Basic Information

Insect: Ostrinia furnacalis
Gene Symbol: -
Assembly: GCA_004193835.1
Location: NW:1508169-1525302[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0049 0.24 11.7 0.4 1 23 255 278 255 278 0.97

2 16 0.0031 0.16 12.3 0.3 1 23 284 306 284 306 0.99

3 16 0.4 20 5.7 0.2 2 13 342 353 341 358 0.81

4 16 3.4e-06 0.00017 21.6 0.7 1 23 360 382 360 382 0.98

5 16 2.1e-05 0.001 19.2 2.0 1 23 421 444 421 444 0.94

6 16 0.025 1.2 9.5 3.0 1 23 450 472 450 473 0.95

7 16 1.3e-05 0.00065 19.8 3.0 1 23 481 503 481 503 0.98

8 16 0.0018 0.091 13.0 0.2 1 23 509 532 509 532 0.95

9 16 1 50 4.4 0.9 1 23 786 809 786 809 0.90

10 16 2.2 1.1e+02 3.4 4.3 1 23 815 837 815 837 0.97

11 16 1.4 69 4.0 0.7 1 23 841 864 841 864 0.92

12 16 0.0087 0.43 10.9 1.5 2 23 867 889 866 889 0.95

13 16 0.0054 0.26 11.6 7.0 1 23 892 914 892 915 0.96

14 16 0.0031 0.15 12.3 3.7 1 23 919 942 919 942 0.94

15 16 0.02 0.99 9.8 0.1 3 22 952 971 951 975 0.91

16 16 0.0011 0.054 13.7 1.5 1 23 985 1008 985 1008 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0049	0.24	11.7	0.4	1	23	255	278	255	278	0.97
2	16	0.0031	0.16	12.3	0.3	1	23	284	306	284	306	0.99
3	16	0.4	20	5.7	0.2	2	13	342	353	341	358	0.81
4	16	3.4e-06	0.00017	21.6	0.7	1	23	360	382	360	382	0.98
5	16	2.1e-05	0.001	19.2	2.0	1	23	421	444	421	444	0.94
6	16	0.025	1.2	9.5	3.0	1	23	450	472	450	473	0.95
7	16	1.3e-05	0.00065	19.8	3.0	1	23	481	503	481	503	0.98
8	16	0.0018	0.091	13.0	0.2	1	23	509	532	509	532	0.95
9	16	1	50	4.4	0.9	1	23	786	809	786	809	0.90
10	16	2.2	1.1e+02	3.4	4.3	1	23	815	837	815	837	0.97
11	16	1.4	69	4.0	0.7	1	23	841	864	841	864	0.92
12	16	0.0087	0.43	10.9	1.5	2	23	867	889	866	889	0.95
13	16	0.0054	0.26	11.6	7.0	1	23	892	914	892	915	0.96
14	16	0.0031	0.15	12.3	3.7	1	23	919	942	919	942	0.94
15	16	0.02	0.99	9.8	0.1	3	22	952	971	951	975	0.91
16	16	0.0011	0.054	13.7	1.5	1	23	985	1008	985	1008	0.90

Sequence Information

Coding Sequence: ATGGAAGTATTTTATTGCCAAGCATGTCTGAGCAAAGATCGTCGGATGTTCCCTCAGGAAAAAATCAAGGATTTGTTGGAAGACATCCATATTTTAGAGATAATGTATGATAAAAATGGCGTCATCTGTTGGGAGTGTTACCAAATAATACTAAAGTTCTCCAGATTCAAATTGCAAGTCTGCCAAGCCCAGAAAACCATGCACTTTTTGACAGAGGAATCAAGATGTTATAGCAACCTTTCAACAGTTAAAAAGAAGGGATATGACTTCAAATTCGTGTATCACTCCGATCCTCTCACGTCCGACATCGAAATCAAAACTGACATCAAACTGGAGTTGTCTGAAATTCGCGTCAATGACTCTAAAACGGGTGACATTAAGCAGTTAATGAGCGTTAAGAAATCAGATTTAAACGATGGGTCTTCAGAAATTGATATGTATGAAGGCAAAGCAAATGATGATATAAATAATGATACTGAGTCAATAAATGATGATTACGATGGAATTAATGATGTTTCAAGTAACGAAGCTAAAATTAACGACAATCCAACAGTATATGCTGATACATTAGAGCCTAAACTTACAGTAAAAAAAGAGCGACATAAAAGTGTAAAAGCGAAAGgagtcaaaagaaaatctgtcaaagttgAATTTAATGAAGAAGAATTGAATGAAAAGTTCGCTGTAGTTGTGTACACTGAAGAAGAAATGCAAAAGCTTAGAGAAGAGAAGAGAAGTCATCCCAATTTTAAGAAGATACCATATAAGTGCGAGAGCTGTGTGCTTGGGTTCACGAAGAAAGAGAACTTAGATGTACATTTGGAGAAGAATCATAATCAAAGTAACCTATACACCTGTGCCGTGTGTCTCTCGCGGTACTCGAACAAGGGACCTCTCTCTCGACATATCAGGTCTCACTATGCGCGATACAAGTGTACCTTCTGCGCTTACGAGACGCGCGAGGGTTGGGCCGCGTCGCGTCACTGTCGCGTCACGCACGCGTCAGATGCTACAGGGCGGTTACACTGCCCGCACTGTGGCAAGGAAACCAGTCGAATCCACGGCGTCAAAAGAGAGTTCGTCTGCGACATATGCAACAAACCTTTTAAAACGAAGACTCGACTGGAATCCCATATGGTGACACATAACGCGGCTCTCGCCAAGAAACTCGCTTACTGTGTGACGTGCCAAGTTCAGTATAAGAATATATACGTATACAGAAACCATCTGAAGAATAGCGCCAACCACTCCGAGAGGGCgtACCCGTGTCCGGAGTGCAAAAAGAAATTTGTGTCAAATGTGTACCTGAAGAAACACTACAACTTCTACCATCTGCAGAAATCACAATTCAACTGTGATATTTGTAATAAGCTGTTCATATCTGACTGGCGCTTGAAGAATCATAAACAAAAACATCATGGCCTCAGTCGACCCAGGGACCACACTTGCAATATCTGCGGGAAGAAATTCTTTACGCTGTCAACGCTCCGAGGCCACCAGCTCACGCATTCCCCGCGGCGCTCGTTCCTGTGTGAAGGTTGCGGAGACACGTTCAGACAGCGGCCGGCTCTGTATACTCATGTACGCCGCGTACATGGAGAGACAAACGGGAAACGGGGAGCGGGACCAACAAATCTGGGGGCGatggcaaAAATTATACTCAATACCGATGAAACTGATGGGCAGATGTTTTGCCACGTATGTTTAAGTTCTGACCGGACTCTGTTTCCTTTAGGAAAATACAGCGATGTGTATTACAATGCTTTCGGCAACTTTATCATGGCAGAATTTcctgttattttattatgttgggAATGTATAGCGATACTGAAGAAAATAGCATTATTTCAAGCAAAAATAGAACGTTCACAGAGAATCCTCCTTGCCCATTCTATTGATAATCAAACCCCTCTAACTACGTTAAGTAGTTTAACCACTACGTACCTTAATCCTGACCTCACATTACTATTTGTCGAAGACGCAGACGaaaaaacacaaattgaattaaacgtaaacaatgaaatatttaacaaagaCCTTGATAATAAGGATTTATTGCAAGATATCAAGGTGAAGGAAGAAGTTGATGACTGTGACAATGCCAATGATTTTGATTGCGAAAATACTGATTTACTCGATGAAATCAAAACTGAATtagaaaatgttaaagttgAAAACCCTCAAGTGgttaagaaaaagaaatatgCGAGTCGAACCAAAGACAGACCATACAAGGTAAATAAGAAAGTTCTGATGAAAGATCTAAAAGAAATGTGTAAAATAACATACATCGGATTCGATGAGATAAAAGAAATGTTGGAGAGAGAAAGAAATAGTTCGTATTATAAGATCCGGTACAAATGTAAGACTTGTGTTCTGGGCTGGTCAAGCAAAGAATACTTGGAACGTCATAATGTGAAGTTTCATAGTCAGTCTTCACCATACTCGTGTGATTTCTGCAACGCCCGTTTCGATTGCAAGCGCCGTCTGTCCACCCACATGGACCGACATCGCGAGGTGTTCGAGTGCCGGTCGTGCGGTCATCGGGCGTCGAGTCGAGAGCGAATCAGACGCCACCTGGCTGGTATGCATCGCGTCCGATGCAAAGGCTGCGAAGCTTCaTTCCGCACCGTCCGTTTATTCTTCAAACACTATAAGCAATACcatgaaatatttgtatgtGATTATTGCACGAAAAAATGCAAATCTAAAAGGAGTATTGAAAAGCATATAAAAAACCACCACGCGGTTAGCTACCGCTGCGACGAATGTTCTATCACGTTCAAAAGCAAAAAGTACTACAAAAGCCACAACGAGCGCAAACACGTGGTTTCTATGGGCGACGACGCGTACTGTGTGGAATGCGACAAGCAGTTCAAGAATGCGCTCTTGTACAGGGAACACGTTATGACGGGACCCGCGCATCGGCAGAATGGGGGGAAGAAGGGCATATTTCCATGTTCGGAGTGCGACAATACCTATGCTAGAAAAGAATCCTTGAAGAACCACCACGACTTCGTACACTTGAAGAAATCCAGGTTTAAATGCGTGGAGTGTAATAATAAGGTAtgccatcatcatcaacatcatcatttcagctac
Protein Sequence: MEVFYCQACLSKDRRMFPQEKIKDLLEDIHILEIMYDKNGVICWECYQIILKFSRFKLQVCQAQKTMHFLTEESRCYSNLSTVKKKGYDFKFVYHSDPLTSDIEIKTDIKLELSEIRVNDSKTGDIKQLMSVKKSDLNDGSSEIDMYEGKANDDINNDTESINDDYDGINDVSSNEAKINDNPTVYADTLEPKLTVKKERHKSVKAKGVKRKSVKVEFNEEELNEKFAVVVYTEEEMQKLREEKRSHPNFKKIPYKCESCVLGFTKKENLDVHLEKNHNQSNLYTCAVCLSRYSNKGPLSRHIRSHYARYKCTFCAYETREGWAASRHCRVTHASDATGRLHCPHCGKETSRIHGVKREFVCDICNKPFKTKTRLESHMVTHNAALAKKLAYCVTCQVQYKNIYVYRNHLKNSANHSERAYPCPECKKKFVSNVYLKKHYNFYHLQKSQFNCDICNKLFISDWRLKNHKQKHHGLSRPRDHTCNICGKKFFTLSTLRGHQLTHSPRRSFLCEGCGDTFRQRPALYTHVRRVHGETNGKRGAGPTNLGAMAKIILNTDETDGQMFCHVCLSSDRTLFPLGKYSDVYYNAFGNFIMAEFPVILLCWECIAILKKIALFQAKIERSQRILLAHSIDNQTPLTTLSSLTTTYLNPDLTLLFVEDADEKTQIELNVNNEIFNKDLDNKDLLQDIKVKEEVDDCDNANDFDCENTDLLDEIKTELENVKVENPQVVKKKKYASRTKDRPYKVNKKVLMKDLKEMCKITYIGFDEIKEMLERERNSSYYKIRYKCKTCVLGWSSKEYLERHNVKFHSQSSPYSCDFCNARFDCKRRLSTHMDRHREVFECRSCGHRASSRERIRRHLAGMHRVRCKGCEASFRTVRLFFKHYKQYHEIFVCDYCTKKCKSKRSIEKHIKNHHAVSYRCDECSITFKSKKYYKSHNERKHVVSMGDDAYCVECDKQFKNALLYREHVMTGPAHRQNGGKKGIFPCSECDNTYARKESLKNHHDFVHLKKSRFKCVECNNKVCHHHQHHHFSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -