Opun000261.1
Basic Information
- Insect
- Othius punctulatus
- Gene Symbol
- NFXL2
- Assembly
- GCA_951805005.1
- Location
- OX638138.1:3691623-3694151[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.1 4.5e+04 -3.6 1.9 15 19 168 172 168 172 0.86 2 6 0.16 3.6e+03 -0.1 0.3 4 10 203 209 202 209 0.92 3 6 1.3e-06 0.029 16.2 16.8 1 19 217 234 217 234 0.99 4 6 1.3 2.9e+04 -3.0 1.1 10 13 241 244 239 245 0.74 5 6 2.5 5.5e+04 -3.8 0.5 5 6 263 264 260 266 0.42 6 6 2.4e-08 0.00053 21.8 16.8 1 19 270 288 270 288 0.99
Sequence Information
- Coding Sequence
- ATGAGCAACGGGCGCTGCAGCAAGCCCTCGAAGAATCCATGGAGCAAGGGCAACCCCATGGCCAAGGGCCAGCCGAAGAAGCAGGACGCACTCAACGGCACCAACAGAAGCTCCCAACAGAAGTTCACGGAGGCCCAGCAGCGCCTAAAGCTTGCCGTCGAGAAGTACGCCAAGGAGTACGAGTCTTCGGAGGACGAAGACGAGCTGGAAACGGCCAGTGTGATTGGTTCCATTTTGAAGGTGTACGAGGCAACGGGCATTAAAGGGGACTTCGTCGGGCAGACGAAGGGATTCCTGGAGGAGATTTTCGTATCTGGCGCATCCACTTGCCTGATATGTATTTCATCAGTTAAAAGGAGTGAATCGATTTGGTCATGTTGGAGATGCTACAATCCGTTCCACCTGCAATGCATCCAGCGCTGGTCGAAAGACACCATCATGCAGAAGAAACGCTCCCTGGAAGACCAGATAATCGTGAAGAAGATCACCATGACCTGGGGCTGCCCAAAGTGCCGCACCGAATACAGTCCCGACGACATCCCCCACGAGTACCGCTGCTTCTGCGGAAGGGCCAAGGACCCGGTGTTTCAGCCGCTGCTGGCCCCCCACTCGTGCGGGGAGATGTGCGGCAAGCCGCTGCAGCCGCCCTGCGGGCACTCGTGTCTGCTTTTGTGCCACCCCGGCGGGTGCCCGCCGTGTCCGAAGACGGTCACGGTGGCGTGCCACTGCGGCTCCGCTAAAAGTAAAACGCAGAGGTGCAGCAACAAGGAGTGGTCTTGCGGAGCCACCTGCAATAAGCTTCTCACTTGCGGTAAGCACAAGTGCTCGCAGGGGTGCCACGCTGGGATGTGCCCCCCTTGCCCGAAGAAGAGCATGCAGAAGTGCATGTGCACCGCGAAGATTAACCTCAGGGATTGCGCTACGCCCATGTGGCAATGTGAAAAGTCCTATGTCGGGTCAGCCCCGACATGA
- Protein Sequence
- MSNGRCSKPSKNPWSKGNPMAKGQPKKQDALNGTNRSSQQKFTEAQQRLKLAVEKYAKEYESSEDEDELETASVIGSILKVYEATGIKGDFVGQTKGFLEEIFVSGASTCLICISSVKRSESIWSCWRCYNPFHLQCIQRWSKDTIMQKKRSLEDQIIVKKITMTWGCPKCRTEYSPDDIPHEYRCFCGRAKDPVFQPLLAPHSCGEMCGKPLQPPCGHSCLLLCHPGGCPPCPKTVTVACHCGSAKSKTQRCSNKEWSCGATCNKLLTCGKHKCSQGCHAGMCPPCPKKSMQKCMCTAKINLRDCATPMWQCEKSYVGSAPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -