Basic Information

Insect: Ostrinia furnacalis
Gene Symbol: -
Assembly: GCA_004193835.1
Location: NW:18608-62465[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.00069 0.034 14.4 3.2 1 23 538 560 538 560 0.99

2 6 0.023 1.1 9.6 1.1 1 23 578 601 578 601 0.91

3 6 0.02 0.97 9.8 0.3 2 19 608 625 607 629 0.89

4 6 0.00039 0.019 15.1 0.1 2 20 637 655 637 656 0.95

5 6 0.0002 0.0097 16.1 4.6 1 23 670 692 670 692 0.95

6 6 2.7e-05 0.0013 18.8 0.1 1 23 697 719 697 719 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.00069	0.034	14.4	3.2	1	23	538	560	538	560	0.99
2	6	0.023	1.1	9.6	1.1	1	23	578	601	578	601	0.91
3	6	0.02	0.97	9.8	0.3	2	19	608	625	607	629	0.89
4	6	0.00039	0.019	15.1	0.1	2	20	637	655	637	656	0.95
5	6	0.0002	0.0097	16.1	4.6	1	23	670	692	670	692	0.95
6	6	2.7e-05	0.0013	18.8	0.1	1	23	697	719	697	719	0.98

Sequence Information

Coding Sequence: ATGGCCCTCTGTGAAAGCCAGCTCGATTCAGCACTACCTCAGTTGAAGCGGGAGGAGAACTCCCACGGCAGCAGCGACGAGTGCAAGAGCCCCGACAAGAAGCCTACGATGGAGCCCAATGGGGACATCTACGGGCTGGACCAAGTGCCTGGAGGTCTACCCCTGAGTGTGGACTACCGATCCCCGGTCTCCCACTTTGTGCCGCCAGCTGTCGAGTTGTACGCGGCAAGACACAAACCCGAGCAGATCAGTCCGCCAGAGCCTTCAGTGGTAACTCCGATCAAGCGTAAACGGGGCAGACCAAGGGTAGACAAGACCAGTCCAGAATATTTGGCCAATCTGGCCGCGAGAAAGCAGGCCAAAGAGATGGCGGCCGTGATGAATAGTCGCTCGCCAGCAATCGAATCCGGGGAGAAACGTAAGCGAGGCCGCCCTAGAGTCGACAAGACCAGTCCTGAATATCTGGCCAGGAAGCGGGCTAGGGAGTTGGAAGCATTGGAGCGGAAGGCGAAACGAGAGTATAAGCGGCGCGGGACTGCAGCAAGAGAACATTTTCGGCCAACAGCGAAACCGGTATCAGTAGTGCCCCTCAAAGTGGGGGGTAACCGGGTCAAAAAGTTGCCAACGGCAAAAAAACCGATCGCGACCCCCATAAGGAAAGCGCCCCCTAAATTAGGGGCGAGGAAGGTGGTGGACAAACAAGCTATGAGCATTATCAGGCGAAATGctaaatttataaaaagaaaagATTCGGCTGCGTCGTCCTCGGCTGGCGAGACGACGCCGCGTGTTAAGCGCAAATACACAAAACGCGCGCCAAGCGCCAAGAAAAATGACGCGGGAGGAAGCACAGAGCGAGTGAAGGGAAAACGAGGACGGCCTCGTAAGACGGACCAAATGACACACAAGCAGGGGCAACAGCCTAAGATTCGTGTCAGAAGTAACCTGATGCCAGTCAACACGGAACCGATCACACTTGACAGCGACGACGAGCCCGACTTagGGTCACCGAGTCAAGCGTCTGACTCGCTAAGTCTAGACGAGAATCTGCGCGCGTTGCGACATATACACGAAAAGTACGCGAATATTGACAAGGATGACTTATACGAAGTTTCTTTGTACCAGGATGACTTATTCGAAGCGCACCTGCTACCCGCAAACTTCAAGAAACCGCTGTCGGAGCAGACGCAGCGGATTCGCGACGATGACGAGGTTCTCTCCGTGAGGAGTTCCGAAGGTAACGCATCAGTGAAAGAACTTGACACAAGAGTTGAGAAGCTGGAAGACAGCTCCAATTCGGATTCCGATAGCAGCAGTTCTGGATCTGGCAGTTCCAGCTCTGGCTCTAGTTCAGGCTCCAGTTCCGGCAGCTCCAGCTCTTCGGACAGTTCCGATTCGTCCGACGACGAAGCGCCCAAGACTGAACCGCCGCCGCAGAATAACACATCTATTGAGGACGACCAATCATTCGGCGCGTGGTCATACAGCGGTGGCAACCAGTCGGACGCGTCGGATTCCGACCCGGAGCGCGCGGGcgacccgggttcgattccccgcGCGAGCGAGCACGACGAGATCAGCGAGAGCGACAACGAGTCGGCCGACAAGAGCTTCCAGTGCCACATATGTCGGAAGTGGTACTCTACTAGGGTTACCCTTAAAATCCACAGACGCATCCATCAGAACCGTGGCGGCGCCAACTCAAGAGCCCGGACGCGCTCGTCGGAGCGCTACGAGTGCGACTGTTGCAGCGAGACCTTCAGCCGCCGCGAGAAGCTCTGGGAGCACaaAGCGGAAGCCCACCGTGGGTCCATGACGGTTCGCTGCGAAGTGTGCCGCAAGTGTTTCGAAGATGATGCAGAATTAGCGGCGCATGATCGAGCGCACACGCCCGATGAGCGAGCCGGCCGCTGCGCCGACTGCGGCGCAATGTTCGCGCGCTACGACCAGCTGCGCCGGCACCGCGCGTGCGCGCACGGCGCGTCGTCCGCCAACAGCAAGCTGCCGCACGCGTGCGCGCAGTGCGGGAAGCGCTTCGGCCACGCGCACTCGCTCACGCGCCACCTGCAGAACCACGCGCGCCAGCTCTACCGCTGCGTCGTGTGCAAGGCGTCATTCGTCCGCGCGGACCAGCTGGCCCAACACCTGAACAGCCACCTCGCGACGTACAAGCGGCTCAAGCCGTAG
Protein Sequence: MALCESQLDSALPQLKREENSHGSSDECKSPDKKPTMEPNGDIYGLDQVPGGLPLSVDYRSPVSHFVPPAVELYAARHKPEQISPPEPSVVTPIKRKRGRPRVDKTSPEYLANLAARKQAKEMAAVMNSRSPAIESGEKRKRGRPRVDKTSPEYLARKRARELEALERKAKREYKRRGTAAREHFRPTAKPVSVVPLKVGGNRVKKLPTAKKPIATPIRKAPPKLGARKVVDKQAMSIIRRNAKFIKRKDSAASSSAGETTPRVKRKYTKRAPSAKKNDAGGSTERVKGKRGRPRKTDQMTHKQGQQPKIRVRSNLMPVNTEPITLDSDDEPDLGSPSQASDSLSLDENLRALRHIHEKYANIDKDDLYEVSLYQDDLFEAHLLPANFKKPLSEQTQRIRDDDEVLSVRSSEGNASVKELDTRVEKLEDSSNSDSDSSSSGSGSSSSGSSSGSSSGSSSSSDSSDSSDDEAPKTEPPPQNNTSIEDDQSFGAWSYSGGNQSDASDSDPERAGDPGSIPRASEHDEISESDNESADKSFQCHICRKWYSTRVTLKIHRRIHQNRGGANSRARTRSSERYECDCCSETFSRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDAELAAHDRAHTPDERAGRCADCGAMFARYDQLRRHRACAHGASSANSKLPHACAQCGKRFGHAHSLTRHLQNHARQLYRCVVCKASFVRADQLAQHLNSHLATYKRLKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00075987;
90% Identity: -
80% Identity: -