Basic Information

Insect: Othius punctulatus
Gene Symbol: -
Assembly: GCA_951805005.1
Location: OX638140.1:44655456-44664649[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.4e-05 0.0023 20.1 1.6 2 23 198 219 198 219 0.97

2 11 2.7e-06 0.00044 22.3 1.2 1 23 225 247 225 247 0.99

3 11 0.00041 0.066 15.5 6.0 1 23 255 277 255 277 0.97

4 11 0.0012 0.19 14.0 1.5 1 23 283 305 283 305 0.98

5 11 0.018 2.9 10.3 0.1 1 23 317 339 317 339 0.96

6 11 2.3e-06 0.00037 22.6 3.1 1 23 345 367 345 367 0.96

7 11 2.2e-05 0.0036 19.5 0.5 1 23 373 395 373 395 0.99

8 11 1.2e-06 0.00019 23.5 0.6 1 23 401 423 401 423 0.98

9 11 7.7e-05 0.013 17.8 1.5 2 23 430 451 429 451 0.97

10 11 1.9e-05 0.0031 19.7 0.1 1 23 457 479 457 479 0.99

11 11 8.1e-08 1.3e-05 27.1 0.5 1 23 485 507 485 507 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.4e-05	0.0023	20.1	1.6	2	23	198	219	198	219	0.97
2	11	2.7e-06	0.00044	22.3	1.2	1	23	225	247	225	247	0.99
3	11	0.00041	0.066	15.5	6.0	1	23	255	277	255	277	0.97
4	11	0.0012	0.19	14.0	1.5	1	23	283	305	283	305	0.98
5	11	0.018	2.9	10.3	0.1	1	23	317	339	317	339	0.96
6	11	2.3e-06	0.00037	22.6	3.1	1	23	345	367	345	367	0.96
7	11	2.2e-05	0.0036	19.5	0.5	1	23	373	395	373	395	0.99
8	11	1.2e-06	0.00019	23.5	0.6	1	23	401	423	401	423	0.98
9	11	7.7e-05	0.013	17.8	1.5	2	23	430	451	429	451	0.97
10	11	1.9e-05	0.0031	19.7	0.1	1	23	457	479	457	479	0.99
11	11	8.1e-08	1.3e-05	27.1	0.5	1	23	485	507	485	507	0.98

Sequence Information

Coding Sequence: ATGGAGATCAAGACTGACCCAAACGCCTTCGACATCAGCAAGATATGTCGGGCCTGCCTGACCGAGAAGGAGGACATGAGGTGCGTCTTCGTGCCCGACGAGTCCCTGGGCCAGGCGATGCGGCTAGCCGAGATCCTGATGGGATTCACCACCGTACAGATCGAGACCGGCGACGGTCTACCGACCCTCCTGTGTCTCCAGTGCGCCCACCAAGCCAGCCAGTGCTTGTCCTTCAAGCAGCTCTGCGAGCAGTCGGATGTGAACCTCAGGCAGTACCTGGGCAAGCCGATGGCCCGCAAACCCTGCAAAGAGGAGGCCCAGAGCAAGGACCTGTATTCGAGCGCCCTCCTGCTCGACAACTTCGGCCTGGATGACTCCTCGGATGACAGCAACGACGAGGACGACTTCAAGATTACCGAGTACGACATTCTCGACGTGAAGGCGATCGACGCCAACGACGAGAAGATCATAGCCCAGCGTCAACTGCTCAAGGCGGCCAAAATGCACAAGAGCAAGTCGTCAAAGAAAAAGTTGCTGGCAGCGAAGGCCGGCGGGAAGATGAACGCGAAGAAGCTTAAACGGAACACGAACGTGTGCAACGTGTGCAAGAAGCCTTTCATCAACCTGAAATCGTTCAGGAAGCACCTCCGGACGCACATCGAAGATCGGCCATACAAGTGCAAGCTGTGCCCGCGTGGCTTCACCGAGGAGAACTATCTGAACAACCACATGCGCACACATATCCCCGAGGAGCAGAAACCGCATGAGTGCAAGATCTGCAAGAAGCGGTTCATACACACGACGCTGCTCAACAAGCACTTGCTCAAGCACTCGGGGGAAAAGCCGTTTGTCTGCAAGGTGTGCAACAAGGGGTGCTATGCAGAGAACAGCCTGCTCAAGCACATGAAGATACATGAGAAGAAGGAGGGCGATCCGGGGCTGCTGAAGCACATCTGCGACTACTGTAAGAGTGAGTTTCCCGACGCCGAGGTACTCGCTGTGCACATAAAGCAGCACACCGGGGACAGACCCTTTCTCTGCAACACCTGCGGCAAGTGCTTCCCGCAGAGATTTAACCTAGAGCTCCATCTCCGAACGCACACAGGTGAGAGGCCGTTTACCTGTGAGGTCTGCAAAAACGGCTACGTCTCGAAGGCGAGCCTGAAAATCCACATGCGCACACACACGAATGAGCGGCCATTTGTCTGCGACTTTTGCGGCAAGGCGTTTAGGCAGTCAGGAGATCTGACGAGCCACAAGAGACTGCATGGCACAGAAAAGCCGATTGAGTGTTCAGTGTGTCAAAAGAGGTTTACGACTGTGATGAAGTTAAAGTAccacatgagaaatcatacagGGGAACGACCTTACGTCTGCAACATCTGCGGTCGTGGCTTTACAGTCAACACGATTCTCCTGAGGCACATGCGAGTGCATTCTGGCGAGAGGCCTTATGTGTGCGTCACATGCGGAAAGGCGTTTTCACAATCAAGTACATTGAATACACACATGAAGGTTCATGCATCTTCTCCGAAATATCAAGTAGTTGAAATTCAGCAGCAGCCGTCTCAGCCTCCTCCTCAgcagcagcaacagcagcagcagcagcactGCATACCAAAGTTCCACCAGCAGCCAGACGTCAAGTACCACCCGCAACAGGACCAGGGCCGGTTGATGCAGGACAACAGAATGCAGATGCAGCCGGAGGAGTCACGGATGATGCAGCAGGACAACCAGCGGATGATCTCAAACGATGGCTCGAGGATTCTGAACGACGGCACGAGACTGATCGCTGACACCTCCCACATGCTGAACGTGACCGATAACAGACTGAACGAGTACAAGCTCAACGACAACACCAAGTTCCTGAATGACAACAGGAACCTGCTGACGAACGACAACACACGGTTGCTGGTGAACGTCACGGAGCCCCCACGGTTGCTGGTCAACGATACGAGGCTCCTCACCAACGACAACAGGCTGCTGACGAACGTGAACGATGGCGGCCGACTGCTGGGCAACGTCAACGACAACACGAGGCACCTGGCGGTGACCGTCGAGAACCGGATACTGGCCGATAAATACCTGTCCAACTACGATCCATATCACCGTGGGCATTTATAA
Protein Sequence: MEIKTDPNAFDISKICRACLTEKEDMRCVFVPDESLGQAMRLAEILMGFTTVQIETGDGLPTLLCLQCAHQASQCLSFKQLCEQSDVNLRQYLGKPMARKPCKEEAQSKDLYSSALLLDNFGLDDSSDDSNDEDDFKITEYDILDVKAIDANDEKIIAQRQLLKAAKMHKSKSSKKKLLAAKAGGKMNAKKLKRNTNVCNVCKKPFINLKSFRKHLRTHIEDRPYKCKLCPRGFTEENYLNNHMRTHIPEEQKPHECKICKKRFIHTTLLNKHLLKHSGEKPFVCKVCNKGCYAENSLLKHMKIHEKKEGDPGLLKHICDYCKSEFPDAEVLAVHIKQHTGDRPFLCNTCGKCFPQRFNLELHLRTHTGERPFTCEVCKNGYVSKASLKIHMRTHTNERPFVCDFCGKAFRQSGDLTSHKRLHGTEKPIECSVCQKRFTTVMKLKYHMRNHTGERPYVCNICGRGFTVNTILLRHMRVHSGERPYVCVTCGKAFSQSSTLNTHMKVHASSPKYQVVEIQQQPSQPPPQQQQQQQQQHCIPKFHQQPDVKYHPQQDQGRLMQDNRMQMQPEESRMMQQDNQRMISNDGSRILNDGTRLIADTSHMLNVTDNRLNEYKLNDNTKFLNDNRNLLTNDNTRLLVNVTEPPRLLVNDTRLLTNDNRLLTNVNDGGRLLGNVNDNTRHLAVTVENRILADKYLSNYDPYHRGHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -