Basic Information

Gene Symbol
-
Assembly
GCA_004193835.1
Location
NW:46056-49017[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.31 2.3e+02 1.8 0.0 22 34 233 246 224 257 0.83
2 5 8e-08 6e-05 22.8 0.0 1 45 264 310 264 311 0.94
3 5 6e-11 4.5e-08 32.8 0.4 2 46 318 366 317 366 0.94
4 5 2.8e-12 2.1e-09 37.1 0.0 1 43 370 412 370 414 0.97
5 5 5.9e-09 4.5e-06 26.4 0.0 3 45 422 465 420 466 0.95

Sequence Information

Coding Sequence
ATGGATAACGACATAGAAAGCGAAGACGACGATGAAACTCAACAACTGAGGGATTTGCAGAATTTGGAAGCAGTATTAGAAGATGAAAATGCTGGCAGCTGTGCTACTTCCAGGTGTTCAGAGCCAAGTATAATACTTTCGGGTGGTGTGCGTATTCCGGCGTCTTCTCTCGACTCGTTTACGAGAATCGAAACTGCACTTGCTCTAAATAAACTCACAGAAATGAGGCTTCAACGACTTGAAGGTATACTTGTAAATCGTTTCAAACAGAGCACTGGAAAAATAACAGAAATTCAGTCTTCGTATGTCAACATCGAGAAGTATACCAGGCCTACAAAGTTCAGCTTTATTAGCTGTGGAAAGCCATATTTTAAAGATTCTCATAATTTCCCTGCACCAGATAACAGTGATACAATATTGATGAGAAAGTCGGGTATGTACGACTTTTCTTGCGTGGCCTCCGTGCCCGGATGGACTGTGAAAGACAAGAGTGAATTCATTTCATCCATGCTCAAAATGTCAAAAGCTATAAAGATAAAAGAACTCAATTCAAAATTGGCTGAATTCCGACGTGACAATAATATACCTGAAGAAAGGAAATCCAAACTAGTTAAAGCTCTTCAATCAGAAATTAAGTCGGTGGGTAAAAAGTCACTTGATCAATTAGCTTTGCCGTTAAGTTCAGACTTTGACTATGATTGGGAAACTATTGCCAACAAGTTGAACCATAGACACAGTCCGCAAGAATACGCCTCATTATGGAAGTTGTACATGCATCCATCCATTAATAAAGAATGTTGGACTGTAACTGAACATGTAGCGTTGCAACGTCTCGCTCATGTCCATCGATTACAAGACTGGGAATCCGTAGCAGCACAACTGAACACTGACCGTACTGGCTATcaggtttttgtttattttcgcaCTAACATGACTAACACTTTATCGGGAAATAAATggacaaaagaagaagaagcataTCTCAAAAGGCTCATAGAATTTTATCGTGAAGACAACTACATTCCGTGGTCGAGAATTGCCGCATGTATGGAGAATAGAACGAAAATTcagatttataataagtatctCAGACTGTTGGAATTAAGGAAAGGTCGGTTCCTGACCGAAGAAGATGCAGTCATTCTAACTGGCATTGAAAAGTATGGGacaaattttaagaaaattgctGAATTTCTACCTGGCAGGTCTCAGTCTCAATTAAGGTATCGGTACAAAGTAATAGCAAAACAGCAAATGTCTACTGTGTGGACAATATCGGAAGACAAAAAATTAATGCATTTGATAAATAAAGATGGTAATTCAAATTTTGCTAGCATTGCCAAAGATTTTGTTGGTAAAGACCGTGTTAGCATTCGAGCGAGATATATTACATTGATGAAATGGATGAAACGAAACCCTAATGTAGACATTATTTACGCGCCACGCCGCGGTGCGCGGCGCTTGTTCCATGGCCAAGCTACGGCTAATTTGAATACCGCGATTGATGATCTGAAAAGGAGAATGGAATCTGAACTGGAGACAAAAAAAGCAACAAGAATCACAAAGGAATCGACAGAGGAAGAAATAGATGATGCTATCGTAGCTACTCTTACCACAATAATGGttaaagaagaagaagctcATAGAGAGAAGATGGCTGATAAGCTGATTTTGGAAGATGATGTAGTAATCTCACATAATCAACTTAATGCGACAAATTTACAAAAATgccttattttgttaaaatcagGCATAAGCAAACAACAATTTACATCAAGTAAATATGCCAAAAGATATCCTGAACTGTTAATCCCTGAGAAACAAGTGTCTTTAGTCAAAGTGAAGTCATATTCAAGAAAAGATGCGAGCAACACTATAAACATTAAATCTCCACCCAATATATGGGGTGAAAATGTATTGACAAACACAGAGTATGTATTTCCTCCTCACTACACTACGATAACTGGATGCAGGGCATTGTTAGCCCATACTTCGGTGGGAGATTCATTACCAAAGGTTGATTTGAACTTATTGAAAGcaagaaatgttttgtttaaagaGAACATGACTCTTTTGATGGAACGTTTTAACAGTTTGTTCTTGTGGCCTATGTTGCTATCAAATGAACATCCGAATAGCGATCAGATGACTGAGTTTTATAACCCGGCTGCCAGAAGAATTCAGCCATTGCTTGCATTGCCTTCCACGTCAGGAATGGAGCAAAAAACGTTACCTACAGTTAAAGAACAAAGTTCTTCttgcagtaaaaataaacaaccacaaattaaaaagaagaaaagaaagtag
Protein Sequence
MDNDIESEDDDETQQLRDLQNLEAVLEDENAGSCATSRCSEPSIILSGGVRIPASSLDSFTRIETALALNKLTEMRLQRLEGILVNRFKQSTGKITEIQSSYVNIEKYTRPTKFSFISCGKPYFKDSHNFPAPDNSDTILMRKSGMYDFSCVASVPGWTVKDKSEFISSMLKMSKAIKIKELNSKLAEFRRDNNIPEERKSKLVKALQSEIKSVGKKSLDQLALPLSSDFDYDWETIANKLNHRHSPQEYASLWKLYMHPSINKECWTVTEHVALQRLAHVHRLQDWESVAAQLNTDRTGYQVFVYFRTNMTNTLSGNKWTKEEEAYLKRLIEFYREDNYIPWSRIAACMENRTKIQIYNKYLRLLELRKGRFLTEEDAVILTGIEKYGTNFKKIAEFLPGRSQSQLRYRYKVIAKQQMSTVWTISEDKKLMHLINKDGNSNFASIAKDFVGKDRVSIRARYITLMKWMKRNPNVDIIYAPRRGARRLFHGQATANLNTAIDDLKRRMESELETKKATRITKESTEEEIDDAIVATLTTIMVKEEEAHREKMADKLILEDDVVISHNQLNATNLQKCLILLKSGISKQQFTSSKYAKRYPELLIPEKQVSLVKVKSYSRKDASNTINIKSPPNIWGENVLTNTEYVFPPHYTTITGCRALLAHTSVGDSLPKVDLNLLKARNVLFKENMTLLMERFNSLFLWPMLLSNEHPNSDQMTEFYNPAARRIQPLLALPSTSGMEQKTLPTVKEQSSSCSKNKQPQIKKKKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01125415;
90% Identity
iTF_01125415;
80% Identity
-