Opun039799.1
Basic Information
- Insect
- Othius punctulatus
- Gene Symbol
- FKBP46
- Assembly
- GCA_951805005.1
- Location
- OX638143.1:34532711-34539469[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.009 1.5 11.3 0.0 1 23 442 465 442 465 0.97 2 11 5e-05 0.0082 18.3 1.0 2 23 490 511 489 511 0.97 3 11 0.00052 0.085 15.1 1.3 1 23 517 539 517 539 0.98 4 11 0.00018 0.03 16.6 0.5 1 20 545 564 545 567 0.94 5 11 8.1e-06 0.0013 20.8 0.6 1 23 573 595 573 595 0.98 6 11 1.8e-05 0.003 19.7 0.3 1 23 601 623 601 623 0.99 7 11 0.00034 0.055 15.7 1.8 1 23 629 651 629 651 0.98 8 11 1.3e-05 0.002 20.2 3.2 1 23 657 679 657 679 0.99 9 11 1.2e-05 0.0019 20.3 2.5 1 23 685 707 685 707 0.98 10 11 0.00013 0.02 17.1 1.2 1 23 713 735 713 735 0.98 11 11 8.9 1.4e+03 1.8 1.5 5 23 745 763 744 763 0.92
Sequence Information
- Coding Sequence
- ATGGAACCGCAGAAGCGGTACTCGCAAAAAGTTGAGAAATCCTTCCACGTGTCAATGGCTGCACTAGATATCAATTCATGCACAGACGAACCTGTGCAAGTAATGTGCGGATTTGAAAGCAGAAAATACCTTCTTTGCACGTTGCAAAAgggtaaaatatttcaaaattcacttgatttgaattttgatGTGGGCGATGAAATCTCATTTGTTACAAATGGAACATCACACGTGCATCTTACCGGTTATCTGAACGACGATGTGATGGATGATTTGGACGTCGAAGACGATGATGACGATGAAGAAGAAGTCACAAGTGATATTGGAAACATAAGTCCGAGCAACATCGTTTCGGGCAAACGACCTAAAATCAAAGTCAGCGCTGAATTGCAACGTAAGTCCTTACAACAAAGTCAGATGCCATCTTCTAACTTtgcaagttttgtttttttagctCCTGCCAAGAAATCCAAGACAATGGAATTGCTAGCGGAAATAAACAGTCTTGATGAGGACGACTCTGATGATTCCGATGTAAACCTCTCGGACGTGATTAACGATGAAGATGATGATGAGGAAACTACATTTTTAGAAGAGGATGATGATAGCGATGTCGATGAAGAGGAGGAAGACGATGACGAAGATGGGGCTGAGGAGGAAGACgaggatgatgatgatgatgaaaggTTGGAAGTAGAAGATTCTGATGAAGTGTCAAGCTTGAGCGATGCGGAAGAAGAGAAGCCGAAGATGAATGGATCAGCCAAGAAAAAAGAAGTTGTTAAAGAAAAAGGGAAGAAAGATAAAAAACAAGCTGTGACGCCAATGAAAACCAAAGCTGAGAAGAAGAAGGAAGGAAAGACCCCACAAATGGAAAAGACCAAGCAGAGCCCAGCTAAGACCCCAAAAGTAGAAAATGCAGCGAGCCCTCAGAAGAAAATTGTGGAGGGTGGTGTAGCAATCGAAGATCTCAGAGTTGGTAATGGAACATTTGCAAAGCCTGGCAAAATGGTGCAGGTTTATTACGAAGGTCGtttcaaaaataacaacaaaatgttCGATTCATCCACAAAAGGGAATGGATTCAGGTTCCGTCTTGGAAAGCAGGAGGTCATTAAGGGTTGGGATGTTGGTGTGGCGGGTATGAAAGTTGGAGGGAAACGTCGCATTGTCTGCCCACCCGCCATGGCATACGGAACCAGAGGATCACCACCTACTATCCCACCCAATTCGACGCTCGTGTTTGAGGTGGAGCTGAAGAATGAGGCAGTTGATCCACTGAAGATCGAAGAAGAAGAGATACAGATGAATGTAGTCGAACCGTATGCTTGCGAAGAATGCAATATTACTTACGACGGGCTTCCAAGCTATCAAGTGCATATGGAGACTGCACATGGAGGTGATTTTAAGTGCGATGGATTAAAAATAGAAGGTGATAACTATGAATCCACTGATCAAAAGCATTTGAAATGTAATGTTTGTAAGGCAAGTTTCACACAAAAAGACGATTGGAGCAGGCACAGATTGACACATGCTTCCGAGAAGCGGTACACATGTGATACGTGCAACTTAGGATTTACGTGGAAGTCCAGCTTGAATCGGCACAAACTGACCCACACCGGCGAGAAGCCGTATAAATGTGATGTCTGCAACTCGGGATTTAAACAGAAGGTCCACTTAATCGCGCATATGCCCATACACACCGGTGAGAAGCCATACAAGTGCGACGTTTGCAACTTGAGTTTTACTGGGAAGAGGAACTTGATTCGGCACGGCTTAACGCACTCCGGCAAAAAGCGGTACAAATGCGAAGGCTGTGCCTTAATATTTATGTACAAGAGCAACTTGAACGTGCACATGCTGACGCACACCGGCGAGAAGCCGTACAAGTGCGAAGTCTGCAGCCTGGTGTTTACGCGAAAGTGCGACGTGAACGCGCACAAGCGAGGGCATACCGGCGAGAAGCCGTACAAATGCGATATTTGCAGCGCAACATTTACACGGAAGTTCAGCTTGAACACGCATAAACGCAGGCATACCGGCGAGAAGCCGTACGAATGCGATGTCTGCAACTCGAGGTTTACACAGAAGTCCCACCTGAATGTGCATACTTTGACACATATTACCGAGAAGTCGTACAAATGTGAATTTTGCAGCGAGGTATTTACACGGAAGACCGATTGGACTGCGCACAAACAATTACATGCTCATAATAAACCGTATAAGTATGATAAGTGTGATTTACGGTTTACGTGCAAAACCACGTTAAAGCTGCATAAATTAGCACATTCTGACAATAGTCATGTGATTGAGGAAGATGAAAGAATATaa
- Protein Sequence
- MEPQKRYSQKVEKSFHVSMAALDINSCTDEPVQVMCGFESRKYLLCTLQKGKIFQNSLDLNFDVGDEISFVTNGTSHVHLTGYLNDDVMDDLDVEDDDDDEEEVTSDIGNISPSNIVSGKRPKIKVSAELQRKSLQQSQMPSSNFASFVFLAPAKKSKTMELLAEINSLDEDDSDDSDVNLSDVINDEDDDEETTFLEEDDDSDVDEEEEDDDEDGAEEEDEDDDDDERLEVEDSDEVSSLSDAEEEKPKMNGSAKKKEVVKEKGKKDKKQAVTPMKTKAEKKKEGKTPQMEKTKQSPAKTPKVENAASPQKKIVEGGVAIEDLRVGNGTFAKPGKMVQVYYEGRFKNNNKMFDSSTKGNGFRFRLGKQEVIKGWDVGVAGMKVGGKRRIVCPPAMAYGTRGSPPTIPPNSTLVFEVELKNEAVDPLKIEEEEIQMNVVEPYACEECNITYDGLPSYQVHMETAHGGDFKCDGLKIEGDNYESTDQKHLKCNVCKASFTQKDDWSRHRLTHASEKRYTCDTCNLGFTWKSSLNRHKLTHTGEKPYKCDVCNSGFKQKVHLIAHMPIHTGEKPYKCDVCNLSFTGKRNLIRHGLTHSGKKRYKCEGCALIFMYKSNLNVHMLTHTGEKPYKCEVCSLVFTRKCDVNAHKRGHTGEKPYKCDICSATFTRKFSLNTHKRRHTGEKPYECDVCNSRFTQKSHLNVHTLTHITEKSYKCEFCSEVFTRKTDWTAHKQLHAHNKPYKYDKCDLRFTCKTTLKLHKLAHSDNSHVIEEDERI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -