Basic Information

Insect: Othius punctulatus
Gene Symbol: -
Assembly: GCA_951805005.1
Location: OX638140.1:31896062-31898153[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.067 11 8.5 0.1 7 23 151 167 147 167 0.96

2 11 8.2e-07 0.00013 24.0 2.5 1 23 173 195 173 195 0.99

3 11 0.00014 0.023 16.9 2.6 1 23 201 223 201 223 0.93

4 11 1.6e-05 0.0025 19.9 3.2 1 23 229 251 229 251 0.97

5 11 1.1e-06 0.00018 23.6 1.1 1 23 260 282 260 282 0.98

6 11 0.0031 0.5 12.7 0.8 1 23 288 310 288 310 0.94

7 11 0.0047 0.76 12.1 0.2 1 23 316 338 316 338 0.99

8 11 4.8e-06 0.00079 21.5 0.6 1 23 344 366 344 366 0.98

9 11 0.0002 0.033 16.4 0.3 3 23 374 394 373 394 0.98

10 11 3.2e-05 0.0052 19.0 0.8 1 23 400 422 400 422 0.98

11 11 7e-07 0.00011 24.2 1.9 1 23 428 450 428 450 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.067	11	8.5	0.1	7	23	151	167	147	167	0.96
2	11	8.2e-07	0.00013	24.0	2.5	1	23	173	195	173	195	0.99
3	11	0.00014	0.023	16.9	2.6	1	23	201	223	201	223	0.93
4	11	1.6e-05	0.0025	19.9	3.2	1	23	229	251	229	251	0.97
5	11	1.1e-06	0.00018	23.6	1.1	1	23	260	282	260	282	0.98
6	11	0.0031	0.5	12.7	0.8	1	23	288	310	288	310	0.94
7	11	0.0047	0.76	12.1	0.2	1	23	316	338	316	338	0.99
8	11	4.8e-06	0.00079	21.5	0.6	1	23	344	366	344	366	0.98
9	11	0.0002	0.033	16.4	0.3	3	23	374	394	373	394	0.98
10	11	3.2e-05	0.0052	19.0	0.8	1	23	400	422	400	422	0.98
11	11	7e-07	0.00011	24.2	1.9	1	23	428	450	428	450	0.98

Sequence Information

Coding Sequence: atgaCTTTAGAACATATATGCTTGGAGATTGAAAGAGATTTATGCAGAATATGCCTAAAAAATGATGACAGTTTAAAGTGTATGTACGACTTAGTGATTTCACATGGGGACGAAGTGCCTTTGGTCGATTTTTTGAACAATATAACCAATTTGGAGTATTCAAAATCCGATGGTTACCCAGACACAATTTGCATCAAATGTATCGAATCAATAACATCAACATATGccttaataaaactttgtaccTCGTCACACGAGAAACTCAAATACATCAAGGATCACACCCGATCCCAAGAAACCGTACGCCTTGAGGTAATCAATGATCATAATTACGATGGAAATGGTGAAGATGCTGCTGAACAAGGGCAAGAAAAGGATGTCGCTACAAACGAAAAAGGAGCCACCATTAAAGAGGCAGCTTGCGATTCCAAAGTGCAATGTTCATCCAGTGGCGAGTCATTCAACACAGAGCAAAAGTTAGTCAAGCATATGAAAGTTCATGAGAAAGCAACAGAATACAAGTGCCAAACATGCTCTAAAATATTCCGTAAATTAAGCCAGTTGACGAGCCACATGAGAGTCCATGCCAAGCAAAAGCCATTCCAATGTGATATTTGTGGCAAGCACTTTGTGTATGAGTATCTACTGAAGCAGCATAGTTACCAGCACAGCGACGAGAAACCGTTTCCGTGCCCCAAATGCGATAAAGGTTGTACAACAAAACAGAGCTTACATAGGCATATGGTGGTGCACAGCGAGAACTACATGAAACCCAAGCATAAATGTGAAATCTGCGGCAAGGAGTTTCCATATCCCAGCTTCCTTACCGAACACATGAAGAACCACACGGGCGAGAAGCCGTTCCTATGCAGCATCTGTGGCAAGGGGTATCGGCAGAGCGGTGCTTTGGGCTGCCACTTGCGATCGCACATGGGAATCAAGCCGTTCAAATGTGAATTGTGTGATAATTACTTCATGTCTGCGGGTATTCTAAGAGTCCATATGAGAATTCACACCAATGAGAGACCATTTGTGTGCGACATATGTGGAATGGCTTTTAGGCAGTCAACTGATATGAAGAGCCATCGGCGCAACCATTTAGGCGAGAGGAGAGTGTTATGTTTTATCTGTGGCAAACGTCTTGCAACTACAGGTCAGTTAACGGTTCACCTTCGATCCCACACAGGAGAGAAGCCGTATAAATGCGGCACATGCTCCAAAGCGTTTGCCACGCGCACAATGTTGGTGAAGCATAACCGAATTCATACCGGAGAGCGTCCGTACTCCTGCAACGTGTGCTCCAAGTCATTTAATCAGCGCAGCACTTTAAAAACGCATCTTAACATACACAAACTGGACAACATTAAGGACAATATTCAAGAGGATAAGATTATCATTGATGAAATTGTCGACAGCAAATGCATTATTATAGATCAAGATATTGGGACGCAGTATAGCATTGAGACGGTTAAGACTAGTACCGATTTCATTAAAACCGAGATCAACGTTGACGTCTTGCCGTCACCCGTTCCGTTATTATAA
Protein Sequence: MTLEHICLEIERDLCRICLKNDDSLKCMYDLVISHGDEVPLVDFLNNITNLEYSKSDGYPDTICIKCIESITSTYALIKLCTSSHEKLKYIKDHTRSQETVRLEVINDHNYDGNGEDAAEQGQEKDVATNEKGATIKEAACDSKVQCSSSGESFNTEQKLVKHMKVHEKATEYKCQTCSKIFRKLSQLTSHMRVHAKQKPFQCDICGKHFVYEYLLKQHSYQHSDEKPFPCPKCDKGCTTKQSLHRHMVVHSENYMKPKHKCEICGKEFPYPSFLTEHMKNHTGEKPFLCSICGKGYRQSGALGCHLRSHMGIKPFKCELCDNYFMSAGILRVHMRIHTNERPFVCDICGMAFRQSTDMKSHRRNHLGERRVLCFICGKRLATTGQLTVHLRSHTGEKPYKCGTCSKAFATRTMLVKHNRIHTGERPYSCNVCSKSFNQRSTLKTHLNIHKLDNIKDNIQEDKIIIDEIVDSKCIIIDQDIGTQYSIETVKTSTDFIKTEINVDVLPSPVPLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -