Basic Information

Insect: Othius punctulatus
Gene Symbol: -
Assembly: GCA_951805005.1
Location: OX638146.1:5560926-5564208[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.71 1.2e+02 5.3 0.4 1 22 344 365 344 367 0.77

2 9 0.29 47 6.5 0.3 2 23 463 483 463 483 0.94

3 9 2.8e-05 0.0046 19.1 1.4 3 23 491 511 489 511 0.98

4 9 0.0002 0.033 16.4 1.1 1 23 517 539 517 539 0.95

5 9 2.1e-06 0.00035 22.7 1.4 1 23 545 567 545 567 0.97

6 9 0.00088 0.14 14.4 4.1 1 23 573 595 573 595 0.99

7 9 0.00038 0.062 15.6 3.5 1 23 602 625 602 625 0.97

8 9 5.7e-05 0.0092 18.2 0.7 3 23 633 653 631 653 0.98

9 9 0.00064 0.1 14.9 0.6 1 23 659 681 659 681 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.71	1.2e+02	5.3	0.4	1	22	344	365	344	367	0.77
2	9	0.29	47	6.5	0.3	2	23	463	483	463	483	0.94
3	9	2.8e-05	0.0046	19.1	1.4	3	23	491	511	489	511	0.98
4	9	0.0002	0.033	16.4	1.1	1	23	517	539	517	539	0.95
5	9	2.1e-06	0.00035	22.7	1.4	1	23	545	567	545	567	0.97
6	9	0.00088	0.14	14.4	4.1	1	23	573	595	573	595	0.99
7	9	0.00038	0.062	15.6	3.5	1	23	602	625	602	625	0.97
8	9	5.7e-05	0.0092	18.2	0.7	3	23	633	653	631	653	0.98
9	9	0.00064	0.1	14.9	0.6	1	23	659	681	659	681	0.93

Sequence Information

Coding Sequence: ATGGGAATGGTAAACAAAACTGGATCGCGTCTGGTGTTTGTTTGCACTTTTGGGCAGCGCGGGAACTCGGTTTTCCACCTCGGGGCTCCTGGGCCCCATTTGATGTGGCCCCGGGCGTCGGGGGCGCGCGGCGGACCCGCCGGGACGATGCGTGTGCTTCGATCGAAAGGTTCTGGGTTCGACGCCATCTTACACATCTGCTGGACGGGCGGAGGTCGCCGAGACGTCCGCGGCCCCGGCGGCGGCTGCGGGGCCGGCAGCCGAAGCGTACGCGCTCGGGGGGGCCCGCGGCTGCCCCCGCACTCCACTGGAATTCACGTACCACtcaatttccgccaaaacgtcGGACGGCTCGGGTTCGTAACTCCACCTAAGTTCCCGTGGCCACTTTACAGTGTATCGAGCGGACGTACGTCTGCCTTCCAGGGATGGGGGCTCCCACGTGTTAGACAGAGATGGAGATACCGGGGCGTCGTCTCCGCGCCGTCACGTGACCACCAGCCCTTGTTGCAATTCTCGCAGACGTGCCTATCCAAAGCCGGGAGCATGACCtgcttatttaataagtacaaCTTTGAAGAAGTGGACACCAAAATTAGCGAGATGATCATATCTTGTGCAGCAGTGCagATATGCGAAGGTGATGGTTTACCAGAGCAAGTGTGTGGGCAATGTTTCGAGGAAATTTTACGGGCCGTTGCATTCCGAAAATTGTGTGAGGAGTCTGATGCCTCACTGAGGGAAGATCGGAACTCTCTGCTAAAAGTTCAAAACCTCGTTGGGGTTGAACCAGAGAACGACCATCCAATAAATTTGACCGAGTTCACAAACGATGTAAAGCAGGAGAATTTAGATGATAGCATGGAAGTTACTGTTAGTGTAGTGAATAAACAAAAGCAACTTGTAGCAAATACCGAACTGAATCTAAATGAAGCGAGTGGCGACGGTAATATGGGATCCGTCAAACAAAATTCTATCGAAAAGGTTAATGAAGAAGTTTGCGGTACAAAGGAAGAGGTGAGACGTCAATATCAATGCCCGCTATGTGgcatttttctcaaaactttATTGGAGTGCAGCATCCATATAAATGAGGAGCACGATGAACCCATCGATCCTCAGCAAGACGACAGTCAATCTTTAAACGATAAAGAACAAAATCAGCAAGACGACAGTCAATCTGCAAACAATAATGAACAAAATCAGCAAGATGACAGTCAATCTGCAAACAATAATGAACAAAATCAGCAAGATGACAGTCAATCTGCAAACAATGAAGAACCAAATCAGCAAGACGGTATCAAATCTGTAAACAATGAAAAACCAAATCAGCAAGACGGTATCAAATCTGTAAACAATGAAGATCAAAATTCCCACGGTTTTCGAACCTGCGGCGTGTGCAACTACAACATCAGTGTCTCCAACTTCTCAAAGCACATGGCCACCCACTCGGGGGAGAGGCGGTTCGGGTGCGAAGTATGCAGCAAGCGGTTCAAGTCGAAGAGGAACCTCGAGTCGCACCGGGCCACCCACTCGATAGGCACGCGCTACCTGTGCAACTTCTGCGGCAAGATCTTCAACAGGTTCGGGTACTTCAAGAAGCACGTCGCCATCCACACAGGCGACAAGCCGCACGAGTGCGACGCCTGCGGGAAGCGCTTTTCCGACCGCTCGGACCTGAAGCTGCACGAGCGGACGCACACCGGCGAGCGGCCCTACAGGTGCGACACATGCGGCCAGTGCTTCCGGCTGAAGATTGACAGGAACAGGCACGTCAGGAAGCACGGGCCGGGGGAGAAGATGCACGAGTGCCGTGTGTGCCACCAGCGGTTTATGACCTCATCGGGCCTGATCGTCCACATGAAGTCGAAGCACGCAAACGAGAGGCCCTTCGGTTGCAAGGACTGTGGGAAAGCTTTCGTGTCGGCCTCTTGCCTGGGGGTGCATTCCAGGACGCACTGGGGAGAAAGGCCGCACGTCTGTATTGTGTGCGGGAGGGGTTACAAAGGACGCAAAAATCTTACTATACATATGAAAGTGCATGAATTAGTTCATTGA
Protein Sequence: MGMVNKTGSRLVFVCTFGQRGNSVFHLGAPGPHLMWPRASGARGGPAGTMRVLRSKGSGFDAILHICWTGGGRRDVRGPGGGCGAGSRSVRARGGPRLPPHSTGIHVPLNFRQNVGRLGFVTPPKFPWPLYSVSSGRTSAFQGWGLPRVRQRWRYRGVVSAPSRDHQPLLQFSQTCLSKAGSMTCLFNKYNFEEVDTKISEMIISCAAVQICEGDGLPEQVCGQCFEEILRAVAFRKLCEESDASLREDRNSLLKVQNLVGVEPENDHPINLTEFTNDVKQENLDDSMEVTVSVVNKQKQLVANTELNLNEASGDGNMGSVKQNSIEKVNEEVCGTKEEVRRQYQCPLCGIFLKTLLECSIHINEEHDEPIDPQQDDSQSLNDKEQNQQDDSQSANNNEQNQQDDSQSANNNEQNQQDDSQSANNEEPNQQDGIKSVNNEKPNQQDGIKSVNNEDQNSHGFRTCGVCNYNISVSNFSKHMATHSGERRFGCEVCSKRFKSKRNLESHRATHSIGTRYLCNFCGKIFNRFGYFKKHVAIHTGDKPHECDACGKRFSDRSDLKLHERTHTGERPYRCDTCGQCFRLKIDRNRHVRKHGPGEKMHECRVCHQRFMTSSGLIVHMKSKHANERPFGCKDCGKAFVSASCLGVHSRTHWGERPHVCIVCGRGYKGRKNLTIHMKVHELVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -