Basic Information

Insect: Ostrinia furnacalis
Gene Symbol: ZIPIC
Assembly: GCA_004193835.1
Location: NW:26684-45445[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.2e-05 0.0016 18.6 0.8 1 23 284 306 284 306 0.99

2 11 0.0033 0.16 12.2 7.3 1 23 314 337 314 337 0.97

3 11 2.4 1.2e+02 3.2 1.2 1 23 341 364 341 366 0.84

4 11 5.7e-05 0.0028 17.8 2.5 1 23 440 462 440 462 0.99

5 11 0.0091 0.45 10.8 3.4 2 23 471 493 470 493 0.97

6 11 0.00048 0.024 14.9 1.5 1 23 524 547 524 547 0.97

7 11 0.0018 0.089 13.1 0.9 2 23 552 574 552 574 0.95

8 11 0.32 16 6.0 0.1 1 20 593 612 593 614 0.92

9 11 0.27 13 6.2 0.1 2 23 668 690 667 690 0.89

10 11 2.5e-06 0.00012 22.1 1.2 1 23 699 721 699 721 0.98

11 11 0.0001 0.0049 17.0 0.2 1 20 727 746 727 748 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.2e-05	0.0016	18.6	0.8	1	23	284	306	284	306	0.99
2	11	0.0033	0.16	12.2	7.3	1	23	314	337	314	337	0.97
3	11	2.4	1.2e+02	3.2	1.2	1	23	341	364	341	366	0.84
4	11	5.7e-05	0.0028	17.8	2.5	1	23	440	462	440	462	0.99
5	11	0.0091	0.45	10.8	3.4	2	23	471	493	470	493	0.97
6	11	0.00048	0.024	14.9	1.5	1	23	524	547	524	547	0.97
7	11	0.0018	0.089	13.1	0.9	2	23	552	574	552	574	0.95
8	11	0.32	16	6.0	0.1	1	20	593	612	593	614	0.92
9	11	0.27	13	6.2	0.1	2	23	668	690	667	690	0.89
10	11	2.5e-06	0.00012	22.1	1.2	1	23	699	721	699	721	0.98
11	11	0.0001	0.0049	17.0	0.2	1	20	727	746	727	748	0.95

Sequence Information

Coding Sequence: atgttGAATTTAAAGGCATGTGCCGCCTGCCTGAGCACTAACGTGACATTAATCAGTCTGGAAAGTGGAAAATTACGTGAACAATTCTACAAACTAACAGGGCTTcagAGTGCAAGATACGATGGGCTACCAgaatttttatgttttgaatGTGTTGGTTACGTGAAACGCTTTATCAAATTCCGAGATAAATGCCAGAGAGCACATTTTACCTTCAAGGAATTGCTACTccaaaataaagagATACAAAAATCAACTCTAGAAGCGATTAATCGGGAAGTTATTGGTATTGCGCCTTCACTGTCATACTTAAATCTAGACAAAGTTCACTATGAGCAAGCTAAGTTTTGTTGGGTTCATAACAACCGGTTATCGGTAAAACATAATGATGATATACCCATATTTACCTATGGGACACTATCTAAAGAGATCATGTTCGAGTCAAACAAAGTAAATGGAGATTTAACTGCTGAAAACTTAAAAGAAGATGACAAGgattcaattaatattaaagattTAGTTAAATTTCAAGATGACAATGAAGATCAGGACTTATATCAGCAATCAACATCTAGTCCTGCCAAAAATAAGATACGGACGGTGCTTGATTTTGAGGTTGACAGGTATCTTGATAGTGACAGTGATAGTAACACACTCGACACAGCAAATGATAGTAACACACTCGACACAGCAAATTATAGCAATACTATAGACGAGCCAAGTAAGCTGGAGAACAGTGTAGATGGGAGTGATCTCAACTTTGAATATGCAATAGTGAATCCAATATCGATGAAGGAAGCGAAAGCAGTAGTGGAGATATGCACGTTACTTTGTGATAAAAAAGACAGATATCGCTGTGACGTTTGCAATAAACCATACATTAGTGAAAAGAGGCTAAAGATTCACCAGCGTATGCATGATAAGtatGTAAGTGGTTTATTTGAATGTGAATTGTGCCATTATTGTTATAAGACTGACCATTTGTTGCAATCGCATATGAGGGAAAAGCATATGTTTAAATATATTTGTAGAAAGTGTCCTGAAGTTAGTTTTGAccgTTGCACAGCAAAGCAGCACTACTTAAATGTCCACGTGCAGAATGGCATAAGAAACAAAAATGCAAACTACCAACGCCCTGACTGGCTGGACAAAAGAGGTGGGAAACGTCAGAGAAACACCGTCCAAGAACCTGAAACTCACATTAAAAAGAGGAGAAAGAATCCCATTGATTTTCCAGTGTACACACCAATATCTCATAACGAACAGTATGAATTAATTCTCGCCAGAAAGATGACTAAAAATTATTTGGAGTCGCAGTATAAGTGTGAATTGTGCTTTAAAGGCTTCAGATCAGAGACTACCCTCAACACTCATTTGAAAAAACATGACCCGCAAATATCCGGGCCGCTACAATGTGATATGTGCAAGCTACACTTCCCGGAGAAACGGAAAATGTATAAACACATGCGGATGACTCACGTTTGCAAGTACTCGTGTCAATTGTGCAACTTTGAGTGTTTCAGTTTGGGCCAGTCAATCACACATTACAAGTGGCACAAAAACGTTATATACCCATGTCCTCACTGTGATAGAAAGTTTGAGAAGATATCGACCCAATTAACGCACATTCGGATCAAGCACCCGTCGACGAATGTGTGTAGCCTGTGTGGCCATAGCTTCGTGAGCGTGACCGGGCTACACAACCATATGGCCATCTCGCACACTAAAGAGGATGTAGAGTCTACCAAGACCGTAACAGTGGACAAATCCAGCCCGCATTACTGCGCTGAATGTGACGTCCAATTTGTGAGCGCGACGGCCTTCGATACACACCTGGGAAGTTCTAACAAGCATTCGACTATTAATAAGTCGATCCGCTCGCTGCGTCGCACACGGCGCAACCTCGGCCCGCGCGAGCGCGTCCCTCGcacgccgcgcccgcggcgCTCCCGACGCTCTTGGGCCGACATCATACACAACAACGGCGAGCAGACACCGACCACTTGTGAAGTGTGTGGCAAGTTCCTGCCAAACGACGTGCAAGCGAGGAAGCATTACGAGGCCGAGCACCCGGGCGCTGACTACTTGAAGCGGTACATGTGTGATGTTTGTGGACACACCACCAGGCAATACGCCAACTTGATGGTGCACATGCGAACGCACACGCGCGAGCGGCCCTACGAGTGCCCGCACTGCGACCGCCGCTTCTCCATGCCCAGCAACCGCGACCGGCACATCGTCGTGAGTATACAAAGATATAAGTAA
Protein Sequence: MLNLKACAACLSTNVTLISLESGKLREQFYKLTGLQSARYDGLPEFLCFECVGYVKRFIKFRDKCQRAHFTFKELLLQNKEIQKSTLEAINREVIGIAPSLSYLNLDKVHYEQAKFCWVHNNRLSVKHNDDIPIFTYGTLSKEIMFESNKVNGDLTAENLKEDDKDSINIKDLVKFQDDNEDQDLYQQSTSSPAKNKIRTVLDFEVDRYLDSDSDSNTLDTANDSNTLDTANYSNTIDEPSKLENSVDGSDLNFEYAIVNPISMKEAKAVVEICTLLCDKKDRYRCDVCNKPYISEKRLKIHQRMHDKYVSGLFECELCHYCYKTDHLLQSHMREKHMFKYICRKCPEVSFDRCTAKQHYLNVHVQNGIRNKNANYQRPDWLDKRGGKRQRNTVQEPETHIKKRRKNPIDFPVYTPISHNEQYELILARKMTKNYLESQYKCELCFKGFRSETTLNTHLKKHDPQISGPLQCDMCKLHFPEKRKMYKHMRMTHVCKYSCQLCNFECFSLGQSITHYKWHKNVIYPCPHCDRKFEKISTQLTHIRIKHPSTNVCSLCGHSFVSVTGLHNHMAISHTKEDVESTKTVTVDKSSPHYCAECDVQFVSATAFDTHLGSSNKHSTINKSIRSLRRTRRNLGPRERVPRTPRPRRSRRSWADIIHNNGEQTPTTCEVCGKFLPNDVQARKHYEAEHPGADYLKRYMCDVCGHTTRQYANLMVHMRTHTRERPYECPHCDRRFSMPSNRDRHIVVSIQRYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01125913;
90% Identity: iTF_01125913;
80% Identity: -