Opun009149.1
Basic Information
- Insect
- Othius punctulatus
- Gene Symbol
- HIVEP1
- Assembly
- GCA_951805005.1
- Location
- OX638139.1:4660683-4673998[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00014 0.022 17.0 0.9 1 23 156 178 156 178 0.98 2 8 0.0078 1.3 11.4 4.3 1 21 184 204 184 208 0.89 3 8 0.092 15 8.1 0.3 2 21 384 403 383 404 0.93 4 8 5.4e-06 0.00088 21.4 2.0 1 23 1040 1062 1040 1062 0.99 5 8 3.8e-06 0.00061 21.9 5.0 1 23 1068 1092 1068 1092 0.93 6 8 7.8e-06 0.0013 20.9 1.2 2 23 1529 1550 1528 1550 0.97 7 8 0.0013 0.22 13.9 2.2 1 23 1556 1580 1556 1580 0.91 8 8 0.00094 0.15 14.3 2.9 1 23 1598 1622 1598 1622 0.93
Sequence Information
- Coding Sequence
- ATGGACAACGGGACTGACCGGTACCTACACAAGAAGTTCAAAAAGCAACTGAGTATCGAACCCAAGACCAAGAACAATACGACGGGCCAGACCACTAGGATTAACAACAGTGTGCCAACAAATAGTACAAATAGGAACGAAACTAGTGTTAATAACTTGTATGTGAAGTCTTCCATATCAAATTCGATAGTGTGCAGCAGCAATGATCCCACGGTAGTAATTAATAGTAGTTTAGAGGAGTCGAACGGCGTTAGTAATAGGATTTCATCTGGTGAACAATCGGCTGACATATCATTCGTTGTTAATAATCAAAGTGTAGTTAATCACGAAACGACCACAGTAGCCACGTCTTCCATTTTAACCGGCAGCAAGGAGGTGTACCAGGAAACCGGAGACTCCGAGGAGGCCGAAGGCGCCAAGCCAGATTCGGGGACCGCCGACAAGGCGAACGCTTCCGGTGGCAAATACGTCTGCACGTACTGCAACCTCGCGTGTTCCAAGCCCAGCGTGCTCCAGAAACACATAAGGGCGCACACCAACGAGAGGCCCTACCCCTGCGTGAGTTGCGGGTTCAGCTTCAAGACGCGCTCCAACCTCTACAAGCACTGCAGGTCGCGATCGCACGCCAACAGGGTGATGGGCCACAAAGCCAGGGAGATGGCCAAGGAAATCGGGGCCGAGGCGGACGGCGACAGCAAACCGGAAGTGGCGGAGCAGCAACCTGTTGTCGAGGCCGCCCCGATTACGCGGTCGCCAGAGCCGTGCAAGGACCAACCCCAGCTCCAGGAGAAGTCGAAACCGTACAAGCCCAGGTTTCACACGGCCAAAACGTTCTACGACGAGAACTTGGAGAACAGCCCTCTGGAGAACAAGCAGCCCAGCCCGGAAATGATCTCGCTGCGCATCACGGAGCTTATAGATGAGAACAATTCTATAGTTAACGAGCGCCCGTTCAAGAGGAGGCTGTCGATCTCACACAACGACAATCATTGCGACGTTGTTTACATAAAAGAGGACAAAAGTGCGCACGACGAGCCTCTGAACCTCACTAATAAAAACAGGAAGCGGTGCCTGAGCGAGGTTACGGAACCGACGACGCAGAAGAGCCTTATCAAGGAGCTTCTGCTGAAGAACCTGTACGCCGACATGCAGTGTCCGCACTGCAAGATGATCTTCCAGACGGTGACCGAGCTTGAGCTGCACAAGATGCGGAATTGCAAGGGCATCACGAAAACCGGCCCACGCTACAGTCGAAGTAGCTCGGTAAATGTAGCCTCGATCCTAATGCAGAATAAAAACGCATTCGACAACATCCCCCACTTGCAGAACGCCGTGTTCCCGTTGAAATCGCCGGGACCATTTCTAGGCAAGACCAGACTTGTCGAGAGCGACAAGAGCAAATCGGTCTCCTACGAGGACTGCGTGCAAACGCCTTCTTACTTTCCGTGCAAGAATGATTTGATGAAGTCGCCCCAAAGGTACTCTCTGTCGCCACTTACGTTATCGTACGACAGGATCAAGAAGACTCCTGTGAAGCTCTTCGGCGGCGAGGTCAAGATAACGCAGACCTCTGGGGAAACGAAAAGCTTCAAGATCGACGGCAAAGATCGCGAGAAGTATAACAGCGACAATAACTATACGGAATACAGCGGCAAAATGAGCGAAAATCGGGTGGTTAAGTCGACCCTGCAATCAGGAGGCACCGTCCTCCAAAGCAAACCATCTTACATCAAACAAGAGTCGTTACGAACCTCGCCTGATGTCATACGGGTATACGACAGCGCCTCGCCAAACATCGACATGGGCGCGGAAAAAACTGCAAAGATGCACTACGAGGATGCCCCGCGCGACGCCTATGACGGCGACCGCATCCTGGTGAGGCCCTCCAAGGCCGCCAACGGATCTCTAATGAATGACGCCAACCACGTGACCAACGCCTACAACAAGTACCCGAACATCATGGACTTCAGCCAGAACGCGGTCAAGCTGCTGGCGCCCAATCTGAAACAACTAAATTTAACTATACCCGGCCTTCCTATGCCCACGACGTTCATCGAGACCCCCTCGCCCCTCCTGGCGGTGACCAAAACATACGACAACCAATACACAAGGCTCAACAGCCCCTCGCCGCACGACAACCAATACAAAAAACACAACCGCACACCCCCACACGAAAGCCCCAAGCACGACGATGACTACAAGAACCGGAAGTTCGACCACGGAACGCAATCTCGCAGGTTCGAACACGAGACCGCATCCAGGAAGTTCGAGCCGGAGGGCAAGAGGGACCCCGAGAAGTTCACCACCCCCTCGAACGGGAAAATAATGAACCCCATGAACCTTTTGATAAACGGCAAAGTCGTGCGGTACGTCCCAGGAATGCCGGGGCCGGTGATCGCCGAGCCACCTGCGGAACAACCCACGGTGATCACCTCCGTGCAGAAGCCGCGGCTCGTGCGGCCCAACATAATGATAACCCCCGTGGACCAACCCAAACCGGAAGCCGACAAGAAGACCGCCGACGCTTCGGAAATCAAAACCGAGATGCCGAGCCCCAGGCCCGAGCTGCGCTCGCCCATCCCCAAGTCGCCCACGGAGCCGCCGAGGAAGTTCGCCAGGCCCAACAGCCTGGCCCTGAAGCCGAGCATGTCCTCGCTGAAGCAACACCACGGGCTCACGCCCACCATGTTCAACCAGATCCTGATCAGCCCGGACACGCCGCGGGGCGCGAAGAAGTACAACGAGCACTTCCTCCACGGCAACTACTTCAGCTACCTGGGGCTCAAGAGCTCCACCAAGCCGGTGTACTGCACGCTGAACAAGACGCAGCCCTTCTACGTGCCGCACTTTAAGAAGCTCAGCATGTACTCCGAGTGGAGGCAGCAGGACCACAAGTCGGACAAGCTGTACGTCAGCGCCTACGACTCGAAGCAGACGCCCAGGAAGTACACCATAGCTGGGAAGTACGACGCAGACTACATCGTCCACTCCAGTTATAAGTTTACCGCGAGCGAGGCGGCCTCCGCAAAAGAGGAAACGCAGAAGCAGAATTCGATACTTGGAGGATACGAGTCCAACGAGGACTACACATATATTAGGGGAAGAGgtCGAGGACGGTATGTTTGCGACCAGTGCGGCATCAGATGCAAAAAGCCGTCGATGCTAAGGAAACACATTCGGACGCACTCGAACGATAGGCCTTACAGGTGCACCCACTGCAACTTTAGcTTCAAAACGAAGGGCAACCTAACTAAACACATGAAGAGCAAGGCGCATACCAAAAACTATTCGACGGGCGGCAATAGCTTGGGCTCGAGCGCCCCGGCGGGGGCTGCCCGCTCGTGGGGATCTTGGGGATCTTCGGACACCGAAGATAGCGGGATGAACAGCAGTGATGACTCTTCGACTAGACAGCAGGAGCATGAGGCTGCCTATGGCCTGCTCTCGCTCTCTCAGAAACCTGCGACCACCATGAACATAAACCCAGAGATGATGAGCCCGACGTCGTCAAGCCTTAGCCCAATATCCACGATACACAGCGCAGATAATCAAACTGCGACGTCGTCGAGCTTCATCAATGCTGAGCAGCTTGCACACGTCTCGAAGACAAGTTATGCGAAGAATAAGATCCTGGACCAGCCTAGGCATACCCCATTTAGCGCCTCGAAACTGTGCAGGGCTGCGACGCCCGGTGGCAGGTCTTCTGAGGACAGCACTGTCCGCCTAAGCCAATATCTTGGTATAAGCCAGACAACTAGGACCCTCATGTACCCTTACACATCGCAGAATGCCGAGCCGGAAGTGGATGTTGTTGAGCAGGAGCCTGAGAAGCCCGCTGAGCGGAAAAACATCATTCACTTCAATGTCATTAAGCGGTACAATAATCCTCAACCATCGAATTCACTTTACAACTGCAGCAGAATGACAAACACGGACGTGACTTACACAGACAATAAAGCTGCGATGTTATCGCCAATTAACCGTGAGCTGGCTTACCCTACCGAGGCTCCAGTTGTGGAGCATTCAGAAGAGCGGCTGGGCCATTTTCGGAAGAGGAAGCTCACACAGCAAGAGGTGGTGCAGCCCAGTGGCCTCAAGCTGCAGAAAAATGACTCTGAGGTGATGGACTTATCAATGCCGCAGAGTTCGGAGAAGGCACAGTTGCATAACGGGCACGTTGATATCAAGGAGCGATACTACGAATGTGAGCAGCCACGGTTGAAGAACTATCAGTCTTGTCTGCAGGTGGAGACTAACTTTATAAATCAACAGCCAATTTACGAGAAAGATAGCAATCGGATCAACGTGAATTATATCATTCAAGAAGCGCCTGCAGCTACAGgTTCGGATGTGGCTAATAGTAGCACAAAATCTCTGGAGTACGACAACAGTGCTATGGAAACCCTGGCGGACATAGCGACGAAGCAGGAGAAGCTTGAGAAAAACTCTGTGGCGAAAAACGTGGCCACCGAGTTTCTTAAGCTGGCCACCAAAAACGAGTACCTGAACGGCGATGACAAGGGGGGCTTCGTGGCAAGCAACAAGGAAGTAAACGATATGGTTGTCAAGTCGGAGGAAAACAAGAGCTGTACGATATGCTCAAAGAACTTCAGCAAGCCCTCGCAGCTAagGCTCCATATGAATATACATTACATCGAGAGGCCGTTCAGATGCGAGCCATGCTCGACAAGTTTCAGAACCAAAGGGCATCTGCAGAAGCACGAGCGTAGTGCAAGCCACCATAACAAGcTTTCATCATCTCCAGCGCTATCCTCGTCAGAACCAAGGCCTTTCAAGTGCACAGACTGCAACATTGCGTTCCGCATCCACGGCCACCTGGCCAAGCACCTGCGCTCGAAGATGCACATCATGAAGCTGGAGTGCCTGGCCAAGATACCGTTTGGATTGTACGCTGAGCTGGAGAGGTCCAACAGCTTATTGACCGAGATAAACACAGCTGACGGGGATCAATGTCTCGATAGCTTAAAGATGTTAGCGAAAAAGGTATTTATCAACGACCCAGGTAAGTTGAATCAGTTGGAGGAGAGGAGCACAGACCACACAGAGACGAGCCTGGATAGCTAG
- Protein Sequence
- MDNGTDRYLHKKFKKQLSIEPKTKNNTTGQTTRINNSVPTNSTNRNETSVNNLYVKSSISNSIVCSSNDPTVVINSSLEESNGVSNRISSGEQSADISFVVNNQSVVNHETTTVATSSILTGSKEVYQETGDSEEAEGAKPDSGTADKANASGGKYVCTYCNLACSKPSVLQKHIRAHTNERPYPCVSCGFSFKTRSNLYKHCRSRSHANRVMGHKAREMAKEIGAEADGDSKPEVAEQQPVVEAAPITRSPEPCKDQPQLQEKSKPYKPRFHTAKTFYDENLENSPLENKQPSPEMISLRITELIDENNSIVNERPFKRRLSISHNDNHCDVVYIKEDKSAHDEPLNLTNKNRKRCLSEVTEPTTQKSLIKELLLKNLYADMQCPHCKMIFQTVTELELHKMRNCKGITKTGPRYSRSSSVNVASILMQNKNAFDNIPHLQNAVFPLKSPGPFLGKTRLVESDKSKSVSYEDCVQTPSYFPCKNDLMKSPQRYSLSPLTLSYDRIKKTPVKLFGGEVKITQTSGETKSFKIDGKDREKYNSDNNYTEYSGKMSENRVVKSTLQSGGTVLQSKPSYIKQESLRTSPDVIRVYDSASPNIDMGAEKTAKMHYEDAPRDAYDGDRILVRPSKAANGSLMNDANHVTNAYNKYPNIMDFSQNAVKLLAPNLKQLNLTIPGLPMPTTFIETPSPLLAVTKTYDNQYTRLNSPSPHDNQYKKHNRTPPHESPKHDDDYKNRKFDHGTQSRRFEHETASRKFEPEGKRDPEKFTTPSNGKIMNPMNLLINGKVVRYVPGMPGPVIAEPPAEQPTVITSVQKPRLVRPNIMITPVDQPKPEADKKTADASEIKTEMPSPRPELRSPIPKSPTEPPRKFARPNSLALKPSMSSLKQHHGLTPTMFNQILISPDTPRGAKKYNEHFLHGNYFSYLGLKSSTKPVYCTLNKTQPFYVPHFKKLSMYSEWRQQDHKSDKLYVSAYDSKQTPRKYTIAGKYDADYIVHSSYKFTASEAASAKEETQKQNSILGGYESNEDYTYIRGRGRGRYVCDQCGIRCKKPSMLRKHIRTHSNDRPYRCTHCNFSFKTKGNLTKHMKSKAHTKNYSTGGNSLGSSAPAGAARSWGSWGSSDTEDSGMNSSDDSSTRQQEHEAAYGLLSLSQKPATTMNINPEMMSPTSSSLSPISTIHSADNQTATSSSFINAEQLAHVSKTSYAKNKILDQPRHTPFSASKLCRAATPGGRSSEDSTVRLSQYLGISQTTRTLMYPYTSQNAEPEVDVVEQEPEKPAERKNIIHFNVIKRYNNPQPSNSLYNCSRMTNTDVTYTDNKAAMLSPINRELAYPTEAPVVEHSEERLGHFRKRKLTQQEVVQPSGLKLQKNDSEVMDLSMPQSSEKAQLHNGHVDIKERYYECEQPRLKNYQSCLQVETNFINQQPIYEKDSNRINVNYIIQEAPAATGSDVANSSTKSLEYDNSAMETLADIATKQEKLEKNSVAKNVATEFLKLATKNEYLNGDDKGGFVASNKEVNDMVVKSEENKSCTICSKNFSKPSQLRLHMNIHYIERPFRCEPCSTSFRTKGHLQKHERSASHHNKLSSSPALSSSEPRPFKCTDCNIAFRIHGHLAKHLRSKMHIMKLECLAKIPFGLYAELERSNSLLTEINTADGDQCLDSLKMLAKKVFINDPGKLNQLEERSTDHTETSLDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -