Basic Information

Insect: Ostrinia furnacalis
Gene Symbol: -
Assembly: GCA_004193835.1
Location: NW:30232-44330[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.8e-06 0.00029 20.9 1.3 1 23 476 498 476 498 0.99

2 8 1e-06 5e-05 23.3 1.3 1 23 504 526 504 526 0.98

3 8 6.7e-06 0.00033 20.7 0.6 2 23 535 556 535 556 0.98

4 8 6.9e-06 0.00034 20.7 0.8 1 23 562 584 562 584 0.99

5 8 7.9e-08 3.9e-06 26.8 2.1 1 23 590 612 590 612 0.98

6 8 4.7e-07 2.3e-05 24.3 1.3 1 23 618 640 618 640 0.97

7 8 7.9e-05 0.0039 17.3 7.3 1 23 646 668 646 668 0.97

8 8 0.00013 0.0062 16.7 0.8 1 22 674 695 674 695 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.8e-06	0.00029	20.9	1.3	1	23	476	498	476	498	0.99
2	8	1e-06	5e-05	23.3	1.3	1	23	504	526	504	526	0.98
3	8	6.7e-06	0.00033	20.7	0.6	2	23	535	556	535	556	0.98
4	8	6.9e-06	0.00034	20.7	0.8	1	23	562	584	562	584	0.99
5	8	7.9e-08	3.9e-06	26.8	2.1	1	23	590	612	590	612	0.98
6	8	4.7e-07	2.3e-05	24.3	1.3	1	23	618	640	618	640	0.97
7	8	7.9e-05	0.0039	17.3	7.3	1	23	646	668	646	668	0.97
8	8	0.00013	0.0062	16.7	0.8	1	22	674	695	674	695	0.95

Sequence Information

Coding Sequence: ATGTGCGAATGGTTGTCGAGCGTGGAGTGGTGCGATGTGCGGCTGTCCTGTGGCGGTCGAACCTTCAACGCACATAAAGCCGTGTTGGCCAGCGTCAGCCACTTCCTTCGGAGAGTTCTACTGTCTTGCCCACAAGAAGAAACGCCGACGTTCATAGTCTTGCCTGAATTCGATCTCGACGCACTGTCTTCAGTACTGTATTATGTTTATAACGGGGAAGTCATCgtcaaaaaacaaaatcttcTTAAGTTCCTTGATGTCATTAAAGCACTAGAAATTTTTATTGATCAACAATACTTACAAAAGATTCGCGATAGCGTTGGAGACCTAGAACTGGGTCTTTGTACGTATCGTAAAAGTAAATGGTCAAAAAGAGTGTTTAACCTAACTGTTGGAAATAGTAATGAGCTCGAATATGTTAATATAAGGAAAGGAGAGCAGCTACAGGACATATGGTTACGATATTCGCAAACGGATTCAGATCTCGGCGATAAGCGAGAACGGCTTAGTTGGAGTGATGTTCAGCCTTCTTTAGACAACCCACCAGAGTCATATCGAGACCGACAAAGGAACTCTTTCCTACGTGATTTATATATCGAGACATATCCTCAGAACGGTAATGTTAACGGTCTGACGGGCGGCGTGCTAGCAATACCAAATGAACGCTATCGTGCACCGACATCTGTTCTCCTGACGAATGCAAATGGCAAGCTTCCCAGCAGAACTGACGACACGCTCTCAGAGATATCTAGGAAAACAACTGAACACACATCCTATGTATCCAACGCCACTCGCACTCCACAACTTTGCATACAAGATTGCGCTCGACTGTACAGCGATGCCTGTTCAAAAATGCACCATAATTTGGGTTTATTTCAAAGTACAGACTTGATAAATAATAAGAGACTTATAGATAATAGCTACAATTTGAGTGCACATTTAAAGAATCCTTGGTTAAGTTGTTATCCTTCTCAATTAAGTGCACAAAAAGTGCAAACAGGAATTCCGAATAATCTGTCTATGCCTAAAATGATCATGCCTTCCTTAGATCTCAGTCAAAATAGATCGCTTCTGGATTCTAAATTAACTGCACATGCACAGCCATTGACACCAGAAATACTGTATAGTAGAAGTCCGAGTAAATTATCATGTAAATATCCCATAGCTAAAGACAGTACCGTCGGAAGTAAGTCATTAAAGGAACCAATTTTTAATCAAGTGCTAGATAGTCCGTGGTGTCCACGATTACCATACGATTACAAACCATTCCGAAGAAAACTCAACAATGAAACGGAATCCGAGATACTAAAAAAGAAGGAGAATGAGGTGGCCATTGTAAACGATAGTAACAATAATATTGAAGAATCTTTAATACCAAGTACATGTAACAAGTTGGAAAATGTTACTGCCGTTACCAGAGAAGAGTTCAAATGTAACTTGTGTAGCCAGGTATTCACAACTTCCGAATCGTTGGAAGTCCACACGAAGCGTCACACGGTGGTTGCGCGGTACTCGTGCGCAGAGTGCGGCAAAACGTTCTCTCAGCTGCGCAACTTCAAATACCACATGTCTGTCCACCGCGGTACCAGGGAGTTCGCAGCAACCTGTACTGTGTGTGGGAAGTACTTCAATGATAGAGGCTATCTGAGCAGCCACATGAAGATACATAGAAATCGCAAGGAATACAAGTGCTCGCAGTGCCCGAAGTCGTTCAACCAGCGCGTCGCATACAATATGCACGTCAGGATCCACACAGGTGTAAAACCCCACGTTTGCGAAGAGTGTGGAAAGGCGTTCTCCCGCAAAATGCTTTTGAAGCAGCACCAGAGGACCCATTCCGGAGAGAGGCCGTACGCTTGCCCGCACTGCGATAAGCGCTTCGCTGACAGATCAAATATGACCTTGCATCTTCGGCTGCACACTGGTATCAAACCATTCTCCTGCACGCTGTGTCCAAAATCATTCACGAAGAAGCATCACCTAAAATCGCACCTGAACTTCCACACGGGCGCCAAGCCTTACTCGTGCCCGCGCTGCCGCCTCGCCTTCACGCAGTCCTCAAACATGAGAACGCACCTCAAGAAGTGTAGCGCGCCTGAAGACAGTGCTGTGTCCACCTAA
Protein Sequence: MCEWLSSVEWCDVRLSCGGRTFNAHKAVLASVSHFLRRVLLSCPQEETPTFIVLPEFDLDALSSVLYYVYNGEVIVKKQNLLKFLDVIKALEIFIDQQYLQKIRDSVGDLELGLCTYRKSKWSKRVFNLTVGNSNELEYVNIRKGEQLQDIWLRYSQTDSDLGDKRERLSWSDVQPSLDNPPESYRDRQRNSFLRDLYIETYPQNGNVNGLTGGVLAIPNERYRAPTSVLLTNANGKLPSRTDDTLSEISRKTTEHTSYVSNATRTPQLCIQDCARLYSDACSKMHHNLGLFQSTDLINNKRLIDNSYNLSAHLKNPWLSCYPSQLSAQKVQTGIPNNLSMPKMIMPSLDLSQNRSLLDSKLTAHAQPLTPEILYSRSPSKLSCKYPIAKDSTVGSKSLKEPIFNQVLDSPWCPRLPYDYKPFRRKLNNETESEILKKKENEVAIVNDSNNNIEESLIPSTCNKLENVTAVTREEFKCNLCSQVFTTSESLEVHTKRHTVVARYSCAECGKTFSQLRNFKYHMSVHRGTREFAATCTVCGKYFNDRGYLSSHMKIHRNRKEYKCSQCPKSFNQRVAYNMHVRIHTGVKPHVCEECGKAFSRKMLLKQHQRTHSGERPYACPHCDKRFADRSNMTLHLRLHTGIKPFSCTLCPKSFTKKHHLKSHLNFHTGAKPYSCPRCRLAFTQSSNMRTHLKKCSAPEDSAVST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01125700;
90% Identity: iTF_01125700;
80% Identity: iTF_01124751;