Basic Information

Insect: Ostrinia nubilalis
Gene Symbol: X-element\ORF2_1
Assembly: GCA_963855985.1
Location: OY979743.1:2615459-2622808[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 36 0.00015 0.013 16.8 0.1 1 23 23 45 23 45 0.94

2 36 0.13 12 7.6 0.2 6 23 54 72 54 72 0.95

3 36 0.00072 0.065 14.7 0.5 1 23 148 170 148 170 0.98

4 36 2.1e-05 0.0019 19.5 1.0 3 23 178 198 177 198 0.98

5 36 0.049 4.4 8.9 2.4 1 23 204 226 204 226 0.99

6 36 4.6e-06 0.00041 21.6 1.9 1 23 232 254 232 254 0.98

7 36 0.0025 0.22 13.0 0.7 2 20 261 279 260 282 0.92

8 36 3.9e-05 0.0035 18.7 4.1 1 23 288 310 288 310 0.98

9 36 0.0045 0.41 12.1 2.1 1 23 315 338 315 338 0.96

10 36 0.00014 0.012 16.9 0.5 1 23 383 405 383 405 0.98

11 36 3.2e-05 0.0028 18.9 0.5 3 23 413 433 412 433 0.98

12 36 0.028 2.5 9.7 2.3 1 23 439 461 439 461 0.99

13 36 2.5e-05 0.0023 19.2 0.4 1 23 467 490 467 490 0.98

14 36 0.0016 0.14 13.6 1.3 2 20 497 515 496 518 0.92

15 36 0.00024 0.021 16.2 0.6 1 23 553 575 553 575 0.98

16 36 2.3e-05 0.0021 19.4 1.6 1 23 581 603 581 603 0.98

17 36 2.2e-06 0.00019 22.6 1.5 1 23 609 631 609 631 0.98

18 36 0.049 4.4 8.9 2.4 1 23 637 659 637 659 0.99

19 36 2.6e-05 0.0023 19.2 1.6 1 23 665 687 665 687 0.98

20 36 0.0025 0.22 13.0 0.7 2 20 694 712 693 715 0.92

21 36 3.9e-05 0.0035 18.7 4.1 1 23 721 743 721 743 0.98

22 36 0.0045 0.41 12.1 2.1 1 23 748 771 748 771 0.96

23 36 0.00045 0.04 15.3 1.9 1 23 816 838 816 838 0.98

24 36 0.00019 0.017 16.4 0.5 3 23 846 866 845 866 0.98

25 36 0.049 4.4 8.9 2.4 1 23 872 894 872 894 0.99

26 36 3.7e-06 0.00033 21.9 2.0 1 23 900 922 900 922 0.98

27 36 0.0025 0.22 13.0 0.7 2 20 929 947 928 950 0.92

28 36 3.9e-05 0.0035 18.7 4.1 1 23 956 978 956 978 0.98

29 36 0.0045 0.41 12.1 2.1 1 23 983 1006 983 1006 0.96

30 36 0.00014 0.012 16.9 0.5 1 23 1051 1073 1051 1073 0.98

31 36 2.1e-05 0.0019 19.5 1.0 3 23 1081 1101 1080 1101 0.98

32 36 0.049 4.4 8.9 2.4 1 23 1107 1129 1107 1129 0.99

33 36 2.5e-05 0.0023 19.2 0.4 1 23 1135 1158 1135 1158 0.98

34 36 0.0024 0.22 13.0 0.4 2 20 1165 1183 1164 1186 0.92

35 36 0.0034 0.31 12.5 3.5 1 23 1192 1214 1192 1214 0.98

36 36 0.00017 0.015 16.6 3.7 1 23 1219 1241 1219 1241 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	36	0.00015	0.013	16.8	0.1	1	23	23	45	23	45	0.94
2	36	0.13	12	7.6	0.2	6	23	54	72	54	72	0.95
3	36	0.00072	0.065	14.7	0.5	1	23	148	170	148	170	0.98
4	36	2.1e-05	0.0019	19.5	1.0	3	23	178	198	177	198	0.98
5	36	0.049	4.4	8.9	2.4	1	23	204	226	204	226	0.99
6	36	4.6e-06	0.00041	21.6	1.9	1	23	232	254	232	254	0.98
7	36	0.0025	0.22	13.0	0.7	2	20	261	279	260	282	0.92
8	36	3.9e-05	0.0035	18.7	4.1	1	23	288	310	288	310	0.98
9	36	0.0045	0.41	12.1	2.1	1	23	315	338	315	338	0.96
10	36	0.00014	0.012	16.9	0.5	1	23	383	405	383	405	0.98
11	36	3.2e-05	0.0028	18.9	0.5	3	23	413	433	412	433	0.98
12	36	0.028	2.5	9.7	2.3	1	23	439	461	439	461	0.99
13	36	2.5e-05	0.0023	19.2	0.4	1	23	467	490	467	490	0.98
14	36	0.0016	0.14	13.6	1.3	2	20	497	515	496	518	0.92
15	36	0.00024	0.021	16.2	0.6	1	23	553	575	553	575	0.98
16	36	2.3e-05	0.0021	19.4	1.6	1	23	581	603	581	603	0.98
17	36	2.2e-06	0.00019	22.6	1.5	1	23	609	631	609	631	0.98
18	36	0.049	4.4	8.9	2.4	1	23	637	659	637	659	0.99
19	36	2.6e-05	0.0023	19.2	1.6	1	23	665	687	665	687	0.98
20	36	0.0025	0.22	13.0	0.7	2	20	694	712	693	715	0.92
21	36	3.9e-05	0.0035	18.7	4.1	1	23	721	743	721	743	0.98
22	36	0.0045	0.41	12.1	2.1	1	23	748	771	748	771	0.96
23	36	0.00045	0.04	15.3	1.9	1	23	816	838	816	838	0.98
24	36	0.00019	0.017	16.4	0.5	3	23	846	866	845	866	0.98
25	36	0.049	4.4	8.9	2.4	1	23	872	894	872	894	0.99
26	36	3.7e-06	0.00033	21.9	2.0	1	23	900	922	900	922	0.98
27	36	0.0025	0.22	13.0	0.7	2	20	929	947	928	950	0.92
28	36	3.9e-05	0.0035	18.7	4.1	1	23	956	978	956	978	0.98
29	36	0.0045	0.41	12.1	2.1	1	23	983	1006	983	1006	0.96
30	36	0.00014	0.012	16.9	0.5	1	23	1051	1073	1051	1073	0.98
31	36	2.1e-05	0.0019	19.5	1.0	3	23	1081	1101	1080	1101	0.98
32	36	0.049	4.4	8.9	2.4	1	23	1107	1129	1107	1129	0.99
33	36	2.5e-05	0.0023	19.2	0.4	1	23	1135	1158	1135	1158	0.98
34	36	0.0024	0.22	13.0	0.4	2	20	1165	1183	1164	1186	0.92
35	36	0.0034	0.31	12.5	3.5	1	23	1192	1214	1192	1214	0.98
36	36	0.00017	0.015	16.6	3.7	1	23	1219	1241	1219	1241	0.98

Sequence Information

Coding Sequence: ATGTGCAATTCGGTATCACGGAAAAGTGTGGACGACGACGACATCGACGACAGATTCGTAAAGCGTTTCTCGTGTGACGTGTGCGGGCGGCGCTTCGTGCAGCTCGGCACGCTGCGGGCGCACGCGGCGCTGCACGAGCCCTTCCCGCACGCCTGCCCCTGCGGCGTCGGCTTCTACCGCGCGCACGACCTCCGCGCCCACAGGAACCTGCTGCACCTCGACCAGATACAGCAGACGCTCGCCGCGCTCACCCACAGGCAACAGAGGGCGTCCAGACACGAGATCCGGCAGACAAAAGTGGTTAAAGCAGCCAAAAAGGAACCGAAGCTGAAAATAGTCGAACCagtaaaaaaagtaaacaaacaaaaacgtTCGACCGAGACCCTAACAAGATACAGGTCTGAAGACGAGAATTTTATCATACCAAACGATGACAATAGTTTCTCATGTCCGACTTGCTATAAGATATTCAAATCTAAGCAAAGCGTGGTGGTTCATCTCGCCACCCACGCCCCGGTGAAGCCGATCCTCTGCAGTTATTGCGGCAGAGAATTTAGAAGGCTGCAAAATTTGAGGTCACATGAGCGGATACACAGAGGGGAGAAGCCGTTCAAATGCTCGTTTTGCCCCAAAGTGTCCGGCGACGCGTCGACGCACAAGCGCCATGAGCGCACGCACACCGGCGTCAAGCCCCACAGGTGCAACTTCTGCGGGAAGAAGTTCGCCGACGCCAGCGGGCTCAACGCTCACCGCAAACGGCACGAAGGCACAAAAGACGTCAAATGCCCGCATTGCCCCAAAATGTTCTGGGATAAAAAGACCTTAAGACAACACATCCCCGTTCACAGTGACGAAAAGAACTTCGAATGTCAAATATGCTCAAAAAGATTTTCGCAAAAATGTTACCTCAGAGTGCACTTGAAAGTTCACGGAGTTGAAAGATTTGAGTGTGACTACTGTGGGTTCCTTTCTATAcacaaatataatttaatgACACACATACAAAATAAGCACATGCATAAAAAGAAACCGAAGCCGAAAATTACAGTCGATCcagtcaaaaaacaaaaacgttGGACTGAATCCACGGCGACGAGATACAGGTCCGAAGAAGAGAATCTTATCAAACCAAACGACGACAATAGCTTCTCGTGTCCAACTTGCTATAAGATATTCAAATCTAAGGACAGCATGGTGGTTCATCTCGCCACCCACGCCCCGGTGAAGCCGATCCTCTGCAGTTATTGCGGCAGAGAATTTAAAAGGCTGCAAAATTTGATTTCACATGAGCGGATACACAGAGGGGAGAAGCCGTTCAAATGCTCGTTTTGCCCCAAAGTGTCCGGTGACCCCTCGACGCACAAGCGCCATGAGCGCACGCACACCGGCGTCAAGCCATACAGGTGCGACTTCTGTGAGAAGAAGTTCGCCGACGCCAGCGGGCTCATCGCTCACCGCAAACGGCAGCACGAAGGCACAAAAGACGTCGAATGCCCGCATTGCCACAAAATGTTCTGGGATAAAAAGGCCTTAAAACGACACATCCCCGTTCACAGTGACgtcaaaaaagtaacaaaacaaaaacgttCGACCGAATCCCTAACAAGATACAGGTCCGAAGACGAGAATTTTATCATACCAAACGACGATAATAGTTTCTCGTGTCCGACTTGCTATAAGATATTCAAATCTAAGCGAAACGTGGTGATTCATCTCGCCACCCACGCCCCGGTGAAGCCGTACGCGTGCAAATTGTGCGGTCAGAGGTTCACGCAAACGTCGGGGTTCTACAAGCACATGAAAGTACACAGCGGCGTCACGGAGTTCCGCTGCAGTTTTTGCGGCAAAGAATTTAGAAGGCTGGAAAATTTGAGGTCTCATGAGCGGATACACAGAGGGGAGAAGCCGTTCAAATGCTCGTTTTGCCCCAAAGTGTCCGGCGACGCGTCGACGCACAAGCGCCATGAGCGCACGCACACCGGCGTCAAGCCCCACAGGTGCAACTTCTGCGGGAAGAAGTTCGCCGACGCCAGAGGGCTCATCGCTCACCGCAAACGGCACGAAGGCACAAAAGACGTCAAATGCCCGCATTGCCCCAAAATGTTCTGGGATAAAAAGACCTTAAGACAACACATCCCCGTTCACAGTGACGAAAAGAACTTCGAATGTCAAATATGCTCGAAAAGATTTTCGCAAAAATGTTACCTCAGAGTGCACTTGAAAGTTCACGGAGTTGAAAAATTTGAGTGTGACTACTGTGGGTTCCTCTCTATAcacaaatataatttaatgACACACATACAAAATAAGCACATGCATAAAAAGGAACAGAGGCCGAAAATTACAGTCGAACcagtaaaaaaagaaaaacgttGGACCGAATCCGCGGCGACGAGATACAGGTCCGAAGAAGAGAATCTTATCAAACCAAACGACGACAATAGCTTCTCGTGTCCAACTTGCTATAAGATATTCAAATCTAAGCACAGCATGGTGGTTCATCTCGCCACCCACGCCCCGGTAAAGCCGATCCTCTGCAGTTATTGCGGCAGAGAATTTAAAGGGCTGCAAAATTTGAGGTCACATGAGCGGATACACAGAGGGGAGAAGCCGTTCAAATGCTCGTTTTGCCCCAAAGTGTCCGGCGACGCGTCGACGCACAAGCGCCATGAGCGCACGCACACCGGCGTCAAGCCCCACAGGTGCAACTTCTGCGGGAAGAAGTTCGCCGACGCCAGCTGGCTCAACGCTCACCGCAAACGGCACGAAGGCACAAAAGACGTCAAATGCCCGCATTGCCCCAAAATGTTCTGGGATAAAAAGACCTTAAGACAACACATCCCCGTTCACAGTGACGAAAAGAACTTCGAATGTCAAATATGCTCAAAAAGATTTTCGCAAAAATGTTACCTCAGAGTGCACTTGAAAGTTCACGGAGTGGCAAGATTTGAGTGTGACTACTGTGGGTTCCTTTCTATAcacaaatataatttaatgACACACATACAAAATAAGCACATGCATAAAAAGGAACCGAGGCCGAAAATTACAGTCGAACcagtcaaaaaacaaaaacgttGTACCGAATCCACGGCGACGAGATACGGGTCCGAAGAAGAGAATCTTATCAAACCAAACGACGACAATAGCTTCTCGTGTCCAACTTGCTATAAGATATTCAAATCTAAGGACAGCATGGTGGTTCATCTCGCCACCCACGCCCCAGTTAAGCCGATCCTCTGCAGTTATTGCGGCAGAGAATTTAGAAGGCTGCAAAATTTGAGGTCACATGAGCGGATACACAGAGGGGAGAAGCCGTTCAAATGCTCGTTTTGCCCCAAAGTGTCCGGCGACGCGTCGACGCACAAGCGCCATGAGCGCACGCACACCGGCGTCAAGCCCTACAGGTGCGACTTCTGTGAGAAGAAGTTCGCCGATGCCAGCGGGCTCATCGCTCACCGCAAACGGCAGCACGAAGGCACAAAAGACGTCAAATGCCCGCATTGCCCCAAAATGTTCTGGGATAAAAAGGCCTTAAGACAACACATTCCCGTTCACAGTGACGTAAAGAACTTCGAATGTCAAATATGCTCAAAAAGATTTTTGCAAAAATGTTACCTCAGAGCGCACTTGAAAGTTCACGAAGTTGAAAGATTTGAGTGTGACTACTGTGGGTTCCGTTCTAGACACAGATATAGTTTAAAGAATCACATACAAATGCATATGTTTAAGTTTACTGATAAAAAGAAACACTACTCTATTGTGCATAGACGACAATCCCGACTCTCTATCAACAACAAACTGCTCGTCTATAAGTCTATTATCAAACCAATCTGGACCTTCGGAATAGAACTCTGGGGATCTGCTAGCAACTCCAACCTGGAAATATTACAGAGATTCCAAAACATTGCATTGAGAACAGTCTCCAGCGCCCACTGCAAAAAGTACAGGCAGAAACTCGACAGACATAGCAACGCGCTGGCCAAGAACCTGCTAATGGACGAAGATACAAAGCGCCTCAAGAGATGGCACATCCTCGAGCTCAGCGAGAGAAAGTAG
Protein Sequence: MCNSVSRKSVDDDDIDDRFVKRFSCDVCGRRFVQLGTLRAHAALHEPFPHACPCGVGFYRAHDLRAHRNLLHLDQIQQTLAALTHRQQRASRHEIRQTKVVKAAKKEPKLKIVEPVKKVNKQKRSTETLTRYRSEDENFIIPNDDNSFSCPTCYKIFKSKQSVVVHLATHAPVKPILCSYCGREFRRLQNLRSHERIHRGEKPFKCSFCPKVSGDASTHKRHERTHTGVKPHRCNFCGKKFADASGLNAHRKRHEGTKDVKCPHCPKMFWDKKTLRQHIPVHSDEKNFECQICSKRFSQKCYLRVHLKVHGVERFECDYCGFLSIHKYNLMTHIQNKHMHKKKPKPKITVDPVKKQKRWTESTATRYRSEEENLIKPNDDNSFSCPTCYKIFKSKDSMVVHLATHAPVKPILCSYCGREFKRLQNLISHERIHRGEKPFKCSFCPKVSGDPSTHKRHERTHTGVKPYRCDFCEKKFADASGLIAHRKRQHEGTKDVECPHCHKMFWDKKALKRHIPVHSDVKKVTKQKRSTESLTRYRSEDENFIIPNDDNSFSCPTCYKIFKSKRNVVIHLATHAPVKPYACKLCGQRFTQTSGFYKHMKVHSGVTEFRCSFCGKEFRRLENLRSHERIHRGEKPFKCSFCPKVSGDASTHKRHERTHTGVKPHRCNFCGKKFADARGLIAHRKRHEGTKDVKCPHCPKMFWDKKTLRQHIPVHSDEKNFECQICSKRFSQKCYLRVHLKVHGVEKFECDYCGFLSIHKYNLMTHIQNKHMHKKEQRPKITVEPVKKEKRWTESAATRYRSEEENLIKPNDDNSFSCPTCYKIFKSKHSMVVHLATHAPVKPILCSYCGREFKGLQNLRSHERIHRGEKPFKCSFCPKVSGDASTHKRHERTHTGVKPHRCNFCGKKFADASWLNAHRKRHEGTKDVKCPHCPKMFWDKKTLRQHIPVHSDEKNFECQICSKRFSQKCYLRVHLKVHGVARFECDYCGFLSIHKYNLMTHIQNKHMHKKEPRPKITVEPVKKQKRCTESTATRYGSEEENLIKPNDDNSFSCPTCYKIFKSKDSMVVHLATHAPVKPILCSYCGREFRRLQNLRSHERIHRGEKPFKCSFCPKVSGDASTHKRHERTHTGVKPYRCDFCEKKFADASGLIAHRKRQHEGTKDVKCPHCPKMFWDKKALRQHIPVHSDVKNFECQICSKRFLQKCYLRAHLKVHEVERFECDYCGFRSRHRYSLKNHIQMHMFKFTDKKKHYSIVHRRQSRLSINNKLLVYKSIIKPIWTFGIELWGSASNSNLEILQRFQNIALRTVSSAHCKKYRQKLDRHSNALAKNLLMDEDTKRLKRWHILELSERK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -