Opom038813.1
Basic Information
- Insect
- Oxystoma pomonae
- Gene Symbol
- Kdm5
- Assembly
- GCA_963921995.1
- Location
- OY998173.1:9274326-9276729[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-25 6.7e-21 75.7 0.1 2 89 117 200 116 200 0.94
Sequence Information
- Coding Sequence
- ATGATGTCCAAAGAGAAACAGGTTAATGGGAATAATAATGGGATAAAAAGTAATCCAGGAAGCTCAAAGAATTCACCAGTAAAAAGTGCAGAAACTTACAATCATGTGAAAGAAGAACCATTTCAATTTCTGGTGCCACCAGAAGCTCCAGTTTTTTATCCAACTGAAGAAGAATTTTTGGATCCCTTGGCATACATTGCAAAAATCAGACCCATAGCTGAAAATACAGGAATATGTAAAATTAAACCCCCAAGTagatgGCAACCTCCATTTGCAGTAGATGTagataagttaaaatttactcCCAGAATACAAAGGCTAAATGAACTTGAGGCAAAAACTCGGGTTAAGCTTAATTTTCTTGACCAGATAGCTAAATTTTGGGAACTTCAGGGGTCGTCCCTGAAAATTCCCATGGTAGAGAGGAGAGTGCTAGATTTATATACATTACATAGAGTTGTCCAAGTAGAAGGTGGATTTGACGATGttacaaaaaacagaaaatggACAAAAGTATCTGTTAGAATGGGTTATCAAATAGGAAAAAATGTGGGCACAATACTGAAGCAACATTATGAAAGATTGCTTTTTCCATTTGATGTTTTTAAGGAAggcaaaaaaggagtagaagatattaaACTTGAGCCCTCTGAAAATGAAGGAGAAAAAACTGACAAAGACTATAAGCCACATGGTATTATAGGTAGGATGGCTATAAAACCACCATCAGACAAAAATGCTAGAAGGTCAAAAAGGTTTGTAAATAATAGTGACAATGAAAAGACTGAGCTAGACCTTAAGATTaaggaagaaaaagatgatACAATTAAGAGTGAAAAATGTGAACTTGATGACAAACACAATATTGAACTGAAAAGATTACAATTTTATGGAGCTGGTCCGAAAATGGCAGGATATGatgataaaaaagaaaaacctgAGAGGAAGAAGAACAAATGTGAATTTGATCCActtGCAAAATATGTTTGTCGTAACTGTGATAGAGGAGATTCAGAGGAGTTTATGCTATTATGTGATGGATGTGATGATAGCTACCATACATTCTGTCTTATGCCACCTTTGACAGAAATCCCTAAAGGTGACTGGAGATGTCCTAAATGTGTTGCAGAAGAAGTGTCAAAACCCACTGAAGCCTTTGGCTTTGAACAAGCTCAAAGGGAATATACTTTACATCAGTTTGGAGAAATGGCTGATCAGTTTAAATCTGATTACTTTAATATGCCTGTACATATGGTCCCAACAACAACAGTAGaaagagaattttggcgcataGTTTCCTCAATTGATGAAGATGTCACAGTAGAATATGGAGCTGATTTGCACACAATGGATCATGGATCTGGTTTTCCAACCAAGTCTTCTTCAAACCTGCTTCAGGGTGACAAAGAATATGCTGAATCAAGCTGGAATTTAAACAATTTGCCTGTTCTAGAAGGATCAGTTTTGGGATATATCAATGCTGATATTTCAGGAATGAAGGTATTTATTTGGGTtttactttga
- Protein Sequence
- MMSKEKQVNGNNNGIKSNPGSSKNSPVKSAETYNHVKEEPFQFLVPPEAPVFYPTEEEFLDPLAYIAKIRPIAENTGICKIKPPSRWQPPFAVDVDKLKFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRVLDLYTLHRVVQVEGGFDDVTKNRKWTKVSVRMGYQIGKNVGTILKQHYERLLFPFDVFKEGKKGVEDIKLEPSENEGEKTDKDYKPHGIIGRMAIKPPSDKNARRSKRFVNNSDNEKTELDLKIKEEKDDTIKSEKCELDDKHNIELKRLQFYGAGPKMAGYDDKKEKPERKKNKCEFDPLAKYVCRNCDRGDSEEFMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPTEAFGFEQAQREYTLHQFGEMADQFKSDYFNMPVHMVPTTTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSSNLLQGDKEYAESSWNLNNLPVLEGSVLGYINADISGMKVFIWVLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01106971;
- 90% Identity
- -
- 80% Identity
- -