Onub027717.1
Basic Information
- Insect
- Ostrinia nubilalis
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_963855985.1
- Location
- OY979758.1:9173702-9220944[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-13 2.3e-10 40.9 0.0 1 38 368 406 368 413 0.92 2 2 2.1e-18 2.1e-15 57.1 0.0 1 43 573 616 573 618 0.95
Sequence Information
- Coding Sequence
- ATGGAGCCAAACGACTTAGGGCTGACAAGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATGCCAGGACGCCTTAATACCAAAACGGAGCGAGCCGGAGGCTTCGAGCGACGAGTCTATGCCTGCCACCGACCCCCCTCCCGCGCTGAAGATCAAGACCATAGAGCAGATCAACGACCAGGAGCGTCCGAAGGAGCCGGACAGGGAGGACTCCGAGAAACGGCGTCCGGAGACGATCCTGGAGAGCCTGATCAAGCGTCCGGCGACGCAGCCGAAGCTGGAGCTGCCGGACGAGCCTACGGACTGGAAGCCAGCGGACAAGTGCTACTTCTGCGTTGACGGGGAGAGGGGGGAGAGGGACGCGGCGGAGGggccggcgggcggcgcgaCCAGTCCCGCGTCGGAGTCGGACAGCAGTTCGGTGTCGGGCGCCAAGAGCccggccgccgcgccgccgctgctGCAACACCTGCTCCAGCTGCAACTGCAGGCGCAGACCCCGCAGGCCATTGCGCAGTTGGAACTGCTGGAACATCTCTCTCAGGCCATCGCGCAGGTGAGAGACCCCCGCAGGTGTAGCCTTGAGGACAGCAGTACTGCTGCAACACCTACTTCAGCTGCAACTCCAGGCGCAGACCCCGCAGGCCATCGAGCAGGTGTAGCCTTGAGGACAGCAGTACTGCTGCAACACCTACTTCAGCTGCAACTCCAGGCGCAGACCCCGCAGGCCATCGCGCAGCTGCAACTCCAGGCGCAGACCCCGCAGGCCATCGCGCAGTTCCAGCAGATGATCGCGGCGCTAGCGGCGTTGGGGACAGGACTGGTGCCGCCGGCGCTGTCGCAGGTGTGGCTCATGCAGCGGCTCGCGCAGAACAGACAGCATGCTACGGATAGGCTACCAGAGTCAGGCGAGAAGCCGGCAGCACCATCGTCGCCCACGCTGGCGGAACAGCCGCTGGACCTCAGCGCCAAGTCCACCTCGAGCACCAGCGGCACCCCGCCGCCTGACGCCAAGATCCTGGACAGTAGGCTGAAACGCAGCGCCATCGACGGCGCCGGCAACAGCGCAGCGCGGCGCACCTACACCGACGAGGAGCTGCAGTCGGCCCTGCGCGACATCCAGGCCGGCCGCCTCGGGacccgccgcgccgccgtcgTCTACGGCATCCCGCGCTCCACGCTCCGCAACAAGGTCAACAAGTTCGGCCTCGCCGCCGACAACTCCGAGCCCGACAGCGACCAAGAAAGACCAGACTCGCCACCCTCCGTCATCCTCAAAATACCCACCTTCCCCCCACCTGACGAAAAGAGCCCCTCCCCTGCCACCCCAGTCACCACACCCGTTACACCCATAACACCTATCATACCCCAGCCCCAGCCCTCTCTCAACCCCTCCGCACATCTGCCCGCGTTCTTCGCCGACCCGCCGACCGCCAACCAGCACCTCTTCACGTCCATCAACGACGTCATCGTCCGCAGCATCAGCCAGAAGTTCCAGCAGCTGCCGGACCGGCCGCCGCAGCCCGCCGACTTGTACATGCGCGCGCCGGACCGCCACGTGTCCGTCATCAAGACCCCGCCCGACAACCAGCGGAGCTACCCCGTGCCCAGCAACTCCAAGGCCGCCATCAACAACAACGGCCAGCCCGCCGCCGGCGGCAAGGGCACGCGCCCCAAGCGGGGCAAGTACCGGAACTACGACAGGGACAGCCTCGTCGAGGCCGTCAAGGCCGTGCAGAGGGGCGAGATGTCCGTGCACCGAGCGGGCTCGTACTACGGCGTGCCGCACTCCACTCTGGAGTACAAGGTGAAGGAGCGGCATCTGATGCGGCCGAGGAAGCGGGAGCCGAAGCCCCCGCAGGACGTCAAGCCGCAGCCGCCGAAGCCTCCGCCGCCGAAGCCGCCGACGAAACCGTTCTCGAACGGGCTCAACGGCCCCGAGACTCCCGCGTATCCGCCGGGATATCCGTTCTGGCCCGGCGCTGGATTCGCGCCGCCGTCACCGGACTTGTACGCGTCGCACATGATGCGGCGACTGCGCGAGGAGGCGCCCCCGCCGGCGAACGGCTCCTTCCTCGAGGGCATCATCAGGTCGAGCCTGGAGCGGCCCGGCGCCGCGCTGATGCACCGGCTGACGGAGCCGCGGCCGCCGCTGGCGCCGCAGGACGCGCCCAGCCTGCTGCGGCGGCTGGCGGGCGAGCCGGCCGAGGAGCCgccggcgcggcgcgcgcgcgtggACAGCTCGGACCGGCAGCTGGCCGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCccacgccgcccgcgcccgcgtcgccgcccgcgccgcccgccgcgccgcccgcgccccccgACCGCGCCTAG
- Protein Sequence
- MEPNDLGLTSLERVAEELMGRRKWKLCQDALIPKRSEPEASSDESMPATDPPPALKIKTIEQINDQERPKEPDREDSEKRRPETILESLIKRPATQPKLELPDEPTDWKPADKCYFCVDGERGERDAAEGPAGGATSPASESDSSSVSGAKSPAAAPPLLQHLLQLQLQAQTPQAIAQLELLEHLSQAIAQVRDPRRCSLEDSSTAATPTSAATPGADPAGHRAGVALRTAVLLQHLLQLQLQAQTPQAIAQLQLQAQTPQAIAQFQQMIAALAALGTGLVPPALSQVWLMQRLAQNRQHATDRLPESGEKPAAPSSPTLAEQPLDLSAKSTSSTSGTPPPDAKILDSRLKRSAIDGAGNSAARRTYTDEELQSALRDIQAGRLGTRRAAVVYGIPRSTLRNKVNKFGLAADNSEPDSDQERPDSPPSVILKIPTFPPPDEKSPSPATPVTTPVTPITPIIPQPQPSLNPSAHLPAFFADPPTANQHLFTSINDVIVRSISQKFQQLPDRPPQPADLYMRAPDRHVSVIKTPPDNQRSYPVPSNSKAAINNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVKPQPPKPPPPKPPTKPFSNGLNGPETPAYPPGYPFWPGAGFAPPSPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALMHRLTEPRPPLAPQDAPSLLRRLAGEPAEEPPARRARVDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPAPASPPAPPAAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -