Basic Information

Insect: Ostrinia nubilalis
Gene Symbol: -
Assembly: GCA_963855985.1
Location: OY979764.1:2723352-2735633[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0034 0.3 12.5 0.4 1 23 284 306 284 306 0.93

2 18 0.0082 0.74 11.3 1.7 2 23 331 352 330 352 0.96

3 18 0.014 1.2 10.7 6.2 1 23 374 396 374 396 0.97

4 18 0.00086 0.077 14.4 0.2 3 23 402 423 400 423 0.95

5 18 1e-06 9.1e-05 23.6 0.2 1 23 428 451 428 451 0.98

6 18 0.06 5.4 8.6 6.9 2 23 489 511 488 511 0.93

7 18 3.1e-06 0.00028 22.1 0.3 2 23 518 539 517 539 0.97

8 18 6.2e-07 5.6e-05 24.3 2.2 1 23 545 567 545 567 0.99

9 18 0.0022 0.19 13.2 0.8 3 23 575 596 573 596 0.93

10 18 0.28 25 6.5 0.1 3 23 639 662 637 662 0.81

11 18 0.15 14 7.3 0.4 1 23 691 714 691 714 0.94

12 18 0.016 1.4 10.4 0.0 2 23 737 758 736 758 0.96

13 18 0.00044 0.04 15.3 0.6 1 23 762 784 762 784 0.98

14 18 0.0048 0.43 12.1 2.3 1 23 789 812 789 812 0.92

15 18 0.23 21 6.8 1.2 1 20 818 837 818 841 0.78

16 18 0.033 2.9 9.4 1.0 2 23 849 871 848 872 0.95

17 18 0.0026 0.23 12.9 3.6 1 23 877 899 877 899 0.98

18 18 0.0021 0.19 13.2 4.2 1 23 905 927 905 927 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0034	0.3	12.5	0.4	1	23	284	306	284	306	0.93
2	18	0.0082	0.74	11.3	1.7	2	23	331	352	330	352	0.96
3	18	0.014	1.2	10.7	6.2	1	23	374	396	374	396	0.97
4	18	0.00086	0.077	14.4	0.2	3	23	402	423	400	423	0.95
5	18	1e-06	9.1e-05	23.6	0.2	1	23	428	451	428	451	0.98
6	18	0.06	5.4	8.6	6.9	2	23	489	511	488	511	0.93
7	18	3.1e-06	0.00028	22.1	0.3	2	23	518	539	517	539	0.97
8	18	6.2e-07	5.6e-05	24.3	2.2	1	23	545	567	545	567	0.99
9	18	0.0022	0.19	13.2	0.8	3	23	575	596	573	596	0.93
10	18	0.28	25	6.5	0.1	3	23	639	662	637	662	0.81
11	18	0.15	14	7.3	0.4	1	23	691	714	691	714	0.94
12	18	0.016	1.4	10.4	0.0	2	23	737	758	736	758	0.96
13	18	0.00044	0.04	15.3	0.6	1	23	762	784	762	784	0.98
14	18	0.0048	0.43	12.1	2.3	1	23	789	812	789	812	0.92
15	18	0.23	21	6.8	1.2	1	20	818	837	818	841	0.78
16	18	0.033	2.9	9.4	1.0	2	23	849	871	848	872	0.95
17	18	0.0026	0.23	12.9	3.6	1	23	877	899	877	899	0.98
18	18	0.0021	0.19	13.2	4.2	1	23	905	927	905	927	0.97

