Onig043893.1
Basic Information
- Insect
- Oxycera nigricornis
- Gene Symbol
- jarid2b
- Assembly
- GCA_963942545.1
- Location
- OZ012663.1:45220387-45231432[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-22 2.9e-18 67.6 0.0 7 89 1547 1627 1542 1627 0.93
Sequence Information
- Coding Sequence
- ATGAATCATTTGACTCCATTAGAAAATAACCCGGACCTTGCTTCGGAAATAAAAATGTGTCAGCTTGAAGATGTGGACTTCGCAGTACTTGCAGCTATTGGTGAACGTTTTCTAATTGCTCTCTACGGGGGTGATAAATTCGATAAATCTATTGATGCTCTTCACAACATCAATGGCAAAGAACAAATTGAATCTCCCTTCGCTTCCATCTACGCACGATTTAGCTCGATTGCACACTCTAAGGGTGTACCATCAAGTTCAAAGGTGGCTTGGAAGATTCAACGATCCATGTTCCTGGGGTTGGAAAAGAAATTCACGAATGTTTATGCATATGCAAAcACAAAAGTCCAAGCGCAACGAAAATTCGCTCAGGGTCAAGGAAATCCGTCCGCATCATATTCTCTTTCATCATCAATAGCTGCGAGTAGTTCGCAACCAAATACACCGGCAAGAGACAGTAAGGAGCCAATTCCAGAGTTGATTCCACATAAAAAACCAAGTGCTGAAGATTTGGTCACCTATATTTGCTTTCGTGGCACGCCTGCGCTACCGCCGCACCTAGACTTttttaatcaaaacaaaaataatgagAAACACGGGAAGGAGAAAGAAAAGCTAAGTGAAACAGTGTCGAAAAATGATGTGAACAGTAGTGGCAAGGCCACAAGTCGAAAGGCCGAGAAGAGCAATGATAAAAACAATAGAAGCGACAAATGTGATAATGGAACAAAAGCGAACAATGTTGAGAAGGGTGAAAGAAAGGgcgaaaaaatggaaaaacctGAAAGTATAGGATATGCAGTGAGAAAACGAGCAGATCAAGTGGTAGAGGGCAACCGCAAATACAAAAACAACGAGAGAGTCACGAGATTACGGGAGCGAGCGCCGAAAACGCCCGAGATGAATCGAAGGTCGCCGAGAACGAGATCTGCATTGAAAGTGGACAGCGAAGATGAGATTGAGCGGGAAGTGGATGAAGATGAAGACGACGATATTGCTGTCAGTGAAATGTCTGAACCAAAGAAGCCTCCTGTTAAGAAAAGCTTAACGAAAGGAAAACGAAAAACAGGTACTTCGCCAGTTAAAAATGATCAATCGAGTCCTACACCTGAAGTGCTTCCATTGAATGAACCAGAAACTCCGCCTGTCGTAAATATTCGAGCTAAACGAAATGCAACTAAAGCATGCATAACACCAGAAAAAGTCATACCCACAGCAGCAGAAAAGAAGGCAGTAGTGGTATCTGAAAAAAAGGCGACACCCACTCCTGAAAAGAATGAAAAACGAGATGACTCTGTAAGTAAAAAGTCTGATGTTAGCTCGAAAATATCCAGCAGAGGTGGCAAGAAAACCCCCGTTAAACGAAGCTTGAAAGGGAAAACGAAAGCGCAAgtagaaaatgatgaaaatgtaACCGACATTGTTCCGCCGAAGCCAAAGCGAGGCAGAAAAACTGGTGATGCGGACACATCCGCGAAGCCCGCAGAGAAAGTCACTCAACGTTCCCAAAACAACACACCCGAGTGTGAAACGAGATCGAGTCGTCCAATGCGTAAAACGAAAGAAGCTGCAACAATTTACATGGAGTGGATAGGACTCAAATTGAATTTGGACGATGACGGATCCTCCTTGGATAGTTTTCCTGAGCTCCCCAATGCGAAAGAGACTCAAAAAATTGAGAACGAAATGAAGCAGAATTGCTTGAAGCAAAAACTTCCCCAAAAGGAAGTGCCGGcaaagaaggcaaaaacaactaaaaaagTTACCGCTGTTGGCAAGAAAAAGGCAGGCCCTGCGCCAAAAAAGCTTGAAGGAGCGTTGGTCGAACAAGTCAATGAAGCAGTAAGCAAAGAAGATCCAGATAACAAAGAAAAAGTAGAAACCAGGAATGATGAAAAAGCGGAGAAGAATTTTAATGACTCTGACGATGAGCCGCTTGTAGTCCAAAAAGCCGAAGTTGAAACAAAACCCgcttcaacaaaaattaaaggACGGGCTTCAAAAAAGAAGATCAAGTCGCCGCCCAAGTCagtaaataaaaagaaagcGCCTGCTGCCGTGAAGAAAGAGGAGCCTAGCATTAATGACACTCAAGAGCCAGAGAAAACGGAACTCAAATCAGGCATTATTGAAGGCAATGGTGAAAATCGGCCATCTAGCGAAGAAATCGCAATTGAAGACGTCCCAAAGTTAGAAAAAAGCTTCAGTGATTCGGACGATGAACCGTTGGCAACAAAACTAGTAACTAAACCATCAGAAAAGGACATAAAAAACGATCCGGAGCCTCTACAAATTATCACAGAAATCACTCCGGTTACAGTTCCGAAAGTTAGTCCTCCAAAAGAACAGAAAACTAAAATCTCGAATATGTCATTTCCCGCTCAGCATATACCCAAGATAGAGGACAGGCCATTTCTGAGAGGCCCAACGTCCCCAAAGTATCCCGCTAAAGCAGCTCTTCCAGTCGTACCGGCCACTCCGATTCATAGGCCAGATGCTATCGTTGCGTCTACGCCGCTCGCGCAATTGCCTGTCATACCGATGCCAGGACCATTCACTCCACTCATGGagagatttccatctcccaaagTCAATCCCTCGTTCTTAACGCCAAAATATGACCGGAATATGGACAGAAAGCCGCCCGAGTTAGTAACGTCATCATTGCCGAAGAATATTTTAATGTCTTCAAGCGCCTCAAAACTGGATTTTTCTGGTAGCAAACCAGCCTCACCTAACAGCAACGCAACGAACGCAAAAAAGGCTGAACCGGATACTATAGCATCCGCGAATTTAATGCCCAGCAAAGAGGAGTCGGGCAAAATATTTGGAATAGCAAGTGTGAGTTTAGCGCAAAGTTCGGGCCCAGATAATACAAAGTGTACCCTTGGAAAGTGCGGCTCAATTCACAAGCCCGTGCTAGGACCGGTAGTGCCTACAGAAGCATATTTGGGGGAACCTCTTTCAAGCAAAGAACGCCGGAAAGCTAAAGTGAATATGACACATGAACAGATTCAAAAGTGGTTAATAGAATGCTCGTCGAATCCGGATGAGATTCAAGATGATCTAGACGACGACTTCGATGAACCATTGAAGCCAAAAACGTTTGCACCCACACCTCCGCTAATCAGAGACGAGAAAGACTCTGGATCGCTGTCCTCAAAGACAGGCAAGGATGTGCGAAGCGAGAGTACTTGGTCGGGAAAGGGCCCCTCTTTAAAGGCGACTCCAGTAGTTGTAAAAGAGGATTCGAGAGAAAAGCCTAGTTCGTTATTGTCTGCAGAAGTCGCTAAGCAAAACTCCGTGTTCGAAAGCCGCAACTCTCCAAAACCTCAAAAGCTCGCTGAAAATACAGTTAAAGAGAAAGTTTCACCAAGCACCAGCCTGAAAAAGTCGGAATCAGTATCGAAAATCTGTCGTGACAATACGAAATCTCCCAAACCATCGACGTCTTCGGCAACGTCTTCGCCGAAACGAATTAAGAATGCTAAAGCGATTGCACAAATTACTCAAAAGAAGTTGCCTGCCCCGAAGAGGCAGCCAGTGTATAGCACTAAGCCTGGACCGGGCGAAACAAGTAAAAAGAAGCCAATGACAAATAGTTTTTCTGCATTTTCACCCGAAAATGAGACCAGCGTTTATTCGTTTGACAAAGAAGATGATGTTCCTCCGCCTATGGCGAAGCCGTTTAGACGACATAGTCGAAGGGAGTCTAATGCTGATGAAAACACTTCAAGTGAGAAGCCTTGCAAGGCAGAGAAGGCGCCTGTGAAGGATGCACAACAAAACAGTGTATCGGTTATGCTTAGTCCCGAAGAGAGCAGCAAATCGATTAAAGTCAGTTTGGAAAACTCAGAAGCTGCGGCGTTGGCCAAGGCAGAGAAACCTCATGCGGATCCCTCCGGTTTGGGTGACTCGGATTCCGAGGGGCACACATTCTACATACCATTGCAAGGCACTGGGGCAACGACTACCAACTCCGGCAAGTCAGACGTAATCCAAGGGGTTGCTGTGAAACTTGGTCGTGAGGGTCCTGAAGGGCCAAACCAACGGGTGATAATGCACGCTACACTGGTGACGAAAGCACAGATGGGCTCGAACACAACCCCGCTCCCGGAATCAATGAATGTGCACGAGATTGTGAAAAGTTTACTGTCTACCAATAAAGACCTGTCTGCACCAGGCGCCTCAAAGAGTGTTCCTATAGGAACAGTGCAACCTCGATTTAAGTCAAGTGCGGAGGGACAAATTGCAGTAGATGCTGCATTGTCCAGAGTGAACTCGAATTCCTCACTGTTGTCGGGCTCCACTAAGTCGAAACCAACGCCACCAGCTCAAAAGAAGCCTAAAGACACAACTCCTGTAAAAGTGTGCAACAACACAGCATTTCCCCGCCGAGATGATCCCACACAGATGGTGGAAGCGCCAATATTCCGGCCCACAGACAAAGAATTCCAGGACCCAATGGAATTTATTGACAGGATCACTCCGATCGCTGCTCGATTCGGCATTTGTAAGATTATTCCTCCTGACAGCTTCAAGCCAGAATGTCGGGTGTCTGACGACATGCGATTCACAGCCTACAACCAGTACGTGCATAAGATGCTCAACCGATGGGGCCCTAGCGCGAAGGAGTTCAGTGCAATTAAGAAATATCTGGCTACACAAAGTATAGCCATGACACACCCTCCTTGGATTGGCGGGATGGAAGTGGACCTGCCTCGCCTATATCATACGGTGCAAGAGCTTGGCGGTCTCAAAGAGGTCATTGAAAAGAAGAAGTGGGCCAGAGTGGCCGAAGAAATGTGCATTCCGAAACTAGCTCAAGATCGCGTGACGAAGTTGGACGACATCTATTGTAAATACCTGTTGCCATATGACACATTGTCGCCGGCCGAGCGTCAGAAATTGTTTGACGAAGTAGAGGCAGATTGGGCGAAACGCGAGGCCAGAGCTAGGCGAAACGCCGACCGCTGTGTTAATGTAGAGAACATCAGCACCGAAGACGGGGAATCAAGCGAGAATGACGACGAGTCCGACGAAGAAGTCGATGGTGTTTCGATGGAGTGTATAGTGAAGGGGAGAAGCATGCCTCTGAATGCCTTTTTCAGAATAGCGAGGAATACGATGGCGCTGTGGTTCAAGAATACAGAGCCCACTGTGTCCGACATTGAAGCGGAATTCTGGAGGCATGTGGCTGTGAGGGACAGTCACGTGTGTGTGCATTCGGGTTCGATTGATTCGAGTGGCTGGGGTTACGGATTCCCCACCCCAGGGCCGAAAATGAAGGGTTCGCCATGTGCAAAACATCCGTGGAACTTAAAAGTGCTGACAAACAATGCGGGATCAGTACTACGGTCGCTTGGTCCAGTGATGGGCGTAACGGTGCCTACATTGCATGTGGGCATGCTTTTCAGCGCCTGTTGTTGGTACCGTGACCCACATGGCCTTTCGTGGATTGAGTATCTCCACACGGGAGCGAGCAAAATCTGGTACGGAATTCCGGACGAGCAGAGTTCCAAATTCCGCAAAGCTCTAACGGCACTCATTCCGACACATTGCCAAAATAAGACGATTTGGTTACCATGCGACACTGCTATGGTGCCACCACATATGCTGACAGATCGTGGCGTGTCGTTGTGTCGCGTCGAACAAAAACCCGGGGAATATGTGGTGATTTTCCCAAGAGCATACACTTCGAGCATAGCTACAGGATATGTGGTGTCAGAAAGCGTATATTTTGCGACCAGCTCGTGGTTAGACTTGGCGAAAGACGATTTCAAGGACATTCACGAAAGCTGTGAGCCAGCTATGTTCTCGTTGGAGCAACTGTTGTTTGCCGTTGGGAATGACCAGCGAGTTTCGGTGGATATTCTGACCCAAATCGTTCCGATGTTGTCTGAAGTCTACGACAAAGAAGTTGCAGCGAGACAACAGTTGAAGGCAGCAGGGCTGATGCAGACCGAAAAATACCAACAACCCGTTGCGAAGACGAAGCAGAAACCACACGTGCCGGAGGAGCAAGAGTGTGACTTTTGTCGAGCTAATTTGTACATATCAATGGTTAGAACCACGGAAGGGAACATTTATTGTTTGCAACATGCGTTGCGCAATATCAACAATGGTAACATTCAAGCCAAACAATGCACGCTGATCTTCACTTATGACATTGAGGATATCCAGAACTTGATCAAAAAGATTAAAGACCGATTAGTCCAACTGCAAAAGAAGGGCGCGAGCAGCGTTTCGACTGGCAAAAAGTCGAAATAG
- Protein Sequence
- MNHLTPLENNPDLASEIKMCQLEDVDFAVLAAIGERFLIALYGGDKFDKSIDALHNINGKEQIESPFASIYARFSSIAHSKGVPSSSKVAWKIQRSMFLGLEKKFTNVYAYANTKVQAQRKFAQGQGNPSASYSLSSSIAASSSQPNTPARDSKEPIPELIPHKKPSAEDLVTYICFRGTPALPPHLDFFNQNKNNEKHGKEKEKLSETVSKNDVNSSGKATSRKAEKSNDKNNRSDKCDNGTKANNVEKGERKGEKMEKPESIGYAVRKRADQVVEGNRKYKNNERVTRLRERAPKTPEMNRRSPRTRSALKVDSEDEIEREVDEDEDDDIAVSEMSEPKKPPVKKSLTKGKRKTGTSPVKNDQSSPTPEVLPLNEPETPPVVNIRAKRNATKACITPEKVIPTAAEKKAVVVSEKKATPTPEKNEKRDDSVSKKSDVSSKISSRGGKKTPVKRSLKGKTKAQVENDENVTDIVPPKPKRGRKTGDADTSAKPAEKVTQRSQNNTPECETRSSRPMRKTKEAATIYMEWIGLKLNLDDDGSSLDSFPELPNAKETQKIENEMKQNCLKQKLPQKEVPAKKAKTTKKVTAVGKKKAGPAPKKLEGALVEQVNEAVSKEDPDNKEKVETRNDEKAEKNFNDSDDEPLVVQKAEVETKPASTKIKGRASKKKIKSPPKSVNKKKAPAAVKKEEPSINDTQEPEKTELKSGIIEGNGENRPSSEEIAIEDVPKLEKSFSDSDDEPLATKLVTKPSEKDIKNDPEPLQIITEITPVTVPKVSPPKEQKTKISNMSFPAQHIPKIEDRPFLRGPTSPKYPAKAALPVVPATPIHRPDAIVASTPLAQLPVIPMPGPFTPLMERFPSPKVNPSFLTPKYDRNMDRKPPELVTSSLPKNILMSSSASKLDFSGSKPASPNSNATNAKKAEPDTIASANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEAYLGEPLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDEPLKPKTFAPTPPLIRDEKDSGSLSSKTGKDVRSESTWSGKGPSLKATPVVVKEDSREKPSSLLSAEVAKQNSVFESRNSPKPQKLAENTVKEKVSPSTSLKKSESVSKICRDNTKSPKPSTSSATSSPKRIKNAKAIAQITQKKLPAPKRQPVYSTKPGPGETSKKKPMTNSFSAFSPENETSVYSFDKEDDVPPPMAKPFRRHSRRESNADENTSSEKPCKAEKAPVKDAQQNSVSVMLSPEESSKSIKVSLENSEAAALAKAEKPHADPSGLGDSDSEGHTFYIPLQGTGATTTNSGKSDVIQGVAVKLGREGPEGPNQRVIMHATLVTKAQMGSNTTPLPESMNVHEIVKSLLSTNKDLSAPGASKSVPIGTVQPRFKSSAEGQIAVDAALSRVNSNSSLLSGSTKSKPTPPAQKKPKDTTPVKVCNNTAFPRRDDPTQMVEAPIFRPTDKEFQDPMEFIDRITPIAARFGICKIIPPDSFKPECRVSDDMRFTAYNQYVHKMLNRWGPSAKEFSAIKKYLATQSIAMTHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRCVNVENISTEDGESSENDDESDEEVDGVSMECIVKGRSMPLNAFFRIARNTMALWFKNTEPTVSDIEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPTPGPKMKGSPCAKHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKIWYGIPDEQSSKFRKALTALIPTHCQNKTIWLPCDTAMVPPHMLTDRGVSLCRVEQKPGEYVVIFPRAYTSSIATGYVVSESVYFATSSWLDLAKDDFKDIHESCEPAMFSLEQLLFAVGNDQRVSVDILTQIVPMLSEVYDKEVAARQQLKAAGLMQTEKYQQPVAKTKQKPHVPEEQECDFCRANLYISMVRTTEGNIYCLQHALRNINNGNIQAKQCTLIFTYDIEDIQNLIKKIKDRLVQLQKKGASSVSTGKKSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -