Basic Information

Gene Symbol
-
Assembly
GCA_951805005.1
Location
OX638138.1:122035811-122040802[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 3.6e-10 1.3e-06 30.3 0.0 1 39 302 342 302 349 0.87
2 5 3.3e-09 1.1e-05 27.2 0.0 3 44 357 402 355 404 0.89
3 5 1.1e-13 3.9e-10 41.5 0.0 2 46 412 456 411 456 0.98
4 5 1.5e-09 5.1e-06 28.3 0.5 2 43 464 505 464 508 0.94
5 5 3.2 1.1e+04 -1.6 0.0 29 44 699 714 697 715 0.85

Sequence Information

Coding Sequence
ATGGACGTTGATGAAGATCTTGAGGATATAAAGAGGTTAAACGATATAATTAATGCTGAAAATTCAGCAAAAGAGGACAGTTCATATTTTGGATTTCAAGAGAGTGACTCCAGCGAGGCTGACGAAAGTGATTGTGATGAATCGAATGAAGATATCGTCCTCAGTACCGATGCTACAATAATCGATATTCCAGAACAATTAGATACCAGTTTTTCAGATGCTTTGGAAACAAACAGATTGACGGATTTTGCGTATCTAACTCCACATCTTACATATGAAGAATTTGATATTATCACAAAATGTAAAGACTCCGACTTAAAGAAGTTACTCATTTTAAATCGTGTAAAGAAGCTGCAGCTTAAACAATTGAACCAAAAGTACTACAGTTTACTGATGCAatgcaatacaaatttaaaatatgaaaatgacaTAAAGCACAGGAAAATTGAAATgtctaataaaaacaataatcacAGTATTGTGGGAGCCCCATATTTTAGAGATGAAAAGTTATTTCCTTGTCCCCCAAATGCTGATATAATAAAGAAAAGGAAAAATGGCGAGATCAACATTCATTATTTGCCCAAAAGGAAAGTGTGGAATATTTGCACACAAATCAATATAAAGTCGAAAATTATGACCAATTACTTTTCCAACATCCTGAATGGTTATGAGAAAGAACTTAGAAACACTCCGAAAAGTAAAGAAAACCAGCAAGTAAGGTTTCAACTGGCAAGAAAAATTGAAGACTGGAAGACTAGTTATGACAGTTTGGAACCTCCAAAATTCTGGGACGACACATGTATAGATTGGGATACAGTGGCCGAGCAACACTTTGATGatGTTGGTATGTCATTTGCGTGCAGGGCCTTTTGGAACTTATTTCTTCACCCATCCATAAACAAAAGCCCATTTTCAACAGAAGAGATTCAAAAAGTGTATGAGTTggtagaaaaatacaaattccaAAATTGGGAAGCGATCGCGGAAGAGTTGAACAACAATCGTTCACCGTATTTAGTATGTGTGtattatttgaacaaattaGTGAATATGAACATTACTAGTCGATTCTCTGAAGATGAAGATAATTTCTTATTGGATCTTGTTGCAAGCAATCGTTTGGGTAACCGTATTATGTGGTCTAAAATAGCATATTTCATGAAAGACCGTTCAAGAAGGCAGGTATACCAACGATATAGGTACATGCATTcaaatacaatgaaaaaaatGGGGAAGTTTAGTGAGTCTGAAGACATGTTATTACTTTGCTTGGTGCAGAAGTTTGGCAAAGATTTTGACAAGATTGCAGAGGAAATGCCACATCGaaagaaaatacaattgaaatcCCGCTATCATGAGTATTTAAAGCATAATGAATTAAACTACGGTAATTGGACTCTGGAAGAGGATAAAATAATACTAGcccacacaaaaaaatatggtcCCAAGCAATGGGTTTTATTAACTCAAAAAATGAAACGTACGACAGCACATATTCGTCATCGGCATAATGTATTGAAGAGTAAATTAGAAACAAATCCTGAAATGTCGTTAGATGACTTGCCCCGGCGGATTCATGTAAAGTTAAGTAGAAAGAATGAAGTAAATCGGTCAATAAATTGTGTTGATCATTATTTAAGCACTAATACTTTGCCCAAATTGGAACCATACATATCTCCTGTAATTGTAGGGGGAAATATAGGTCGTCCAACACGTACTTTAGTTGATTTGCAGTTGATAAACTTTTTTCGACCAACTGCACACATAAGAAAGGAAAGGCTTAAAAAATCAATCACCGAAGAGAGCTTACAAAAGAGTGCACAGTCTGTCCAAATGATTCTAGATTTATTAGGTGTAGAATTAAACATTCCAAAACCAGATGAGATGGAAAATTATCACCTGGATAAAATTGACAAGGAAGTGTTGACCATAATGTCGCTGCACAACAAACACAAATCAGTTCAATCTTTTCTTCCGAGCCTATCATCTCCAGATGTGACTGACGAAATTCCACCAAATGTAAATACAATTCAAGCTCTAAGGTGCTTACTTCTGCATTACCACGCCCATCGTAACTCTAGAAAATCTATGAAAGTCCCTTCAACAACAGATGATGATGTTAAAGAgcacataaataattttgaagctCGGTTCAGAGCATTATTTAGATGGCCATGCCTAATGTCCATTATTGATCCACCTGAACTACCTTTGGTCCAGGATGATGAAGCCAAATACATGGCCCTAATGACAAAAAAGGTTGGCAGACCCAagaaaaattacagtaaaatcCTTTCTATGAATGCGGCACGGAAAAAGAAATCGAAAATTGTTTCTACAGGATCTTCCACAAATATCAACACAGACTTGCCAATCGTATCTGCAATGCCAgtaaagaatataataagtgCAGAAGAATTTAACGATTTAGTAAGACAGCCAGGAGGAAACCAAACAACCAGAATACTTGTGAAACTTGACAAAGCTGCTATAGAGAAAATGCAACAACAAAAGAGGAAAATTATAGTGCTCAAGAGTGTGCCGACAAAACAAGCACTAAAACGGTTAAAAGAAACTCCACAGCAGTCAACTTCAAAGAAGATTAAATTGTTGTAA
Protein Sequence
MDVDEDLEDIKRLNDIINAENSAKEDSSYFGFQESDSSEADESDCDESNEDIVLSTDATIIDIPEQLDTSFSDALETNRLTDFAYLTPHLTYEEFDIITKCKDSDLKKLLILNRVKKLQLKQLNQKYYSLLMQCNTNLKYENDIKHRKIEMSNKNNNHSIVGAPYFRDEKLFPCPPNADIIKKRKNGEINIHYLPKRKVWNICTQINIKSKIMTNYFSNILNGYEKELRNTPKSKENQQVRFQLARKIEDWKTSYDSLEPPKFWDDTCIDWDTVAEQHFDDVGMSFACRAFWNLFLHPSINKSPFSTEEIQKVYELVEKYKFQNWEAIAEELNNNRSPYLVCVYYLNKLVNMNITSRFSEDEDNFLLDLVASNRLGNRIMWSKIAYFMKDRSRRQVYQRYRYMHSNTMKKMGKFSESEDMLLLCLVQKFGKDFDKIAEEMPHRKKIQLKSRYHEYLKHNELNYGNWTLEEDKIILAHTKKYGPKQWVLLTQKMKRTTAHIRHRHNVLKSKLETNPEMSLDDLPRRIHVKLSRKNEVNRSINCVDHYLSTNTLPKLEPYISPVIVGGNIGRPTRTLVDLQLINFFRPTAHIRKERLKKSITEESLQKSAQSVQMILDLLGVELNIPKPDEMENYHLDKIDKEVLTIMSLHNKHKSVQSFLPSLSSPDVTDEIPPNVNTIQALRCLLLHYHAHRNSRKSMKVPSTTDDDVKEHINNFEARFRALFRWPCLMSIIDPPELPLVQDDEAKYMALMTKKVGRPKKNYSKILSMNAARKKKSKIVSTGSSTNINTDLPIVSAMPVKNIISAEEFNDLVRQPGGNQTTRILVKLDKAAIEKMQQQKRKIIVLKSVPTKQALKRLKETPQQSTSKKIKLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-