Basic Information

Insect: Othius punctulatus
Gene Symbol: L
Assembly: GCA_951805005.1
Location: OX638147.1:34742208-34778188[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 3.3e-07 5.4e-05 25.2 0.6 1 23 74 96 74 96 0.99

2 20 0.21 35 6.9 6.0 1 23 102 124 102 124 0.97

3 20 7.6e-06 0.0012 20.9 3.9 1 23 130 152 130 152 0.99

4 20 0.0014 0.23 13.8 1.2 1 23 158 180 158 180 0.97

5 20 0.022 3.6 10.0 0.2 1 23 206 229 206 229 0.93

6 20 2.4 3.9e+02 3.6 1.3 3 23 262 283 260 283 0.88

7 20 0.025 4.1 9.9 0.1 1 23 320 343 320 343 0.94

8 20 0.41 67 6.0 0.1 3 23 465 485 464 485 0.94

9 20 2.3 3.7e+02 3.7 7.4 3 23 495 516 494 516 0.92

10 20 0.14 22 7.5 0.5 1 23 521 544 521 544 0.92

11 20 0.00071 0.12 14.7 0.6 1 23 605 628 605 628 0.97

12 20 1.4 2.2e+02 4.4 0.6 1 23 678 701 678 702 0.84

13 20 0.00025 0.04 16.2 4.4 2 23 713 734 712 734 0.97

14 20 7.8e-05 0.013 17.7 0.6 1 23 743 765 743 765 0.97

15 20 0.59 97 5.5 0.7 2 23 773 794 773 794 0.96

16 20 1.7 2.7e+02 4.1 0.2 1 15 842 856 842 863 0.79

17 20 0.071 12 8.4 0.1 1 23 897 919 897 919 0.91

18 20 0.26 43 6.6 0.2 2 23 928 949 927 949 0.95

19 20 0.0039 0.63 12.4 0.1 1 23 957 979 957 979 0.97

20 20 0.011 1.8 11.0 2.2 1 23 986 1008 986 1008 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	3.3e-07	5.4e-05	25.2	0.6	1	23	74	96	74	96	0.99
2	20	0.21	35	6.9	6.0	1	23	102	124	102	124	0.97
3	20	7.6e-06	0.0012	20.9	3.9	1	23	130	152	130	152	0.99
4	20	0.0014	0.23	13.8	1.2	1	23	158	180	158	180	0.97
5	20	0.022	3.6	10.0	0.2	1	23	206	229	206	229	0.93
6	20	2.4	3.9e+02	3.6	1.3	3	23	262	283	260	283	0.88
7	20	0.025	4.1	9.9	0.1	1	23	320	343	320	343	0.94
8	20	0.41	67	6.0	0.1	3	23	465	485	464	485	0.94
9	20	2.3	3.7e+02	3.7	7.4	3	23	495	516	494	516	0.92
10	20	0.14	22	7.5	0.5	1	23	521	544	521	544	0.92
11	20	0.00071	0.12	14.7	0.6	1	23	605	628	605	628	0.97
12	20	1.4	2.2e+02	4.4	0.6	1	23	678	701	678	702	0.84
13	20	0.00025	0.04	16.2	4.4	2	23	713	734	712	734	0.97
14	20	7.8e-05	0.013	17.7	0.6	1	23	743	765	743	765	0.97
15	20	0.59	97	5.5	0.7	2	23	773	794	773	794	0.96
16	20	1.7	2.7e+02	4.1	0.2	1	15	842	856	842	863	0.79
17	20	0.071	12	8.4	0.1	1	23	897	919	897	919	0.91
18	20	0.26	43	6.6	0.2	2	23	928	949	927	949	0.95
19	20	0.0039	0.63	12.4	0.1	1	23	957	979	957	979	0.97
20	20	0.011	1.8	11.0	2.2	1	23	986	1008	986	1008	0.97

Sequence Information

Coding Sequence: ATGCTATTTAAAGGCAAGAGCAGCAGATTGGAGATGGTCATCGAAAAGATACAGTCCAATAAGGAGAACTCGGACACGTCCGATACCAAAACAGgGCAAGGTAGCTCCCCATCCAGCAGTTCCGAGCAGGCGTCTCCGGCTAGTTCCTGCCAAAGTTCCCTCAGCGATGCCACCGAAGCCGAGGAGACCTTCACAATGGGTGCCACAGCCACAACCCCTTACGAATGCAATATCTGCAAGCGGGCGTTTGCCCGATCTTCTTTACTAAGCAAACACATCCAGACGCACACCGAGCAGTTGCAGTTCAGCTGTCCGTATTGCCGGCGACTCTTTAAGCACAAGAGATCAAGGGATAGACACACTAAACTTCATACAGGTGATAAAAAGTACAAGTGTCTTCACTGCGACTCGGCATTCGCCAGGAGCGATCATCTGAAGATCCACATGAAGACTCACGACAATAAGAAGCCACATCAGTGCGAGCTTTGTAATCGAGGGTACAACACGGCAGCAGCTTTGGCCTCCCATCAGCAGCACCACTCCAAGCAGGAGCAGCGGCGTTGCGGAAGCAGTGCCAGCAGGAGCAGCGCCGTCAGCACCCCTAGTCCAGGCAATTTCCGGTGCCTGCAGTGCCCCGATACGTTCGAAAAAGCCGAGCAATTACAGAATCACTTAATAGCGACACATAAAAACATCTCCTCGCCAGCGCTGCAGCCCAATAACTTACTCATCGATTCTGGATTCAATATATTAAAGACAGCTATTGACTTGCCGAAAATAGCCTGCATGTACTGCGGTAAAGATTTCCTGAGTATGAACCATATGTATCAGCACATACACGAGGAGCATCGTGCGATTTTCAATAGCATTTCGCAAAATATGAATTACACCCCGTTGCAATCACCGGGCATTGAGGATTTATCGCCCAAACAAGCACGCCAGAATAACTCGCCAACGTATGCCTGTGATCGGTGCACAATGAGGTTCGATTCCCCGCTCCTGCTGCAAGAACATATTGAAAACGTGCATTGGGGACCCTCAGGACGTTATAAATACGACTTCCCTTTGTCGAATTCGAATATTTCGTTAGACAAAGCGCACCCCAACGTGTCGCAGTCCAAACCGACGGACCTGAGCCGCAAAAGGCGGAGCGACAATCCTTCCGAGTATAAAACTGAGAAACGAAAAGCTGAGGATCCTCTAGTCACAAAGCAAACATCGCCCTCCACAGGTAGTCCTTACGAGTCGAACGACAAGCCCTGCATTTGTTCGTACTGCTACGCGCAAATGCCCAACTTCAAGATGTTCCTGCTACACATGGAAACGCACGTAGCGATGAATGCTACAACCACAACGCTACCCTTAACTACCTCTAATAATATAATCGGTTGCTGTCCACTTTGCGGTGAACCGGCGAGAAATGCGCTGGAATTAGGCCGCCATATATTTGGACACGCCATCGCAAACGTAACTGCGAGATGTTGCCATTGCTGCAAGAAACCGTTTGATCATATAGATCAACTGCAGAAGCATCTATTAGAAGCTCATTCGCAAACTGTGTACAAATGCACTATATGCAGCGATATATTTGAAACGCAACTTGCGCTACAGGTGCACTTTTCCAACAAGCATAGCCCCGAATGCAAGCACTACAGGTGTAATTTGTGCTCCGATCAAGTTTTCCACGATAGACTCACCGCGGAATTACACGTTAACATGAAGCACAGCATTCAAGGGCCACTCGGCTCAAACGCCAGAAGTTACCACTTGTTAAGGTTTCCTGACGTTGAGCCACGAGTGGACTTCCCAGTGTATCAGTGCCCCTTCTGCCAAAAAGCCTTCAAAGATGAGTATCTACAATACGTCCACATTTTAAAGGAGCACAATGATACACGAGAGgGCGAGAACTATTTGTTAGAAGCAACGGCTGTGGGTCGACACGTTCCGTCCGCTTCCCCAAACTTCCCTTATAATAAAACTGTTTCCTCCCCCGAAACCCTCAATAAACTCGATATTAAAGTGGGGAATAATTATAGTTGTGAAATTTGTAATCGCACCGACATCACCAGCGAAGCGGAATTGACGGCGCACAAAAAACTACACCACGCCAAATCCAAAGTGGGCACCGTAAGTTTGCAGTGCGCTTACTGTAATGAACACTGTAAATCTCGAAGTGACTTGGAGAACCACATGAAATCTCATCAAGTCGCCTGCGGCAAGGGCaaacataaatgtaatatatGCGACGAAATATTTTCTTCCAACGGCACGTTAGCCGAGCATAAGCTCTCCCACTGCAAAATTGTTGCCGGCAACAGTTGCACCCAATGCAAAACCGTACTAATCGACGAGCAATCGTTCTACAATCACCAGTTGCAGCACAGCAACACGTCATCGGTCAATAAGTCGAACTCGCAGATCTCGCTTCCGGCGAACTGCATCATCTGCTGCCAGACGCTTCAAACGGACGTCGAGATCAAGCTTCACGCCAAGTTCCATCTGCGCCACCTCCTCCAGAAGGAGTTCATCTGCGGCGtctgcaataaaattttcgacGGCCAACACATGTCCGTAAAGCACGTGGAGAAGAACAACACCCACATACCGATTAACATATGCAAGGAATGCCTCTCCATCTCCACCGAGGCGTCGTTCAGTCCCCACGTCGACGTCGACCAGAAAAAACTATTCGCCTGCCTCAAATGCCCGCAAACCTTCGAAAGCGAAGACGAGATCCAAAACCACGCCACCGATCACATGATGAACGAGGAGCCTAATCTCGAGTGCCACTTGTGCAGGAACGTTCTACCTTCCCCGACGAAATTGCAAATTCACTTAATTGAACATAATTTCATGGGAATGGGTCAATATAGATGCTACGTTTGTTCATCCGTATTTACGACGGCAATCGGACTACGTAGCCACATTATTGGGCACGGATTAAACCATAGACCTTACGAGTGCAACGATTGCAAAATGAAGTTCTTCTTCGAGACGGAACTGGAGAACCACAAATACAGCCACCTGCACCACCAGCAGAAGACCTACGCTAAAAACGGCTCCGATTACACCGAGAAAAATAAGCCTAGGCAATACGTGGAATGCAAAATATGCCTAGGTTCATACCCCGAGAGCGTTTACTACACGGAACATATACATACctgtaaaatactgaaaactGAGGACCTATCAGATAGTCCTATAGAGATTAAAATTGAAGGCCAAAATGATGCGATGGATGAAAGCGAGAGTAAAGTGGAAAACAAAAGCGaacaacaataa
Protein Sequence: MLFKGKSSRLEMVIEKIQSNKENSDTSDTKTGQGSSPSSSSEQASPASSCQSSLSDATEAEETFTMGATATTPYECNICKRAFARSSLLSKHIQTHTEQLQFSCPYCRRLFKHKRSRDRHTKLHTGDKKYKCLHCDSAFARSDHLKIHMKTHDNKKPHQCELCNRGYNTAAALASHQQHHSKQEQRRCGSSASRSSAVSTPSPGNFRCLQCPDTFEKAEQLQNHLIATHKNISSPALQPNNLLIDSGFNILKTAIDLPKIACMYCGKDFLSMNHMYQHIHEEHRAIFNSISQNMNYTPLQSPGIEDLSPKQARQNNSPTYACDRCTMRFDSPLLLQEHIENVHWGPSGRYKYDFPLSNSNISLDKAHPNVSQSKPTDLSRKRRSDNPSEYKTEKRKAEDPLVTKQTSPSTGSPYESNDKPCICSYCYAQMPNFKMFLLHMETHVAMNATTTTLPLTTSNNIIGCCPLCGEPARNALELGRHIFGHAIANVTARCCHCCKKPFDHIDQLQKHLLEAHSQTVYKCTICSDIFETQLALQVHFSNKHSPECKHYRCNLCSDQVFHDRLTAELHVNMKHSIQGPLGSNARSYHLLRFPDVEPRVDFPVYQCPFCQKAFKDEYLQYVHILKEHNDTREGENYLLEATAVGRHVPSASPNFPYNKTVSSPETLNKLDIKVGNNYSCEICNRTDITSEAELTAHKKLHHAKSKVGTVSLQCAYCNEHCKSRSDLENHMKSHQVACGKGKHKCNICDEIFSSNGTLAEHKLSHCKIVAGNSCTQCKTVLIDEQSFYNHQLQHSNTSSVNKSNSQISLPANCIICCQTLQTDVEIKLHAKFHLRHLLQKEFICGVCNKIFDGQHMSVKHVEKNNTHIPINICKECLSISTEASFSPHVDVDQKKLFACLKCPQTFESEDEIQNHATDHMMNEEPNLECHLCRNVLPSPTKLQIHLIEHNFMGMGQYRCYVCSSVFTTAIGLRSHIIGHGLNHRPYECNDCKMKFFFETELENHKYSHLHHQQKTYAKNGSDYTEKNKPRQYVECKICLGSYPESVYYTEHIHTCKILKTEDLSDSPIEIKIEGQNDAMDESESKVENKSEQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -