Opun000263.1
Basic Information
- Insect
- Othius punctulatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_951805005.1
- Location
- OX638138.1:3695607-3701935[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.2e-07 0.0027 19.5 9.5 1 18 24 41 24 42 0.97 2 14 1.9 4.2e+04 -3.5 0.4 5 10 66 71 66 72 0.72 3 14 1.6e-07 0.0035 19.2 5.8 1 18 77 94 77 95 0.96 4 14 0.3 6.7e+03 -0.9 0.2 1 5 104 108 104 110 0.96 5 14 5.2e-05 1.1 11.1 17.1 1 18 129 146 129 147 0.94 6 14 4.6e-06 0.1 14.5 17.5 3 18 158 173 150 174 0.86 7 14 0.46 1e+04 -1.5 1.2 5 10 202 207 202 207 0.94 8 14 0.018 3.9e+02 3.0 6.6 10 19 223 232 220 232 0.89 9 14 0.012 2.6e+02 3.6 5.7 1 12 242 252 242 252 0.88 10 14 3 6.6e+04 -4.1 2.9 14 18 280 284 280 285 0.86 11 14 4.7e-05 1 11.3 8.6 1 12 321 332 321 332 0.97 12 14 0.00057 13 7.8 17.7 3 19 362 378 353 378 0.88 13 14 0.92 2e+04 -2.5 0.9 8 13 383 388 382 389 0.76 14 14 2.1e-07 0.0047 18.7 11.5 1 18 425 444 425 445 0.86
Sequence Information
- Coding Sequence
- ATGTCTGTGGAAATTAAATCGGACCGCAAAGGGTTAATATGTCGTAATGTATGTGGAAAACCTCTGCAATGTGGTTTCCACAACTGCGATGAAATCTGCCATTCCGGTGGATGCGAAGAGTGTTTGCTTTCTAAACTTAGGACGTGCCCTTGTGGCAAAACCTCCCATCAACTGCCTTGCACGGACGAAGCGCCAACGTGCGGCGATACCTGTGGGAAAACCTTGGAGTGTGGGATGCACATGTGCTATGATCGCTGCCACAAAGGCAAATGTATGTTGTGTCTGGAAACTGTGATTAAGTCGTGCCGATGTGGATTGCACACGAGAGAAATTCAATGCAAGAAAACCTACCTCTGCGACACCAAATGTAAGGAGATTAGAGACTGTAATAAGCATCCATGCAACCGGAAGTGCTGTGATGGTAATTGCCCGCCTTGTGAGAAACCTTGCGGGCGCACTCTGAGCTGCAAAAAGCACACGTGCAGTTCAATCTGCCACCAGGGGCCGTGCTATCCTTGTTGCTTAACCGAATCTGTATACTGCCGATGTGAGAACACGTTTGTGACGGTACCGTGCGGGAAGAAGAGCTGGACAAAGCCACCCAAGTGCTCACAGTTGTGCAAtatGCCATCGGAGTGTCACCACGAATTCAGGGAGCCGCACCGATGCCATTTCGGAAACTGCCCTGGCTGTCGGCAAATATGCAGGAAATCTAAACCAAACTGCTCTCACTTGTGTGAGGCTCCATGCCATACCAGTGTGATGATCAAGATCGGAGGCAAGAAGGCGACGACACCGTGGGAAGAGGAGGCTCCTACACTGGCGAAAAAGGAACTGCCCTGTCCCGATTGTATGGTTCCTGTGCCAGTGACTTGCTTAGgTGGCCATGAAACCGTCAACTTCCCTTGCTATTTGGCGAAGACGTCGAGCTGCTTCAAGCCATGTGGTAGACTCCTAAAATGCGGTAACCATACATGTACCAAACAGTGTCACTCGGTGGAAGCGCAGAGTGACCCATCACTGGCCGGTGCCAACTGCGAGCTATGTGAGGGAGCCTGCGGCAGGGAGCGACCCGGCCACTGCACACACATGTGCACAAAGCCCTGTCATCCGAACCCATGCCCGCCTTGCACACAGATGCTCAAAGCTAAATGCCACTGCGGCCTAGGAAAACCATTCATACCTTGCAAAGATTGGCAATCTTACAATATCTCGGAGCTTGGAGACGAAGTGGCAGTCAGCTGTGGTAATCAGTGCCCAAAGAATTTTGCTTGTGGTCATCGGTGCCGGGAAGTCTGCCACGCAGGTGACTGCCCGAATCAAGACCAGTGCAAGAAAAAGGTGAAGGTGACTTGCGCTTGTAAGCGCCTCAAGCGGGAGTTCTCGTGCGAGACTGTGAGGAGGGGCGACGCCAGTGTCCCCTGCGACGACACTTGCTCGCAAAGGCAGTCGCAGGAGCAAAAGATCAAAGAGAAGCTCGATGAGGAGCGGCGTAAAGAGGAAGAGCTGAGGAACCAGCGGGAGCTGGAGAAGTTTGAGAAAAAGTTTCAGGGGAAGAAGAGGACCCGTGAGAGGAGGGTTGCCGAGGACACCAATGACGAGGGTTGGTTGAGGAATTATTGGCCGCTGATTGTTGCGTTCCTAGTTTGTTTGGTCGGGCTAGTCGTTTATGTAGCGTTGTGA
- Protein Sequence
- MSVEIKSDRKGLICRNVCGKPLQCGFHNCDEICHSGGCEECLLSKLRTCPCGKTSHQLPCTDEAPTCGDTCGKTLECGMHMCYDRCHKGKCMLCLETVIKSCRCGLHTREIQCKKTYLCDTKCKEIRDCNKHPCNRKCCDGNCPPCEKPCGRTLSCKKHTCSSICHQGPCYPCCLTESVYCRCENTFVTVPCGKKSWTKPPKCSQLCNMPSECHHEFREPHRCHFGNCPGCRQICRKSKPNCSHLCEAPCHTSVMIKIGGKKATTPWEEEAPTLAKKELPCPDCMVPVPVTCLGGHETVNFPCYLAKTSSCFKPCGRLLKCGNHTCTKQCHSVEAQSDPSLAGANCELCEGACGRERPGHCTHMCTKPCHPNPCPPCTQMLKAKCHCGLGKPFIPCKDWQSYNISELGDEVAVSCGNQCPKNFACGHRCREVCHAGDCPNQDQCKKKVKVTCACKRLKREFSCETVRRGDASVPCDDTCSQRQSQEQKIKEKLDEERRKEEELRNQRELEKFEKKFQGKKRTRERRVAEDTNDEGWLRNYWPLIVAFLVCLVGLVVYVAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -