Opun007920.1
Basic Information
- Insect
- Othius punctulatus
- Gene Symbol
- -
- Assembly
- GCA_951805005.1
- Location
- OX638138.1:110013754-110014272[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-10 6.1e-07 30.9 0.0 3 39 20 56 18 60 0.88
Sequence Information
- Coding Sequence
- ATGCCAAGagtgtataaaaaaaaactaggctCTCGggcttatcaaaattataccctAGAAACTTTGCAACAATGTTTAGAAGCAGTTAGAAGTAAACGAATGACGCAGAGAAAAGCCGCACAAGAGTTTAAAATTCCGCGGCGAactatcattaataaacttaaaggCAATCTACTTGAAAAGCCTGAAAGATCTACGATATTTTCCGAGCAAGAAGAAACTGGATTTGTAAACTGTATATTAGCCTTCAGCACATTAGGTTTCCCACTAGACTCTTTTGATTTGCGCATGATGGTGAAATCATTCTTGAGCCGAGTTGGTAGAATTGTgagaacatttcaaaacaatatacctgGTCATGAGTGggtcttaaattttctgaaacgccATCCAGAGCTCACTATACGATTTGCTGGTAATATAAAACGCAGTAGAGCatctataaatgctgaaatattaacgGATTACATCTCAAATTTGGGGGAAGTTGTGAAAGACGTGCCACCAGAGAACATTTAG
- Protein Sequence
- MPRVYKKKLGSRAYQNYTLETLQQCLEAVRSKRMTQRKAAQEFKIPRRTIINKLKGNLLEKPERSTIFSEQEETGFVNCILAFSTLGFPLDSFDLRMMVKSFLSRVGRIVRTFQNNIPGHEWVLNFLKRHPELTIRFAGNIKRSRASINAEILTDYISNLGEVVKDVPPENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01126291; iTF_01126311; iTF_01126312; iTF_01126281; iTF_01126307; iTF_01126283; iTF_01126278;
- 90% Identity
- iTF_01126281;
- 80% Identity
- -