Opun022768.1
Basic Information
- Insect
- Othius punctulatus
- Gene Symbol
- -
- Assembly
- GCA_951805005.1
- Location
- OX638140.1:71530334-71531173[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-09 2.8e-06 28.7 0.0 5 39 22 56 18 59 0.86
Sequence Information
- Coding Sequence
- ATGCCAAGAGTGTATAGAAGAAAACTAGGCTCTCGGggttatcaaaattatacccaACAAACTTTGCAACAATGTTTAGAAGCAGTTAGAAGTAAACGAATGACTCAGAGAAAAGCCGCACAAGAGTTTAAAATTCCGCGGCGAactatcattaataaacttaaaggCAATCTACTTGAAAAGCCTGGAAGATCCAAGATATTTTCCGAGGAAGAAGAAACTGGATTTGTAAACTGTATATTAGCCTCCAACACATTTGGTTTCCCACTAGACTCTTTTGATTTGCGCATGATCGTGAGATCATTCTTGAGCCGAGTTGGTAGAATTGTgagaacatttcaaaacaatatacctgGTCATGAGTGGGTcttcaattttctgaaacgcCATCCAGAGCTCACTGTACGATTTGCTAGTAATATAAAACGCAGTAGAGCatctataaatgctgaaatattaacgGATTACATCTCAAGTTTGGGGGAAGTTGTGAAAGACGTGCCACCAGAGAACATTTGGAACTGTGATGAGTCGAATCTGACAGATAACCCTGGCCAAAAAAAGGTGATAACCAAACGTGGTTGTAAATATCCTGAAAAGATTCGTAATTCATCCAAAACTAGCATTTCTATTATGATTGCTGGCAGTGCTGCCGGAGAACTCTTGCCTccatatgtagtttacaaatcttCTTGCATGTGGACAACCTGGACCGAGAATGGGCCCAAAGGCTGCCGTTATAGCAATCGTGCAAGTGGCTGGTTCGATGCCAATAGCTTTTCAGACTGGTTTGAAAGCCTaatgttaaaagttaaaaaaatcaaggcaagaaagttttaa
- Protein Sequence
- MPRVYRRKLGSRGYQNYTQQTLQQCLEAVRSKRMTQRKAAQEFKIPRRTIINKLKGNLLEKPGRSKIFSEEEETGFVNCILASNTFGFPLDSFDLRMIVRSFLSRVGRIVRTFQNNIPGHEWVFNFLKRHPELTVRFASNIKRSRASINAEILTDYISSLGEVVKDVPPENIWNCDESNLTDNPGQKKVITKRGCKYPEKIRNSSKTSISIMIAGSAAGELLPPYVVYKSSCMWTTWTENGPKGCRYSNRASGWFDANSFSDWFESLMLKVKKIKARKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01126310;
- 90% Identity
- iTF_01126309;
- 80% Identity
- -