Ofur004660.1
Basic Information
- Insect
- Ostrinia furnacalis
- Gene Symbol
- -
- Assembly
- GCA_004193835.1
- Location
- NW:183322-212678[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2.2 1.1e+02 3.4 0.6 1 23 52 75 52 75 0.95 2 21 0.072 3.6 8.0 2.1 1 23 82 105 82 105 0.97 3 21 3.1 1.5e+02 2.9 5.5 1 23 181 203 181 203 0.97 4 21 0.0019 0.092 13.0 1.1 2 23 209 230 208 230 0.98 5 21 4.3 2.1e+02 2.4 2.6 1 23 236 258 236 259 0.94 6 21 0.054 2.7 8.4 3.1 2 22 493 513 492 513 0.96 7 21 3.1 1.5e+02 2.9 1.0 1 23 611 633 611 633 0.82 8 21 0.48 24 5.4 0.3 2 23 767 788 766 788 0.96 9 21 0.0057 0.28 11.5 0.8 2 23 865 886 864 886 0.96 10 21 0.034 1.7 9.0 1.4 1 23 894 916 894 916 0.97 11 21 0.11 5.5 7.4 3.4 1 23 952 974 952 974 0.95 12 21 0.00022 0.011 15.9 4.0 1 23 982 1004 982 1004 0.99 13 21 0.035 1.7 9.0 1.7 1 23 1079 1101 1079 1101 0.99 14 21 7 3.5e+02 1.8 1.1 1 19 1156 1174 1156 1178 0.90 15 21 4.4 2.2e+02 2.4 0.2 1 23 1185 1207 1185 1207 0.94 16 21 0.00056 0.028 14.7 0.0 1 23 1273 1295 1273 1295 0.96 17 21 0.0083 0.41 11.0 0.6 1 23 1301 1323 1301 1323 0.96 18 21 0.0061 0.3 11.4 2.6 1 23 1414 1436 1414 1436 0.97 19 21 0.00015 0.0076 16.4 1.4 1 23 1442 1464 1442 1464 0.99 20 21 1.7 82 3.7 2.4 1 23 1555 1577 1555 1577 0.96 21 21 0.0095 0.47 10.8 3.9 1 23 1588 1610 1588 1610 0.98
Sequence Information
- Coding Sequence
- ATGCTTCAGCAGATGTCCTCGCCGTCGAGCGCGCAAGTCGGCGAGGTCGGCTCTCTCGTGCGCCCCTTCGAAGGCCGGTTGTGCGACGCGTCGTCCGAGGCCTCCTCCGATGCCGCCGAGGAGGACTTACCACAGTGCAAAATACGGAGAAATTACAACTGCGCCAAGTGCACTTACTACACGCAGAACCCGCGCGCCTTCCTTGTACACACGCGTGACGTGCATTTCGAAAGATTCAAAATATACGATTGCCCCAGTTGCGTGTACGCTTCTAGGCATCATCAGAAACTTATAAGACACATCAAAATGGTCCACGGAGCGGCCGCCACCACGAACATAAAAGTGGATGTCGAACTACCCGCCGCGACGGAAACCGCAGAACCGGTCGAGCGAATAGAGGACTTGCTCGAGGAAATCGAGGAATGTGACGATGACATTGAGATCGACGTCGATGACTGTTGCGAGGAGTCGTTCGAGGTCGACGGCGACAAATCCACCAACGAAGAAGGACTTTCCATACTGAAGAGTGAAAACAAATACTTTTCTTGCACCAAATGCAACTACGCGACGCATATAAAATCGCGTTTCACGAAGCACGTGAAGTACCACTCGATGCCGATGAACAAGTGTACCATATGTGATTTTCGTTCGCCTTACAAATGGAATCTAGACCGGCACATGAAGAATCACGGTGGGAGCGGAAGCTTCAAGTGCTTCAtgtgcaacttcacggcggacaTCAAGCAGAGTCTGACGTCGCACGAGCTGAATCATCACGCGTCGCCCGCGGGCCAATCGGTCGCGAGTCGCCGCCGCAATCGGGTGGGCGCCAGCGACATTATGAACGCGCTGGTGATGAAGGAGGAGGAAGGGAGCGACTCGCGGTCCTCCTGCTCGGCCTCGGAAATGGGTCTTCAATGTGCAGATAAAGAAATGTTAAGCTGCAACAGCGACTCAAACGACGCTGCAGATGGAAGAAGCAAAAATGCTTCACCATCACAGGACATTCAAAGCCAACAGTCACCCAACGCCGCAACGGAAGAATCCAAATCACACAAGAACAATAGGAAAGTCCCCAGGCCTTTACCACAGCTCATTCCGTTGCACACTTCTACACCCACTAATAATAAGACACCATCAGGTGAGCCCCCGGCGAAAAAATTCAAAGAAAACCCAAATTCGGAATCCACTAAAACAACTAAGTTCGAAAATTTACCTGTAGACATCACTTTGATTCCGGTTAACAACATTCCTATCAATACTAAAGAAAATGTAGGTCGtaagaaaaataattcattCTTTGACAAACTGAAAGAAAGATTGCTAACTGAGACGGGCGAGAAAGGATCTCTTATCTGCAAAAACTGTGGGTTTGAAAGTAAATGCTTATCTGAACATTCCGTACACGAGAAAAATTGCGCTTCTCAGTTGAATAAGTCCGCAACGAACACCTTACTTCCGAGTCTAAGTTCAACACGTTGCCAAAATTGCCGGCACCGATGTAAATCTAGTGCAGATCTTATCATACACATGAAAACGTGTAGAAAGATTGAAAAAATGGAAGATGACACCGTTGAAGTCAAAAGCCAAGACAGCAATGATGAAATCATCACAGTTCAAGATCGAGAAACAGAGCCACATCCGATGGAAAACGTAGTATTCGTATGGAACAATATTAATCAGGATTCCAACAAATTTGATACACCTcttgatataaatattaatgatgaTTCCACGCTCCCAGAAATGTGTAGAAGTTTCGATTTGGACATCGCGGAAGACAATGAAGGCATGAATTTGTCACCTAGTCAAGCCATGGGGAAAAAAGTTTTCAAGTGTCCACACTGTCCATTCTGGGCTTCCACTGCGTCAAGATTTCACGTCCATATTGTAGgacatttgaataaaaaacctTTCAAATGTTCTCTCTGTAAATACAAATCTAACTGGCGTTGGGACATCACTAaacacatcaagctaaaatCAGCTAGAGACCCCGAACATAATGAGGCAAAAGTCCTAATGACTGATGAGACTGGCCGAAGAAACTATAGCAAGTACAACAAGTTCTTAGCTATGTCAGTTTTGAATGAGAATGGAGAGACTGTGTTCCATTACATAGACCAGAATCCTTCAGCTCATCCGTCCATAGAGGGTATAGAATCTTACAATGACATGAACGACAACTTTAATCACACTTTAGAAGTGCAACCACTCAACCTCCAGATGAATCATTCTGATGGTGAGGCATTCGATAACCGAAGCATGGATCAGATGAAACCCAAGAAAACATTGTGGAAATGCAAGAAATGCAATTACAGAGACCCATCCAAGGAGGCCCTGTTAGAACACGTTCGAGAACACTCTACAGCCGACGGGAACACCGACGGGATGAAACCTCCCAAGAAACCGGATAACGTTCCCGACCCGGCAGACTTGGCTTATCGCTGCGGCCACTGCAATCAATTATCGAACTGGAAACATGTTATACAGAGACACTGCCGCCTCAAGCACGATGGTATTATCAAAGTCATAACTACGGTGAAGCCGAAGCCAGATCCAGGGTTGGGACTGAACGACATTCACGGAGACACATGTAACAAGTGTCCATTCAAAACTAGCGACAAAAAACTATTACTAGCTCACCTCCAACAACATCAGCCATCACCACAATCTATTTTCAAGTGCTTCTTCTGTCCCTACTTTGTTAAGGATGAACACGAACTGATTCAACATCTCATCCTGCACGGCGTCAATGAACCAGAAGAATACATAGCGAGAGCAATGGGTGCTAAATCTCCAATTCCTGAGCCAGCTTCGAATTCGACCCCAAACACGTCATCCACAAAGAGACACAAATGCACCGAATGTCCTTATGAAACCAACAGCAAGTCTCAGTACATGTACCACGAGCAATTCCATCGACTTCCAGCTGACACGCCTTATAAGTGTCCCGAATGCAACTACAGTGTATCAAAAAGACATTTGCTACACCAACATTTAAGAGTCCATGGGATAAACTCCAAGAAACTTGAAGCTGAATTAGAGTCTAAAACGGACTTGAGAATTGAAATAAATCTGGACGAGATCCCATTTGTTTGGGTTTCGGCAAAGAATGAGTTCCATAAGATGTACAAATGCCGTTACTGCTCGTATGTGAATtctcaaaaatgtaaaattcctAATCACGAAAAAATTCACTGCGTTGTGTTTGAAAATAGTGAAATGATAATTTACAAATGTTTGGAATGCAAATATACTTGTGACAGTGCTGTAAGACTAGCCGAGCATTCAAGAACCCATGGTGAGATTTATGGTCGCATTTATTGCCCTGTTGACGCCGATATCCCCGATGAGGAACAGATCGCTAAGTTGCGTAAAGTTATTGAAGCAGAAAAAAACACGACTTCGGAAGGAAATAAGGAAGATGAAGCTGGTGATGAAAATAAAGAATCCAAAACACTGtatttttgtcaaaaatgtCCAGCAAGATTCTTTGCTGATGAAGAACTCAAAAATCATGACAATTTTCACAATAATTCAGCTTTACCGCATAAATGCCCAAGCTGCGAATTTTACGTTCCCGAGGAAAGTGAGCTCAGTGAACACACTGTAGTGCATTCAGATGaatatcatacaaaaactaaaatgCTTAAGTTCATTCACAGCTGCAGTGCAGCCCACAGGCAGCCTAATCTGGATATAGTTCTTAATACAACCACAACAGACATAACGTGGGGAGTGTCTAACCCCagcaaaaattacaataacgaTACCCATAAAGGATCAAACGAGACTAAACCAGTGCCAAAACAATACGCTTGCAAAGAATGCCCAGCTAGATTTATCAAAAGTTCGGCCCTTACCGGTCATATGGCACTACACGGCAGTAATTATCCACATAAATGTAAATTGTGTAGCTACGCCGTTAGGAATACAGGCAATTTGGCAAAACATGTAGCGTTGCATGAAAATGACGGGAAAGCGTCAAACTGTGATTACGAGTCAGGAGACGACAatatggatttcaaaaatataccCTTATCAGGGACAGATTTATTTCAACGAAAAACAGAAGCTCAAAAAAGAGTGCTGATTGATAAAGATAAATTGGTTAAACCAAATGATCATTTTCCGCCTGTGCTGCAAGCTGATCCTCAGTTCGGATACCTGATGCACGGCAATCCAGAGTTCATATACCCCACTTATCTGAAAAACGGTCGCCAGAAGGAAAAGCGTTACAAGTGTCACAAATGTCCGTCTGCATTTGAAAAACGAgaacaatataaaatacatcTTTCACTGCATGGTTCCAAACAAAGATATAAATGTGAACTTTGCGATTACTCCGTTAAGTATTATGCCAACTATGTTCAACACATGAGAAAGCATCAAATGAACGACGAAGCGCaagctgaaagaaagaaaaccagTAATGGTGTTATTGAAACTGAAACTCAAGAAGTCAAGCAGGAAGACACCGACAACATAAAATTAGCAATTAAAACAATGCCTAAAGGTACTCCCAAAAGCGATTTTCAGCAGTTCTCATTCAGCGATCAACAAACTCTTAGAATACTGCAACGCAGACGCTCATTGAACAACAGTGGCAAGGAACAGTCTTCGCCATCAGATGTATCACATTTGAAGGACCGGAAATTACACATGTGTTTACTGTGCCCGTACACAAATCAACGCCAAGACGCTTTGTTTAATCATTACAAACGGCATGATGATACTGATGTTTCTAATTTAGGTAatcataaatgtaatttttgtgaTCTTGTAGTTGTACAGTCACATTTCCTCCGAGACCATTTGAAAACACATTTTACATACCAAAAGACATTGACGCCAGAATGTTATGTCGCTAATGAAAATGTGAGTTTCACTATCACAAAAGtcgatgatgaagatgatgcaCCTATTGATCTCAAATTAGATATGCAAAGCAAGAAATTCAAGTGCAATGAAGACAAAATTTTTGTTAAGATACAAACGGGAGAACTTAtggttgaataa
- Protein Sequence
- MLQQMSSPSSAQVGEVGSLVRPFEGRLCDASSEASSDAAEEDLPQCKIRRNYNCAKCTYYTQNPRAFLVHTRDVHFERFKIYDCPSCVYASRHHQKLIRHIKMVHGAAATTNIKVDVELPAATETAEPVERIEDLLEEIEECDDDIEIDVDDCCEESFEVDGDKSTNEEGLSILKSENKYFSCTKCNYATHIKSRFTKHVKYHSMPMNKCTICDFRSPYKWNLDRHMKNHGGSGSFKCFMCNFTADIKQSLTSHELNHHASPAGQSVASRRRNRVGASDIMNALVMKEEEGSDSRSSCSASEMGLQCADKEMLSCNSDSNDAADGRSKNASPSQDIQSQQSPNAATEESKSHKNNRKVPRPLPQLIPLHTSTPTNNKTPSGEPPAKKFKENPNSESTKTTKFENLPVDITLIPVNNIPINTKENVGRKKNNSFFDKLKERLLTETGEKGSLICKNCGFESKCLSEHSVHEKNCASQLNKSATNTLLPSLSSTRCQNCRHRCKSSADLIIHMKTCRKIEKMEDDTVEVKSQDSNDEIITVQDRETEPHPMENVVFVWNNINQDSNKFDTPLDININDDSTLPEMCRSFDLDIAEDNEGMNLSPSQAMGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFKCSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMSVLNENGETVFHYIDQNPSAHPSIEGIESYNDMNDNFNHTLEVQPLNLQMNHSDGEAFDNRSMDQMKPKKTLWKCKKCNYRDPSKEALLEHVREHSTADGNTDGMKPPKKPDNVPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDPGLGLNDIHGDTCNKCPFKTSDKKLLLAHLQQHQPSPQSIFKCFFCPYFVKDEHELIQHLILHGVNEPEEYIARAMGAKSPIPEPASNSTPNTSSTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGINSKKLEAELESKTDLRIEINLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCVVFENSEMIIYKCLECKYTCDSAVRLAEHSRTHGEIYGRIYCPVDADIPDEEQIAKLRKVIEAEKNTTSEGNKEDEAGDENKESKTLYFCQKCPARFFADEELKNHDNFHNNSALPHKCPSCEFYVPEESELSEHTVVHSDEYHTKTKMLKFIHSCSAAHRQPNLDIVLNTTTTDITWGVSNPSKNYNNDTHKGSNETKPVPKQYACKECPARFIKSSALTGHMALHGSNYPHKCKLCSYAVRNTGNLAKHVALHENDGKASNCDYESGDDNMDFKNIPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKTSNGVIETETQEVKQEDTDNIKLAIKTMPKGTPKSDFQQFSFSDQQTLRILQRRRSLNNSGKEQSSPSDVSHLKDRKLHMCLLCPYTNQRQDALFNHYKRHDDTDVSNLGNHKCNFCDLVVVQSHFLRDHLKTHFTYQKTLTPECYVANENVSFTITKVDDEDDAPIDLKLDMQSKKFKCNEDKIFVKIQTGELMVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01125937;
- 90% Identity
- iTF_01125937;
- 80% Identity
- -