Sequence Information

Coding Sequence: ATGGATCAAGAAGTTCAAAATTCTGATACCGAAGTTTTCGGAAGATGCAGGTGCTGCTTAGAACTTGGCAACGTGAAGGACATGTGGACTCCGTATCCATGGGATGGAGCTAATGAAATCTATGGTGAAATGCTCATAGAAACCTTCTCAATAACTTGGGATTCGTCAGCGACCAATGAGGTGATATGTGAAATGTGTGTGGGAAGACTACGGGACGCGCACACTTTTAAAAGGGAGGTGTTGGCCAGTGAAAAGTTGCTAATGGACGGAGCCTTAGattctGAATCAGAATCCGTTAATGAAGAAAAGTTATCGGAGATGGATCAGTACGAGATCATTACATACCACGAGGAAGGCGAAGAAGACAACGAGGAAATTGTATTCGAGCAGATTGAAGAGGATGATGTGCAAATCAAACAAGAAGAAGATGAGGACATTGAATATGAGGAAGTTGAATATCTAGACGATGAAGTAGCGGAAGAACACCAAAAGAAGGAGAAAAAAAAACGCAAAGCAGCTGCCGCTAAATCGTCTAAGAAAGCAAAAGCAGTGAGCATCAAACAAGCGCCGCAAGTTGGCAGAAAGAGGAACTACAGGATGTACACCGAGGCGACCCTCCGTCAATGCGTCGAGGAAGCAATGTCAAGCACGGAGCCTCTGTCCAAGGTGGCGGCGCGTTACGGCATCCCCAGGAAAACTCTGATCGCTAGAGTATACAACATCAAGCACGGGCTGAAACCTGATGCCCGGATCCGACCAAAGCCGGACGAGAGCCGGAAACACAGGCACAACGCGCGGACTATCCTGCACTACTCCACCGCTACGCCCTTTAAGACACACGGCTCAGATTTCGTCTGCTATTTCTGCAACGAAGCATATACCACCATCAGCGAACTAAGAAAACATAACGTCATCCACGCGCACGAATCAAATGAACTCCATTTAAAAATGGCTAGCGGTTTCAGTCTCAAACTCGACGTGACAGATTTAAAATGTCGTCTATGCAAAAAGAACTTTGACTCCTTAGAAAAATTTACCACTCATATTATCCAACACGGAAAAATTATACATACGGATATCAAAAACGTGATTATTCCGTACAAGTTTGACAAAGATGAGTTCAAGTGTACGCATTGCGATTCAGCGTTTAAATTCTTCAAACATCTCAGCGAGCATATGAGCGAGCACTATAGAAATTATGGATGCGACGAATGTGGGAAAGGCTTTATAAGCCTGCCTACGTTGCGGCAGCATAAGTTGAGACAACACACTATAGGGGATTTCAAGTGTGATATATGCCCCAAAAGATTCCCTACCAAGTCTCGCTTGGCAGCTCATCTGCGAGTCGTCCACATATATTCAAACGAAGCTCACAAGTGCTGGAAATGCTCTAAACTATTCCTAGACGCAGACGAAAAGGCTAATCATGAATTAGAATTTCATTCCGACGAGGCAAGACCATGCATTTGTGATGGGTGTGAGCGTAGATTTGATACTTGGATGAGCTTGAAGCATCATAAGACCCGTTGCCACTTCAACCAGCCTCAGAAAACATGTCCGGAGTGTGGCATGGTATTTTCTAGAAAAGCAACATTAGACAGACACATGGTGAAACACACCGGGGTCAAAAACTACAAGTGCCCGGACTGTGGGAAGAGTTTTGGCCACCGGCAGAACTTCCAACTGCATTTGAAGATACACAATGACGATTGCAAGCTGCTGTGTGAGCTGTGTCCCAGAAAGTTCACAAGGAGGTACAAGTGGAGGGACCACATGGCTTTCACACACAAAACGCCTAAAGAAATCGCGACGCATATGAACAACGAGCGACACTACCAATTCGTGCAAGAAATCACGAAGGTGCTGTCCCTCACCGACGCTGTCCCTTTCAAGGTAAAATCCGCCAGGTACTTCTGTGCGTTCTGCTACACTGCCAGTGAGAGCTTCGAGGACCCCAGCGAACTCAGAGTCCATACAGCCAGCCACGGACTGAAAGAAAGACTTGACAGACTCGACCAAATCATGAGGCCGCCGTTCCTCAACGAAATGTTACGCGTAGACATCGAAATGTTCAACTGCACGGTCTGCCAAACCCGCATACCGACGTGGAACGATATGTTCGTGCATCTGAAGGATTTTCACGATATTGAACTAGACCAGGTTTATGACAAATTGATTCCGTACAAGCTGAGCGCTCATAATGTAGTTTACTGCGCGCTGTGCAACGAAGATTTCCCGAATGTAGCCAATTTGGACTCTCATATGAACGCTCACTACTGCAATTATGTTTGCTCGGAATGTGGAGACACTTTTGTTACTGAAAATCGACTTAAACACCATATTATGATACACAACACGGGCAAGTTTTCGTGCGGGCATTGCGGGAAGACGTTCTCTTTGGAGAAGTACAAGAAAAAACACGAAGCGATGGTGCATAAAGAAGCTAAGTTGTTCAAATGCGCGGATTGTGGCGAAGCGTACCATTCTGAGTACGAAAGGCATTTGCACATAGTCGAAAAACACAAGGAGAAGGTGCGGATGTCGACCTGCGAATTCTGTGGGAAGACTTACGATTGGAAGCCATACTACATGGCCCATTTGAGGAAAGTTCACCACAAAGTGAAGAATTATAAGTGCAATTATTGTAACAAAAGTTTTCTTAGCGGACACGAATTGAAAATGCACGTGCAAAGGCACACGGGGAAAGGCAAGCATGTGTGCATGTTTTGCGAGAAGAATTACGTCACTTTCACCGAGCTGAAGAAGCATATGAAAAAGCACGCCGCTGAGATAATGTACGTGGACGAAGATAGCGTTGTAGTGAGCCAAAGCTAA
Protein Sequence: MDQEVQNSDTEVFGRCRCCLELGNVKDMWTPYPWDGANEIYGEMLIETFSITWDSSATNEVICEMCVGRLRDAHTFKREVLASEKLLMDGALDSESESVNEEKLSEMDQYEIITYHEEGEEDNEEIVFEQIEEDDVQIKQEEDEDIEYEEVEYLDDEVAEEHQKKEKKKRKAAAAKSSKKAKAVSIKQAPQVGRKRNYRMYTEATLRQCVEEAMSSTEPLSKVAARYGIPRKTLIARVYNIKHGLKPDARIRPKPDESRKHRHNARTILHYSTATPFKTHGSDFVCYFCNEAYTTISELRKHNVIHAHESNELHLKMASGFSLKLDVTDLKCRLCKKNFDSLEKFTTHIIQHGKIIHTDIKNVIIPYKFDKDEFKCTHCDSAFKFFKHLSEHMSEHYRNYGCDECGKGFISLPTLRQHKLRQHTIGDFKCDICPKRFPTKSRLAAHLRVVHIYSNEAHKCWKCSKLFLDADEKANHELEFHSDEARPCICDGCERRFDTWMSLKHHKTRCHFNQPQKTCPECGMVFSRKATLDRHMVKHTGVKNYKCPDCGKSFGHRQNFQLHLKIHNDDCKLLCELCPRKFTRRYKWRDHMAFTHKTPKEIATHMNNERHYQFVQEITKVLSLTDAVPFKVKSARYFCAFCYTASESFEDPSELRVHTASHGLKERLDRLDQIMRPPFLNEMLRVDIEMFNCTVCQTRIPTWNDMFVHLKDFHDIELDQVYDKLIPYKLSAHNVVYCALCNEDFPNVANLDSHMNAHYCNYVCSECGDTFVTENRLKHHIMIHNTGKFSCGHCGKTFSLEKYKKKHEAMVHKEAKLFKCADCGEAYHSEYERHLHIVEKHKEKVRMSTCEFCGKTYDWKPYYMAHLRKVHHKVKNYKCNYCNKSFLSGHELKMHVQRHTGKGKHVCMFCEKNYVTFTELKKHMKKHAAEIMYVDEDSVVVSQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -