Onub029293.1
Basic Information
- Insect
- Ostrinia nubilalis
- Gene Symbol
- ZNF526_1
- Assembly
- GCA_963855985.1
- Location
- OY979761.1:2499081-2529250[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.97 87 4.8 0.1 2 23 531 552 530 552 0.90 2 18 0.00096 0.086 14.3 0.0 1 23 562 585 562 585 0.95 3 18 4.6 4.2e+02 2.7 7.0 1 21 707 727 707 728 0.93 4 18 0.048 4.3 8.9 3.8 2 23 792 813 791 813 0.95 5 18 9.3e-05 0.0083 17.5 0.2 2 23 855 878 854 878 0.97 6 18 0.095 8.5 8.0 0.2 1 23 884 906 884 906 0.93 7 18 0.0029 0.26 12.7 3.3 1 23 912 934 912 934 0.98 8 18 3.1 2.8e+02 3.2 0.0 2 20 945 963 944 965 0.90 9 18 0.076 6.9 8.3 0.1 1 23 1040 1062 1040 1062 0.97 10 18 2 1.8e+02 3.8 6.3 1 23 1069 1091 1069 1091 0.95 11 18 0.0019 0.17 13.3 1.8 1 23 1132 1155 1132 1155 0.95 12 18 7.2e-05 0.0065 17.8 2.1 1 23 1161 1184 1161 1184 0.98 13 18 0.0052 0.47 12.0 0.2 2 23 1206 1228 1205 1228 0.96 14 18 0.12 11 7.6 0.1 3 23 1246 1266 1246 1266 0.96 15 18 0.19 17 7.0 0.5 3 20 1277 1294 1276 1296 0.93 16 18 0.017 1.5 10.4 0.4 1 23 1304 1326 1304 1326 0.96 17 18 0.00032 0.029 15.8 0.1 1 23 1332 1354 1332 1354 0.97 18 18 0.001 0.089 14.2 0.6 3 23 1362 1383 1360 1383 0.94
Sequence Information
- Coding Sequence
- ATGGCGCAGACTCAGCCACCGTTGATAGTCTGCATGGAGAATGTGAGCGGAGAAGAAGTGGCCTTGAGAATTGAACCTACTGATGACTTCCAGTCTTTCCTGGTCAAAGCAAAATCGACTCTCGGTTTTGAAGTTGACATAAATTCCGTGACCCGAAATCAGCCAGTTTCCCTAAACGACAACATCTATCAGTTCCTCATGAGCACCGAAAACAATTTAGACTCCCAAGTCATGTCCCAACAAAGTTACGACCAAGTATTATCCCAAACATTCGACCAATCTTTGCCCCAATCATTTGATCAAACTTTGCCCCAACCTTTTGACCAAGCACTGCCCTCTCAGAGCTTTGACCAAATGTTGGAACCAAGCAATGACCCAAACGATCTTGAGTACGAACTTGATGATGGCACTCAAATCCGAGCGTCTCAAATACACTTTGACAACGAAGACCCACACGTAGATCTATCAGCAGAGAAGATTCCGTTCATCAAATACACTGATGACGTCGACGAATTTGACCTGGAAAATGTTGGGGACGAAGAAACTAGGAAGTTTAATATAGTCGAAAGCCCAGTTTCCAGATGGTCCAGCAGAGAAGGCAGCCCTAGACGTAGTTTCGTCAATACGTTGCCTTTTAAACTCGTTTGCAACAACACTTCCGTCTTCGAAGCTCAGTTTACAAAGTATTTGGAGTCCAGCACAGCTAAAACATATACCACTTTGAACCCTGTTACTAATAGGAATAAGTCTCCACGAAGCTTGATAAGGGACAACTATAAAAACTATGACGACAAATTCAAAGGAGATGATTTTACTGGGTACACTAGGGAAGAAATACTCAATATGTTCAAAGATTCTCCAGTTGCTTCTTTGCCTTATGAAGGCCAGAATCTAAACGAGAAGAGGCGGCACGTACGCAAAACTGATCCTTCCCGGTCAGTCCATAAGAACTGGAATTCTAAACCTGTTAACTACGACGATGGGATCTTAATTGGAGACGCGGAGAACCAGAATTGTATTATTTGTGGTAAATTCGTTGAGAATAAAATCGAGAAACTTTATGTATTCGATAAAGAAGACCAAAAACGACACCGGGCGTCTCCCCAAAAAAGGACTTCTAGTCACTTAAAGATAATTTGTGAGGGATGCTTAGAAGAAAATTTCAAACCAAGTCGCATGAAGGGCCCAAACCAATCATTGGGCCCTGACGAATACCTGGTGATACGAAACAATCAGCAGTACATATTCCAGAAGACGAAAAAGATTGACTTCAAAACTAATTTCAACGCAGATTTAATAAACGATAAAGAAATGAATAAGAAGAAAGAGAACGAAAAAGTAgagtttgtcaaagttgaaattGGGTCTGATGGGGAAATAGTAACTAAACCTATAGACAATGATCCCAGGTGTACAGACGATGTTGTTATCGTTAAAGATGAGGATAACGATGAAAGCTCtagcgatgtggaaatcatagAGCCTGCGGATATAGATGAGAACATCATAGACAATTTGGAAGACGCAGATGAAGATGTTAAGGAGTTTTTGGGGAAATATCAAGCTGATAATAATACGGAAACTGAATTGAAATGCAGGTTTTGCGAAAAGATCTTCGCTGAGCTATCAGAAGTCATGGATCACGGGGAAGAACATAAGCACGATTTGGAAGACGGGGCGGTCTACCCCTGCCCTCTCTGTGATTACGGATATTCAAATGCAAAATGGCTAAAAGGTCATTTGAAGGCGGCCCATGAGAAGAAAGAAGTTCAGAAACCTATGGACATTGAGGAGACGATCAAAAAAGAAGATGGAAAGTCAAAACCAGCGTCTCCCATCGCCAGAAGGACTCGAAGTTCTTGCAAGAGAACGGAGAACGACGGTAGTAAagAGAGTCCTGTACCACCATTAGACAACGTGGGCAAGTTACTCAGCAACGCTGAATCGGCGGATTCAACCTTACTGATCAAAACAGAGGTGAAGCAAGAAGCCCTGGCCAGCAGCGATGATGAGATCTGGATAGTTCAGACCGGTGATGATGATGCTACCAAACAGTTGGAGAGCCTGTTCAATGCGGCGAAGGGCCACCAGAAACAAGAGACTTGTCCAAAGACTATTCACAAATGCTTCAACTGTAGTCGAATCTTCACATCAGAAGAGTGCCTATCCTCCCATAAGTGTAGAATCCCTCGTCGTGGCAGAAAGAGAAAGTCCGAGAGTAAAGAGGACAGCGCTATCTGCGTGCCCACTAAGGAGGATTTCTTAAAGAGAGCTCAAGGCCGACCTAGGGTAGTAACGCCTGATAACGACTTGCTAGTTGTGAGACCACGCCGCAGGAAGAATAAAGAACCGACATCTGATCCCCAAATAGTGACGTGCCATAACTGCAACGAATCTTTCACTTCTAAAGTACGGCTGAAGTTTCACATGCAGTTCCACGAGACCCCCACCCCAGCCGGTCAATCCCGATATTCCTGCGCGGCGTGCGGCGAGCAGCAGTTCGCGACGGAGACGGCGCTGTTCGACCACGTGCACTTCCAGCACCACCGGCGCCGGCGCTGGCGCTGCCCCGTCGCGGGCTGCGGGAAGAGCTTCTACCTCAGAGCAACACTGACGAAGCACAGTCGCACTCACACGGATACTCGGCGCTATGTGTGTGTGACTTGCGGAAAAAGGTTCTTGGATAAGCAGACTTTGGATGAGCATGGTGTCACTCATTTACAGATCAAACCATTCCAATGCCACATCTGCCTGAAGCAGCTGACTCGGCGCTCGCGTCTCCGAATGCACCTACGAGCCCATGAGGAGGAGCTTACTCCTACCTTGGTGCTGGTGTGTGCCGCGTGCCGACGTGCCTTTCGCGGACAGTCGGACGCTCAGGAACATATTGCGAATTCCCCAGAGTGCATGGAAGGGTTTGTCAAAGAGCTGAAGCAAGAAGCAGATGAAGCGACCGCCCAACTTTCACCCACCAGTGGGCTTGTTAAAGTTATAGAGTCCCCTCCGCCGCCGGCCGTGGTCCCGCGGCAGGTGTCAAACGCGCTAGCGGCGCCATTGCTTGCCGGATTGACGGACGAAGCGCGAAGCGTCATGCGTGTTGTGGAGATTGAAAAGGCATTCCGCTGCGAATACTGCGAGGATGTGTTTTATTTGGAAGACGCTCTCAACTCTCACCGCGCGATACACAAGGGCGTGAAGAATCCATTCGTTTGCCACATATGCAAAGTCAGCTTCGCCACTTATTCCAGATGCACAACCCACAAAACTACCCACGGTTTCTACAAGCGTTCCCTAGCTGAAGCCAAGAAGAACGCTTCCAAGCCCAGCGAGCCAGAAGCAGGCCCTTCAGCCACCGGTATACTGGGATATGGAGGGTTTCCAGTCGTCAAGCACTTCCTTTGTGAGGATTGCGGGAGATCCTACCTGCATTGGACGTATCTACAAGTACACAGGAGGATGAAACACGCCAACGACTTCTTGTATAAATGTAACCACTGCGATCTGACCTTTCCTAacagttggAGCCTGGCATACCACAGGAAGAAAATCCACGGACAAACGGGACAAGGTGATGCCAATTCTACGACCAAAATACCCAGAGAAGATTACAGGATACCTTGTCGTGATTGCGATGAGGTGCTGCCAAACAAAACTGCACTTTATAAACACAGGAAGAAGGAACACAGTGACATGACCTCGTCACTGGCTGCCAATAATGAACCAACTACTGTATGGTGTGGCGCGTGCGGTGCGCAGTTTAATTCGCGCGTAGCTTTGGACGCGCACACTCGCTCCCACACTAACACAGCCGTCGCTTCTGTGGCCTCTTGCGCTAAGTGCGGAGACAGTTTCGCGCACATCTCTGACCTGCACAAACATGTTGATAGCGCACAGTGTCGGCGGCGCGCGCACGCGTGCCCGGTGTGCGCCCGATCGTTCCGCAGCGCGTCGGTGCGCGACGAGCATCTACGAACGCACACGGGCGAGCGGCCTTTCCCTTGCGATGTTTGCGGGCTGGCTTTTAGGCGATTAACAGCGATGCGTAACCACCGGCTCATCCACACGGGTGTACGTGCGTGGGCATGTGAAAGATGTCCCAAGAGGTTCCGTATACGATCCGATCTACGCACGCATGCACGGCTGAAGCATCCCGCTCACTTGGCCGTTATTGAAaTACGAGGCCTCAACCCGACTCCGGACGAAGTGATGGAGTATTTAAACGCGAATAATATTTCGCATACAAAAGTCATCGAGATCACCAAAATGTCTTTCGCAAAGGGCACGTCAAGTATAATCCCAAACTGCGCGCGAGCGTTGTCTATGCTAGGAAGCGTTCCGCGTACACAGGTCACTTACAGCAAACCAGTCATTGATGATTCAGATTTCCAACTCCCCCGCCGCGGTCGCGGTATAGCCAAGAACCCGCGCCGGCCGAAGATCCTGCAGAGGGGGGGTGACGATGTACCCCAGCCCCCCCAGGAAATGTTTCCGGTCACCCTGAACGTTACTGGTGGGGAACTGACGGATATGGACGTCCAACTCCTCCTACGCGATGGGGTTCTGGTCAATGGGAACCAAATGGTGCAGTTGCAACTCGACGATAACATGCTACTGGAGTAA
- Protein Sequence
- MAQTQPPLIVCMENVSGEEVALRIEPTDDFQSFLVKAKSTLGFEVDINSVTRNQPVSLNDNIYQFLMSTENNLDSQVMSQQSYDQVLSQTFDQSLPQSFDQTLPQPFDQALPSQSFDQMLEPSNDPNDLEYELDDGTQIRASQIHFDNEDPHVDLSAEKIPFIKYTDDVDEFDLENVGDEETRKFNIVESPVSRWSSREGSPRRSFVNTLPFKLVCNNTSVFEAQFTKYLESSTAKTYTTLNPVTNRNKSPRSLIRDNYKNYDDKFKGDDFTGYTREEILNMFKDSPVASLPYEGQNLNEKRRHVRKTDPSRSVHKNWNSKPVNYDDGILIGDAENQNCIICGKFVENKIEKLYVFDKEDQKRHRASPQKRTSSHLKIICEGCLEENFKPSRMKGPNQSLGPDEYLVIRNNQQYIFQKTKKIDFKTNFNADLINDKEMNKKKENEKVEFVKVEIGSDGEIVTKPIDNDPRCTDDVVIVKDEDNDESSSDVEIIEPADIDENIIDNLEDADEDVKEFLGKYQADNNTETELKCRFCEKIFAELSEVMDHGEEHKHDLEDGAVYPCPLCDYGYSNAKWLKGHLKAAHEKKEVQKPMDIEETIKKEDGKSKPASPIARRTRSSCKRTENDGSKESPVPPLDNVGKLLSNAESADSTLLIKTEVKQEALASSDDEIWIVQTGDDDATKQLESLFNAAKGHQKQETCPKTIHKCFNCSRIFTSEECLSSHKCRIPRRGRKRKSESKEDSAICVPTKEDFLKRAQGRPRVVTPDNDLLVVRPRRRKNKEPTSDPQIVTCHNCNESFTSKVRLKFHMQFHETPTPAGQSRYSCAACGEQQFATETALFDHVHFQHHRRRRWRCPVAGCGKSFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHEEELTPTLVLVCAACRRAFRGQSDAQEHIANSPECMEGFVKELKQEADEATAQLSPTSGLVKVIESPPPPAVVPRQVSNALAAPLLAGLTDEARSVMRVVEIEKAFRCEYCEDVFYLEDALNSHRAIHKGVKNPFVCHICKVSFATYSRCTTHKTTHGFYKRSLAEAKKNASKPSEPEAGPSATGILGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANDFLYKCNHCDLTFPNSWSLAYHRKKIHGQTGQGDANSTTKIPREDYRIPCRDCDEVLPNKTALYKHRKKEHSDMTSSLAANNEPTTVWCGACGAQFNSRVALDAHTRSHTNTAVASVASCAKCGDSFAHISDLHKHVDSAQCRRRAHACPVCARSFRSASVRDEHLRTHTGERPFPCDVCGLAFRRLTAMRNHRLIHTGVRAWACERCPKRFRIRSDLRTHARLKHPAHLAVIEIRGLNPTPDEVMEYLNANNISHTKVIEITKMSFAKGTSSIIPNCARALSMLGSVPRTQVTYSKPVIDDSDFQLPRRGRGIAKNPRRPKILQRGGDDVPQPPQEMFPVTLNVTGGELTDMDVQLLLRDGVLVNGNQMVQLQLDDNMLLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -