Onub006727.1
Basic Information
- Insect
- Ostrinia nubilalis
- Gene Symbol
- GATA-B
- Assembly
- GCA_963855985.1
- Location
- OY979736.1:18743480-18752621[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.32 1.3e+03 0.1 0.4 10 18 19 27 18 29 0.81 2 3 7.4e-16 2.9e-12 46.9 7.8 1 34 172 204 172 206 0.97 3 3 3.7e-19 1.5e-15 57.5 7.2 1 35 241 274 241 275 0.97
Sequence Information
- Coding Sequence
- ATGGCCATATCTGTCAAACTGGGTGTTTCTGAATATCACGCGGTTCTAATCGGTCCTTCCTGGCGcagaggcggcggcggcggcggcggcgcggtgtaCTCGCGCTGCGCGTACCCCAGCCCCGCGCCCTACTTCGGCGCGCCCGCCGAGCTCGCCGTGCAGCAGCAGATCTGGAGCCCCAGCACAGCCGGCGGTTCTCCCACGTACGGCgggtcgagcggcggcggcggcggcggcggcggcggcgtggtgCTGGGCGAGGAGTACGCGGGCGAGGCGGGCGGCGGcgaggcggcgggcggcgcgctgcCGGCCTTCAGCGCGCGCTTCGGCGGCGCCTTCGCCTGCGCCACCTCGCGCGCCTCCACCGTGTACGGCAACCCCGGCCTCACCGCCAATGCTTACACGCACCAGGACGTGTGGGGCCTGGACGGCAGCCGCCGGCCGCAGCTCTCGGCCGCCGCCAGTCTGTCAGCCATCGATATGGCGGAGTTTTTCACGGAGGGCCGCGAGTGCGTGAACTGTGGCACGGTGCACACGCCGCTGTGGCGCCGCGACTGCACCGGCCACTACCTATGCAACGCGTGCGGGCTCTACAACAAGATGAACGGCATGAACCGCCCGCTCAAGCAGCCGCGGCGGCTGGTACGTCACCGCACCGCCGCGCACGCGCTCGCCGCGCCCGCCCACGACACGGGCACGAAGCGGCCGGGCACGACGTGCACCAACTGCCACACGACCACGACGTCGCTGTGGCGCCGCAACGCGCACGGCGAGACCGTCTGCAACGCCTGCGGGCTCTACTACAAGCTGCACAGCGTCAACCGCCCGCTGGCCATGAAGAAGGACGCCATACAGacGAGAAAACGGAAACCAAAGAACGGAATTAATAAAAATGAACGAAATATTAAGACCGCAGTACAGCGAACGCTGTCAAGTGGCGTGAAGTTGGAGAGTATACTGGAGCCGGCGCCGGCGCTGGGCGGGGGCGCGCGCTCGCCGCTGCCCGTGAGCTACTACGTGCAGCACGCCTTCAAGCTGGAGGAGCCGCCGCCGGCGCACGCGCTGGACGACTACCGCCGCGCGCCCGACGACCGCCCCAGCGTCGTGTCCATGGGCAGCTGA
- Protein Sequence
- MAISVKLGVSEYHAVLIGPSWRRGGGGGGGAVYSRCAYPSPAPYFGAPAELAVQQQIWSPSTAGGSPTYGGSSGGGGGGGGGVVLGEEYAGEAGGGEAAGGALPAFSARFGGAFACATSRASTVYGNPGLTANAYTHQDVWGLDGSRRPQLSAAASLSAIDMAEFFTEGRECVNCGTVHTPLWRRDCTGHYLCNACGLYNKMNGMNRPLKQPRRLVRHRTAAHALAAPAHDTGTKRPGTTCTNCHTTTTSLWRRNAHGETVCNACGLYYKLHSVNRPLAMKKDAIQTRKRKPKNGINKNERNIKTAVQRTLSSGVKLESILEPAPALGGGARSPLPVSYYVQHAFKLEEPPPAHALDDYRRAPDDRPSVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01280966;
- 90% Identity
- iTF_01125103;
- 80% Identity
- -