Basic Information

Insect: Oxycera nigricornis
Gene Symbol: ZFX
Assembly: GCA_963942545.1
Location: OZ012663.1:100546191-100551379[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00052 0.1 14.7 0.9 1 23 98 120 98 120 0.98

2 10 0.00018 0.035 16.1 0.5 1 23 126 149 126 149 0.94

3 10 2e-05 0.004 19.1 0.8 1 23 155 177 155 177 0.97

4 10 0.00079 0.16 14.1 1.9 1 20 183 202 183 205 0.95

5 10 1.9e-06 0.00037 22.3 0.4 1 23 211 233 211 233 0.99

6 10 0.21 42 6.4 6.2 1 23 252 272 252 272 0.97

7 10 4.2e-06 0.00083 21.2 5.1 1 23 278 300 278 300 0.98

8 10 0.00013 0.025 16.6 1.3 1 23 306 328 306 328 0.99

9 10 0.0046 0.89 11.7 0.5 1 23 334 360 334 360 0.92

10 10 0.00048 0.094 14.8 0.3 1 21 366 386 366 387 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00052	0.1	14.7	0.9	1	23	98	120	98	120	0.98
2	10	0.00018	0.035	16.1	0.5	1	23	126	149	126	149	0.94
3	10	2e-05	0.004	19.1	0.8	1	23	155	177	155	177	0.97
4	10	0.00079	0.16	14.1	1.9	1	20	183	202	183	205	0.95
5	10	1.9e-06	0.00037	22.3	0.4	1	23	211	233	211	233	0.99
6	10	0.21	42	6.4	6.2	1	23	252	272	252	272	0.97
7	10	4.2e-06	0.00083	21.2	5.1	1	23	278	300	278	300	0.98
8	10	0.00013	0.025	16.6	1.3	1	23	306	328	306	328	0.99
9	10	0.0046	0.89	11.7	0.5	1	23	334	360	334	360	0.92
10	10	0.00048	0.094	14.8	0.3	1	21	366	386	366	387	0.94

Sequence Information

Coding Sequence: ATGCAACGAAAAGCTCGAAAATCCGTTGGtggatcatcatcatcatcccaaTCAATCATAGCGCATTCAATTACAAACGACAGTGGCATTATCCTGTCGGATATCGCTTCCTCTTGCTCGGAGAACGCCAGTGTAAAATCGTTGGAAGCAACAGTTGCAACGTCTGTTGATCGGACAAAATCCACTTTGAAATTGAGAAGTCTCAAACGCGCATCATCGGAAAGGAGTCGTCGTCCACGTGAAATTGTTGGTGGTGGTACGACGCGTGTCCGAAAGAAACCACGCAGACAGTACATGTGCAATGTTTGTAGCAAAAACTTTCTAGGATCGAGCGATTTGCGAAAACATTCGCGCATTCATACGGACGAGCGACCGTTTGCGTGCGAAAAATGTTCGCGACGATTCAGACAGTTGATCAGTTTGAAGAATCATGTGGCTTCGATTCATGGCACGGATCAGAAGTTTGCATGTGAACAGTGCAAAAAGTCGTTTCCGTTGAAAGAACGGTTGAAATTGCATATGCGGATACATTCAGGTGAGAAGCCGTACAGTTGTTCGCAGTGCACGAAGACGTTTGCTCGTGGTGGGACGCTGCGCCAGCACATAATTTGCCATCACGgcacgaaaaaattcaaatgtctcGAATGTCCTACATCGTTCGCTTCGCTCAACAATCTTCGATTGCACATGAAAATCCATTTGAACGTGCTCGAAAAACGATTGCCCATCGTGCCGACGACCAAAGGCAAAGAATTTCACTGTAAAGTTTGCAATAAAACGCTCAAAGGACATTTGTTGCAACACATGAAAAGTCACGAGAACATTCGTTCGCACACTTGCAACATATGCAGTTTGCAATTCTCACAGAAATCCCATTTGAATGTTCATCAAAGGATGCATTCGGGCGAAAGACCGTATCGATGTCGGgTGTGCTGGCAAGCATTCGGTCATTCCAGCGTTCTTCGATTGCACATTCGCAAGCACACGGGCGAGAAACCATTCAAGTGTCTGATTTGCTCCGAAAGAGGAGTGGCATTCTCACAACTTCCACATTTGAAGAATCACATGAAAGTCATCCACGGCAAGGACAAACCGTATATGTGCGAGGCATGCCAGGAGTTTTTCAAAACGAAAAACGAACTGAAAATCCACATGGACTCGGAATGTATCAAGACCAGCCCCGAGGATTCATCATCGCAGACGTCGCAAAACGACGAGGAAGTCGCGTTGTCGCGATTGCGTCTACTAGTCGCGATTCTTATCAAACGCATTTCCACGGAGGAACGTTTGAAGCAGCTCGGCTTCGAGAAGCGTCTCATAGATAATGTGGTTATCAGCGCGTTGAAGCTGGCGAAACGGAAATGCCATGAAACTGGAACGATGAATGAAATCGATCGTTTTCGATTGAATATCGAAGAGTTCCTAGAGTGGACGATTCCGGAAAACTTTATGATCAAGTTTCGCGAAGAGAAgaaatcaattgatgatttgCTGGAGGAGCTGGCGACATCGTTCTCGAAACCAACCACCAGTGGCGGCGTCGTGACAAATGCAATCGAAGACGAGCACTAG
Protein Sequence: MQRKARKSVGGSSSSSQSIIAHSITNDSGIILSDIASSCSENASVKSLEATVATSVDRTKSTLKLRSLKRASSERSRRPREIVGGGTTRVRKKPRRQYMCNVCSKNFLGSSDLRKHSRIHTDERPFACEKCSRRFRQLISLKNHVASIHGTDQKFACEQCKKSFPLKERLKLHMRIHSGEKPYSCSQCTKTFARGGTLRQHIICHHGTKKFKCLECPTSFASLNNLRLHMKIHLNVLEKRLPIVPTTKGKEFHCKVCNKTLKGHLLQHMKSHENIRSHTCNICSLQFSQKSHLNVHQRMHSGERPYRCRVCWQAFGHSSVLRLHIRKHTGEKPFKCLICSERGVAFSQLPHLKNHMKVIHGKDKPYMCEACQEFFKTKNELKIHMDSECIKTSPEDSSSQTSQNDEEVALSRLRLLVAILIKRISTEERLKQLGFEKRLIDNVVISALKLAKRKCHETGTMNEIDRFRLNIEEFLEWTIPENFMIKFREEKKSIDDLLEELATSFSKPTTSGGVVTNAIEDEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -