNRQEVNIPKANSPDLQIAKVDSSLNKNEFRTVKLDILRDQGLEVTPIKAALAGVAIPKEIRPSVIQNSTAKNLMPPPGLPKKITVSITPATPIKSVNSTAKSPTTPAKDFKFMNGGTPPKVVQSKSIYTTDKQTWYGNPKEIFHHVTTPRFPAPVATRLSGGNPTAIDLSVTSPVKPVLEISPVPQSSNSSQSLPSRISVAKNLYKNDTNAILEGRRLGSNLEITLVGPKSSQTEKPASHSQKRSSSESYAHKIARLKMSEATSVHPERYSVPSLPRRTDLSITGGSGSGRHSNSGSSRSDVRFKPPAHNSNSKSSRSRESGQPSAGIPPFPEGASNGAMAGVPGGMSLMQPGLGLDSIYAYQAAMHSLYSSLPNMSNMPNLPPSVLPIPTPEQLKFYAELMAHNRMGFNPFLSQNGVNNGAGQNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -