Onig000837.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oxycera nigricornis
Gene Symbol
-
Assembly
GCA_963942545.1
Location
OZ012659.1:1023659-1034878[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 0.046 9.1 8.5 0.7 2 23 576 598 576 598 0.94
2 27 7.3 1.4e+03 1.6 4.3 3 23 605 626 604 626 0.94
3 27 0.00067 0.13 14.3 2.6 1 23 631 654 631 654 0.92
4 27 0.0016 0.31 13.2 0.9 2 23 661 682 661 682 0.97
5 27 0.0029 0.56 12.3 4.8 1 23 688 710 688 710 0.98
6 27 0.00019 0.038 16.0 0.2 1 23 716 738 716 738 0.95
7 27 0.00015 0.03 16.4 1.4 1 23 754 776 754 776 0.98
8 27 0.00047 0.092 14.8 0.8 2 19 785 802 784 802 0.96
9 27 0.011 2.2 10.5 0.2 1 23 817 839 817 839 0.98
10 27 0.0012 0.23 13.6 2.1 1 23 845 868 845 868 0.95
11 27 4.2e-07 8.2e-05 24.4 0.7 1 23 874 896 874 896 0.98
12 27 0.042 8.3 8.6 0.3 1 23 902 924 902 924 0.95
13 27 0.57 1.1e+02 5.1 0.1 1 15 930 944 930 947 0.81
14 27 1.1 2.2e+02 4.2 0.2 3 18 974 989 972 989 0.92
15 27 6.3e-05 0.012 17.5 0.7 1 23 1143 1165 1143 1165 0.96
16 27 0.0059 1.1 11.3 0.4 1 23 1171 1194 1171 1194 0.95
17 27 0.012 2.3 10.4 1.9 1 23 1199 1221 1199 1221 0.99
18 27 0.00038 0.074 15.1 8.8 1 23 1227 1249 1227 1249 0.99
19 27 2.5e-05 0.005 18.8 0.7 1 23 1255 1277 1255 1277 0.96
20 27 2.4e-05 0.0047 18.9 1.0 1 23 1283 1305 1283 1305 0.98
21 27 2.4e-07 4.8e-05 25.1 0.6 1 23 1311 1333 1311 1333 0.99
22 27 0.00078 0.15 14.1 4.5 1 23 1339 1362 1339 1362 0.95
23 27 0.00055 0.11 14.6 1.1 1 21 1405 1425 1405 1427 0.94
24 27 3.7e-05 0.0072 18.3 1.3 1 23 1433 1456 1433 1456 0.94
25 27 0.0001 0.021 16.8 0.4 1 23 1462 1484 1462 1484 0.97
26 27 0.011 2.2 10.5 5.6 1 23 1490 1512 1490 1512 0.96
27 27 0.021 4.2 9.6 0.1 1 23 1518 1540 1518 1540 0.98

Sequence Information

Coding Sequence
ATGCGATGCTTAGTAGAAGGCTGCTCGTCTATTGGGCCCACCAAGAGCATTGTTTACCATTACATACCGGTCGACCCGCAAAGGCGAGAAAGGTGGCTACAagcaataaataaatcgaaCTCGACAGTACCAAAACACGCAACTGTTTGTTCGTTGCACTTTTCTAGGAACTGTTACGTGGAAGTGGACGGTACACTGAAACTATCACGTTCAGCAGCACCGACGTTGAACCTGGGATTAGCCAAACAAAAAAGCGATCGTAGTGAAGCAAGTACAGGAAAAACTCCGCTCAAAATGCTGATAACCACCTCGAGCATGCCACTGTGCTGCGTGCCGAGTTGTTCGTCCAATTATCGGAGTTCCGGCACGGCAAGATTATTTGATGTTCCCAACGACCCGAATCGAAGGACCAGTTGGAAGAACGCGTTAGGACATGAGCAACCGATGCTTTCTAAGGGATCTCGCATTTGTCACAGGCATTTTGAAAGCCGTTTTATAGTTAAGGGCGGCTCTTATATCGGGCAAGATGGCATTGAACGCCATTATAAACTGAGGAAATGGAGGCTGAGAGAGGACGCTGTGCCCATCCAATCAACAAGTGAAACTTTGCCGACTGAAAAAACTGCTCCAGATGTTCCGCCTGAAAGATGCTTTAAAGTGGAGACAACATGCCGTACGTGTTCCATTCAAATCGGAGATGAAAACGAGGGCACCCCATTATTTAATGGATCGCtgtctttgaaaaaattcagaCCTGACATTTTTCGGGAGTTGGAACAGTTTGGGCTGCAGATTGACGTAGATGATGGCTTACCGCAACAGATATGCCAAAAGTGCCTGCAAAGCTTTTCAATACTGATACAATTCAGAAAACAGTGCCAGCGAGTGCAAACCGATTTGTTAAGGTATTTCAAAGGACGTAAAAACATGCGGAAAAGCATGCCTAGCGACGAGGAAATCATAACGTTGGACGATAATGGCGAAATATCAGAAGTTTTGGATGCTGCAGCAGCAGCTGATTCGATTGCGGAAGCAGCAGCTACTTCGGTTTCGGAAGCACTAGCTTCTTCGATTGTTGCGACGCCGACTTCTTTAGTTGTAGAAAATGCACCGAAAAAGGCTCGAATAGAATGTATCGACGAAGATGTCGGGATGGAAGAACCGCACAATGAGATAGAACAACCGCAAATAGAGGAGGAAGGTGACGTTGAAAATTGGATTTGTGAGTACTACATAGTTTCTGATGATAAAAAAGTCGGGAATGCACCGCAGAATAGCTTGGGGAAAACCGATACAAACGCTGGCATGATTGGGCAACAGAACAAGCAAGAGTTAAGTACAAAATTAGAATATGTCCACGAAGaaaatagcgttgacacattcgATTTTGACGAAACCGAGCTGAACGACGACGATGAGAATAAGGACGCAGAAGCTTGGCAATGTGAATACTTTATCACTGCAAACGGCGAAGAACACGGTGAAGAAAAGGTGCTGAAAGATGAATACAGTCGCCAAAGTCCAATAGACCATACATTGAAGATATGCGATGAGCCAAAAAAGCCTAATCCAGCGCGTAAAAAGGTGCCAAAAAAGCGAAATAAAGCGCGTAAAAGGGCGGTGCAAATGTCGCGTAAGTTGTCGACAGAAAAGTGTCCGTTTTGCAAGAGAACTGTGGCGCGTATCACACAACACGTCCCATCGTGCCCTGAACGGAGCGTTGAAGTGTGCAGCTTTTGCTTTTTGGCATTCAAATCTAAAACGGAACTGGACAGTCATCTGGATAAAATGCACTCTGAAAAGTTGCCGGCATGCCACATATGCTTCTGCACGTTTGAAGATACGCTGAAGCGAAATATCCATATGCGAGATTTCCACAACCAAGAGATATTCAAGTGTACTGTATGCGATATTGTGTTCAAAACGGTGCACACATTGAATAGACACAACGATCGGAAACATTCGCCTGTAGTCAACCGAGAATGTCCGATATGCAAGAAGGTGCTGGACACGGAGTTCCATTACAACTACCACATGGAAACGCACACGAAAGAAAAGCGATATCAATGCAAGTACTGTGGGAAAGGCTTCATGCAGCCGCATCATAAAGACAGTCACGAGCGCAGTCATACGGGCGAAAAGCCGTATTTGTGCGATGGATGTGGAAAGACGTATAAAGATATCAACTTACTCAAAGCTCATCTTGTCAAGCACGATCGGCTAGCATTCCCGACGAAAAGCTATCTGAACGCTGGCACGTTTCCGTGCAAAATATGTGACAAAGTGTTGAAAAAACGCACCACATATTATGCCCATATGCGGAATCATCGACAAAGCGCAAACCCCCAGTTGAAATGCGACAAATGCAATAAACGCTACACAACCAAATATAACCTAGCTATTCATCCTTGCGAACAGTTGAAAGAAAATGGCGAGAAAATTTTCCCTTACAATTGCGCATTTTGTAGAAGTGGATTCGCAACACCGACGGCGCTCGCAAGGCACGTAAAAAAACACCAGGAAAAACGGCAGCATGCGTGCAGTGAATGCGATGCTAGTTTCAAACGAATTGAACATTTGAAGGGCCACGTGAAGCGAATGCATTTGAAATTGAGAAACTACGAGTGCACCGATTGCGGCAGGAAATTCGTGCAGAGATACGAGCTAACTGCTCACAAGAGGGTGCATTCAGACGAAAAACCATACAAATGCAAAGACTGTCCAGCCGCtttcaaatggaaaaacatattaaatatCCACGAACGAACGCACACTGGAGAGAAACCATATCCTTGTGATGTGTGCGGGGCATCATTTAAATTAATGTTCAGCCTGAGAAGTGAGTGGATACGATCAAAAGTAATCGGAGCTCTGCCTAACATAGAGATAACAGAAGATGACGGACTGCCACAGCAGATATGCTTGAAGTGCGAGGAGGCATTTTCCTCGATAAGTCACTTTAAGCGACAATGCTTAGAAGTGCAGGCAAAGTTGGCGGAAGCTGCTTCCCAATTCAACGAAGATGTGGAAGCAGCCACATGTCCAGAACGTTGCATATCATTcgaagtgattatcatcaattCTGAAGAGGAAGAGAAAGCGAGACTAGCGTCTGAAGGTACGGACGAGACTAGCGAAAGCGGCGTGTACTGCTATCAATTATATGAGAGTGATTTAAACGAACTAGACGTTGCTGATGATGGGGACGATGAGAATCGGGGAGTGTTACCAGGAAAAGAGGGCAATGCAGGCGAGCCACTCCGGACGCCGACCCCATCAACTCTAAATGCCAATCGTTCCGCCGATCACTCATATAGTGCAAATGAAGTGGCAGAGTATCAATCCAACGCAGCCAACTCGAATACTTCAACAACTAGCTCCAACTCCGAAGAACACTTGGACCAATGTTTGACCCCGCGCCGATCTTTCGATTGCCCGATTTGCCAGCGCAAATTCAGCAGCGCCTCGAATCGGAACTCGCATCTGCAATTGCACAACAAGAACGATGCATATCCCTGCGACGTGTGCAATCTTCGATTTAAAAGCAAAATGTATGCAGCGAAACACAAGCGAGCTGTGCACGAGACAGGCGAATACGAGTGCCGCGTGTGCAGTCAGAAGTTGAGGAACGCTATTAAGTTTAAATACCACATGCGCTCCCATAACCCGGTGAAGAAATTCAAGTGCACGTATTGCGACCGGTCATTCATGCAGCATCACCACTTGGTGAATCACGAAAGGACGCACACCGGACAGCGACCATTTTTGTGTAATATATGTGGCAATGGTTTCAAGCAGGaaaccaatttaaaaatgcatctGAGGATGCATAGTGGCGAAAGACCGTACTCCTGTACGATTTGTGGCAAAGATTTCATTCAACGCGGAGCATACGTAATGCATATGCGACACCACAACAATATTCGTCCCTATCAATGTGAGGTTTGTGGAAAAAAGTTCATACAAATGTCGACATTGACGGTGCATCTACGCACGCATACCGGCGAACGACCGTACAAATGTAGCTTCTGTGGAAAGGCATTTGCTCAAACCCATCAATTGAAATATCATAAATACTCTTCGCACAATGGAAGCGCAGTCGTCGATAAAACATTACTGGTAGACGTAGAAAAGCAAATGCCTGATGATTCCGACGGAAAGCGCAATAGTTGGCCCGAAGAAAAAGATCAAGGTGGCTTAAACCAGCATCTCTATGTGTGCCCCATATGCTCGAGAGGATTCAAGCTCCCATCGTCGCTCACGTCTCATGTGAAATGCCATTCGGAGGAACGGAAGCACGTTTGCAAGGAGTGTGGGAATACATTCAAACGGGCGGAGCATCTACGCATCCATGTGAATGGTGTGCATTTGAAAAAGAAGCCGTACGCGTGCGATTATTGCGACAAGACATTTTCGCAGATCGGCGACCGAAATATTCACTTGAAAAGTCATACAGTTGATAAACCGCATCATTGTCGATTTTGCAACAAAGGCTTCAAACTACAAAAATCTCTGCGAGCCCATGAACGCATTCATACCGGCGAGAAGCCTTTCACCTGCGAAATTTGCGAATCGGACTTTATATCGTACAACGCGTTGGCGATACACACGATGAAACATTCTGACGAAGAACGGACGACGATTAAGGATAAAACTTTGTTAAGTCTAAAGGAGGCAACGAATCAAAATGGCAGCACGACTTATCCGGTTGTTGAAACAGTTCAGGTAGAACATCAACTAGTAACGGATGCGAAAACTTGTAGGCAAGAAGTTTTCAAAATCCCAACATCGAAAGTGgcaaataaattacaataa
Protein Sequence
MRCLVEGCSSIGPTKSIVYHYIPVDPQRRERWLQAINKSNSTVPKHATVCSLHFSRNCYVEVDGTLKLSRSAAPTLNLGLAKQKSDRSEASTGKTPLKMLITTSSMPLCCVPSCSSNYRSSGTARLFDVPNDPNRRTSWKNALGHEQPMLSKGSRICHRHFESRFIVKGGSYIGQDGIERHYKLRKWRLREDAVPIQSTSETLPTEKTAPDVPPERCFKVETTCRTCSIQIGDENEGTPLFNGSLSLKKFRPDIFRELEQFGLQIDVDDGLPQQICQKCLQSFSILIQFRKQCQRVQTDLLRYFKGRKNMRKSMPSDEEIITLDDNGEISEVLDAAAAADSIAEAAATSVSEALASSIVATPTSLVVENAPKKARIECIDEDVGMEEPHNEIEQPQIEEEGDVENWICEYYIVSDDKKVGNAPQNSLGKTDTNAGMIGQQNKQELSTKLEYVHEENSVDTFDFDETELNDDDENKDAEAWQCEYFITANGEEHGEEKVLKDEYSRQSPIDHTLKICDEPKKPNPARKKVPKKRNKARKRAVQMSRKLSTEKCPFCKRTVARITQHVPSCPERSVEVCSFCFLAFKSKTELDSHLDKMHSEKLPACHICFCTFEDTLKRNIHMRDFHNQEIFKCTVCDIVFKTVHTLNRHNDRKHSPVVNRECPICKKVLDTEFHYNYHMETHTKEKRYQCKYCGKGFMQPHHKDSHERSHTGEKPYLCDGCGKTYKDINLLKAHLVKHDRLAFPTKSYLNAGTFPCKICDKVLKKRTTYYAHMRNHRQSANPQLKCDKCNKRYTTKYNLAIHPCEQLKENGEKIFPYNCAFCRSGFATPTALARHVKKHQEKRQHACSECDASFKRIEHLKGHVKRMHLKLRNYECTDCGRKFVQRYELTAHKRVHSDEKPYKCKDCPAAFKWKNILNIHERTHTGEKPYPCDVCGASFKLMFSLRSEWIRSKVIGALPNIEITEDDGLPQQICLKCEEAFSSISHFKRQCLEVQAKLAEAASQFNEDVEAATCPERCISFEVIIINSEEEEKARLASEGTDETSESGVYCYQLYESDLNELDVADDGDDENRGVLPGKEGNAGEPLRTPTPSTLNANRSADHSYSANEVAEYQSNAANSNTSTTSSNSEEHLDQCLTPRRSFDCPICQRKFSSASNRNSHLQLHNKNDAYPCDVCNLRFKSKMYAAKHKRAVHETGEYECRVCSQKLRNAIKFKYHMRSHNPVKKFKCTYCDRSFMQHHHLVNHERTHTGQRPFLCNICGNGFKQETNLKMHLRMHSGERPYSCTICGKDFIQRGAYVMHMRHHNNIRPYQCEVCGKKFIQMSTLTVHLRTHTGERPYKCSFCGKAFAQTHQLKYHKYSSHNGSAVVDKTLLVDVEKQMPDDSDGKRNSWPEEKDQGGLNQHLYVCPICSRGFKLPSSLTSHVKCHSEERKHVCKECGNTFKRAEHLRIHVNGVHLKKKPYACDYCDKTFSQIGDRNIHLKSHTVDKPHHCRFCNKGFKLQKSLRAHERIHTGEKPFTCEICESDFISYNALAIHTMKHSDEERTTIKDKTLLSLKEATNQNGSTTYPVVETVQVEHQLVTDAKTCRQEVFKIPTSKVANKLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01127453;
90% Identity
iTF_01127453;
80% Identity
iTF_01127453;